RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 OR10P1Q8NGE3 313 aa13.59□□□□□ -0.23
SQSTM1-215ENST00000514093 SMIM8Q96KF7 97 aa13.59□□□□□ -0.23
SQSTM1-215ENST00000514093 FAM19A4Q96LR4 140 aa13.59□□□□□ -0.23
SQSTM1-215ENST00000514093 AGPAT4-IT1Q9H0P7 198 aa13.59□□□□□ -0.23
SQSTM1-215ENST00000514093 RSL24D1Q9UHA3 163 aaKnown RBP13.59□□□□□ -0.23
SQSTM1-215ENST00000514093 RGS13O14921 159 aa13.58□□□□□ -0.24
SQSTM1-215ENST00000514093 OR4E1P0C645 316 aa13.58□□□□□ -0.24
SQSTM1-215ENST00000514093 GYPEP15421 78 aa13.58□□□□□ -0.24
SQSTM1-215ENST00000514093 ARL16Q0P5N6 197 aa13.58□□□□□ -0.24
SQSTM1-215ENST00000514093 IBA57Q5T440 356 aaKnown RBP13.58□□□□□ -0.24
SQSTM1-215ENST00000514093 MGST2Q99735 147 aa13.58□□□□□ -0.24
SQSTM1-215ENST00000514093 RCL1Q9Y2P8 373 aaKnown RBP13.58□□□□□ -0.24
SQSTM1-215ENST00000514093 FAT3Q8TDW7 4589 aa13.57□□□□□ -0.24
SQSTM1-215ENST00000514093 FNDC10F2Z333 226 aa13.57□□□□□ -0.24
SQSTM1-215ENST00000514093 GPX1P07203 203 aa13.57□□□□□ -0.24
SQSTM1-215ENST00000514093 C4orf46Q504U0 113 aa13.57□□□□□ -0.24
SQSTM1-215ENST00000514093 PRR9Q5T870 116 aa13.57□□□□□ -0.24
SQSTM1-215ENST00000514093 C10orf126Q8N4M7 172 aa13.57□□□□□ -0.24
SQSTM1-215ENST00000514093 MCFD2Q8NI22 146 aa13.57□□□□□ -0.24
SQSTM1-215ENST00000514093 RAB2BQ8WUD1 216 aa13.57□□□□□ -0.24
SQSTM1-215ENST00000514093 ZNF479Q96JC4 524 aa13.57□□□□□ -0.24
SQSTM1-215ENST00000514093 PLA2G2DQ9UNK4 145 aa13.57□□□□□ -0.24
SQSTM1-215ENST00000514093 FAUP35544 74 aaKnown RBP13.56□□□□□ -0.24
SQSTM1-215ENST00000514093 GUK1Q16774 197 aa13.56□□□□□ -0.24
SQSTM1-215ENST00000514093 PCNPQ8WW12 178 aaKnown RBP13.56□□□□□ -0.24
SQSTM1-215ENST00000514093 LINC00477Q96M19 166 aa13.56□□□□□ -0.24
SQSTM1-215ENST00000514093 Q9HAA7 133 aa13.56□□□□□ -0.24
SQSTM1-215ENST00000514093 DNAJC4Q9NNZ3 241 aa13.56□□□□□ -0.24
SQSTM1-215ENST00000514093 IGHV1OR15-1A0A075B7D0 117 aa13.55□□□□□ -0.24
SQSTM1-215ENST00000514093 FABP12A6NFH5 140 aa13.55□□□□□ -0.24
SQSTM1-215ENST00000514093 SCGB1D2O95969 90 aa13.55□□□□□ -0.24
SQSTM1-215ENST00000514093 ARPC5LQ9BPX5 153 aa13.55□□□□□ -0.24
SQSTM1-215ENST00000514093 SOSTQ9BQB4 213 aa13.55□□□□□ -0.24
SQSTM1-215ENST00000514093 SMIM18P0DKX4 95 aa13.54□□□□□ -0.24
SQSTM1-215ENST00000514093 SLC25A21Q9BQT8 299 aaPredicted RBP13.54□□□□□ -0.24
SQSTM1-215ENST00000514093 C1QBP02746 253 aa13.53□□□□□ -0.24
SQSTM1-215ENST00000514093 TNFSF8P32971 234 aa13.53□□□□□ -0.24
SQSTM1-215ENST00000514093 MIC13Q5XKP0 118 aa13.53□□□□□ -0.24
SQSTM1-215ENST00000514093 TOMM5Q8N4H5 51 aa13.53□□□□□ -0.24
SQSTM1-215ENST00000514093 ZFAND2AQ8N6M9 145 aa13.53□□□□□ -0.24
SQSTM1-215ENST00000514093 TRBV19A0A075B6N1 114 aa13.52□□□□□ -0.25
SQSTM1-215ENST00000514093 IGHV3-38A0A0C4DH36 116 aa13.52□□□□□ -0.25
SQSTM1-215ENST00000514093 LOC100131303A0A0U1RQF7 123 aa13.52□□□□□ -0.25
SQSTM1-215ENST00000514093 CRISP2P16562 243 aa13.52□□□□□ -0.25
SQSTM1-215ENST00000514093 IQCF2Q8IXL9 164 aa13.52□□□□□ -0.25
SQSTM1-215ENST00000514093 EXOC3-AS1Q8N2X6 119 aa13.52□□□□□ -0.25
SQSTM1-215ENST00000514093 MRPL53Q96EL3 112 aaKnown RBP13.52□□□□□ -0.25
SQSTM1-215ENST00000514093 TXNDC17Q9BRA2 123 aa13.52□□□□□ -0.25
SQSTM1-215ENST00000514093 IGKV2-40A0A087WW87 121 aaPredicted RBP13.51□□□□□ -0.25
SQSTM1-215ENST00000514093 C9orf170A2RU37 121 aa13.51□□□□□ -0.25
SQSTM1-215ENST00000514093 IBA57-AS1B1ANH7 110 aa13.51□□□□□ -0.25
SQSTM1-215ENST00000514093 NDUFB4O95168 129 aa13.51□□□□□ -0.25
SQSTM1-215ENST00000514093 IGKV2D-40P01614 121 aaPredicted RBP13.51□□□□□ -0.25
SQSTM1-215ENST00000514093 ORM1P02763 201 aa13.51□□□□□ -0.25
SQSTM1-215ENST00000514093 CAMLGP49069 296 aa13.51□□□□□ -0.25
SQSTM1-215ENST00000514093 WFDC2Q14508 124 aa13.51□□□□□ -0.25
SQSTM1-215ENST00000514093 Q6ZRG5 221 aa13.51□□□□□ -0.25
SQSTM1-215ENST00000514093 Q6ZSA8 131 aa13.51□□□□□ -0.25
SQSTM1-215ENST00000514093 TRIM63Q969Q1 353 aa13.51□□□□□ -0.25
SQSTM1-215ENST00000514093 TSC22D2O75157 780 aa13.5□□□□□ -0.25
SQSTM1-215ENST00000514093 ZNF253O75346 499 aa13.5□□□□□ -0.25
SQSTM1-215ENST00000514093 MUC21Q5SSG8 566 aa13.5□□□□□ -0.25
SQSTM1-215ENST00000514093 NRARPQ7Z6K4 114 aa13.5□□□□□ -0.25
SQSTM1-215ENST00000514093 DYNC2LI1Q8TCX1 351 aa13.5□□□□□ -0.25
SQSTM1-215ENST00000514093 BLNKQ8WV28 456 aa13.5□□□□□ -0.25
SQSTM1-215ENST00000514093 AP3S2P59780 193 aa13.49□□□□□ -0.25
SQSTM1-215ENST00000514093 C9orf47Q6ZRZ4 202 aa13.49□□□□□ -0.25
SQSTM1-215ENST00000514093 OR10G4Q8NGN3 311 aa13.49□□□□□ -0.25
SQSTM1-215ENST00000514093 GGACTQ9BVM4 153 aa13.49□□□□□ -0.25
SQSTM1-215ENST00000514093 TIMM9Q9Y5J7 89 aa13.49□□□□□ -0.25
SQSTM1-215ENST00000514093 C9JCJ5 164 aa13.48□□□□□ -0.25
SQSTM1-215ENST00000514093 PYYP10082 97 aa13.48□□□□□ -0.25
SQSTM1-215ENST00000514093 LINC01620Q4KN68 170 aa13.48□□□□□ -0.25
SQSTM1-215ENST00000514093 PYDC2Q56P42 97 aa13.48□□□□□ -0.25
SQSTM1-215ENST00000514093 LINC01556Q5JQF7 62 aa13.48□□□□□ -0.25
SQSTM1-215ENST00000514093 TMEM78Q5T7P6 136 aa13.48□□□□□ -0.25
SQSTM1-215ENST00000514093 NHLRC2Q8NBF2 726 aa13.48□□□□□ -0.25
SQSTM1-215ENST00000514093 OR1L4Q8NGR5 311 aa13.48□□□□□ -0.25
SQSTM1-215ENST00000514093 SRRQ9GZT4 340 aa13.48□□□□□ -0.25
SQSTM1-215ENST00000514093 GSKIPQ9P0R6 139 aa13.48□□□□□ -0.25
SQSTM1-215ENST00000514093 PRELID1Q9Y255 219 aa13.48□□□□□ -0.25
SQSTM1-215ENST00000514093 IGHV3-30P01768 117 aa13.47□□□□□ -0.25
SQSTM1-215ENST00000514093 IGHV3-33P01772 117 aa13.47□□□□□ -0.25
SQSTM1-215ENST00000514093 NMBP08949 121 aa13.47□□□□□ -0.25
SQSTM1-215ENST00000514093 IGHV3-30-3P0DP02 117 aa13.47□□□□□ -0.25
SQSTM1-215ENST00000514093 IGHV3-30-5P0DP03 117 aa13.47□□□□□ -0.25
SQSTM1-215ENST00000514093 PPT1P50897 306 aa13.47□□□□□ -0.25
SQSTM1-215ENST00000514093 TAS2R30P59541 319 aa13.47□□□□□ -0.25
SQSTM1-215ENST00000514093 FAM122CQ6P4D5 195 aa13.47□□□□□ -0.25
SQSTM1-215ENST00000514093 SLC25A31Q9H0C2 315 aa13.47□□□□□ -0.25
SQSTM1-215ENST00000514093 ZNF492Q9P255 531 aa13.47□□□□□ -0.25
SQSTM1-215ENST00000514093 C7orf66A4D0T2 115 aa13.46□□□□□ -0.25
SQSTM1-215ENST00000514093 LECT2O14960 151 aa13.46□□□□□ -0.25
SQSTM1-215ENST00000514093 OXTP01178 125 aa13.46□□□□□ -0.25
SQSTM1-215ENST00000514093 HIST1H1EP10412 219 aaKnown RBP13.46□□□□□ -0.25
SQSTM1-215ENST00000514093 KRTAP10-4P60372 401 aaPredicted RBP13.46□□□□□ -0.25
SQSTM1-215ENST00000514093 RAB31Q13636 194 aa13.46□□□□□ -0.25
SQSTM1-215ENST00000514093 IAH1Q2TAA2 248 aaPredicted RBP13.46□□□□□ -0.25
SQSTM1-215ENST00000514093 SCXQ7RTU7 201 aa13.46□□□□□ -0.25
SQSTM1-215ENST00000514093 Q8TAT8 98 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms