RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 UNQ6190/PRO20217Q6UXQ8 127 aa2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 PATE2Q6UY27 113 aa2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 FAM24BQ8N5W8 94 aa2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 C12orf29Q8N999 325 aa2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 SLC25A21Q9BQT8 299 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 MAP1LC3BQ9GZQ8 125 aa2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 POPDC3Q9HBV1 291 aa2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 ANKRD31Q8N7Z5 1873 aa2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 AFDNP55196 1824 aaKnown RBP2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 DLEC1Q9Y238 1755 aa2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 COL4A1P02462 1669 aa2.02□□□□□ -2.09
HMGB1P47-201ENST00000511281 SCN8AQ9UQD0 1980 aa2.01□□□□□ -2.09
HMGB1P47-201ENST00000511281 SIPA1L3O60292 1781 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P47-201ENST00000511281 BCORQ6W2J9 1755 aa2.01□□□□□ -2.09
HMGB1P47-201ENST00000511281 TRAV14DV4A0A0A6YYC5 116 aa2.01□□□□□ -2.09
HMGB1P47-201ENST00000511281 C1orf140Q5VVS0 124 aa2.01□□□□□ -2.09
HMGB1P47-201ENST00000511281 LINC00301Q8NCQ3 95 aa2.01□□□□□ -2.09
HMGB1P47-201ENST00000511281 OR10K1Q8NGX5 313 aa2.01□□□□□ -2.09
HMGB1P47-201ENST00000511281 COL1A1P02452 1464 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P47-201ENST00000511281 TRAV3A0A0B4J244 114 aa2□□□□□ -2.09
HMGB1P47-201ENST00000511281 GADD45GO95257 159 aa2□□□□□ -2.09
HMGB1P47-201ENST00000511281 EIF5AL1Q6IS14 154 aaKnown RBP2□□□□□ -2.09
HMGB1P47-201ENST00000511281 PHF5AQ7RTV0 110 aaKnown RBP2□□□□□ -2.09
HMGB1P47-201ENST00000511281 SMIM15Q7Z3B0 74 aa2□□□□□ -2.09
HMGB1P47-201ENST00000511281 SFT2D1Q8WV19 159 aa2□□□□□ -2.09
HMGB1P47-201ENST00000511281 NPCDR1Q9BY65 106 aa2□□□□□ -2.09
HMGB1P47-201ENST00000511281 OR52A1Q9UKL2 312 aa2□□□□□ -2.09
HMGB1P47-201ENST00000511281 FER1L6Q2WGJ9 1857 aa2□□□□□ -2.09
HMGB1P47-201ENST00000511281 INTS1Q8N201 2190 aaKnown RBP2□□□□□ -2.09
HMGB1P47-201ENST00000511281 VIRMAQ69YN4 1812 aaKnown RBP2□□□□□ -2.09
HMGB1P47-201ENST00000511281 KDM3BQ7LBC6 1761 aa2□□□□□ -2.09
HMGB1P47-201ENST00000511281 A0A1W2PRE2 83 aa1.99□□□□□ -2.09
HMGB1P47-201ENST00000511281 DHFRP00374 187 aa1.99□□□□□ -2.09
HMGB1P47-201ENST00000511281 IFNA21P01568 189 aa1.99□□□□□ -2.09
HMGB1P47-201ENST00000511281 BRS3P32247 399 aa1.99□□□□□ -2.09
HMGB1P47-201ENST00000511281 ROMO1P60602 79 aa1.99□□□□□ -2.09
HMGB1P47-201ENST00000511281 PLCXD2Q0VAA5 305 aa1.99□□□□□ -2.09
HMGB1P47-201ENST00000511281 DEFB115Q30KQ5 88 aa1.99□□□□□ -2.09
HMGB1P47-201ENST00000511281 DEFB113Q30KQ7 82 aa1.99□□□□□ -2.09
HMGB1P47-201ENST00000511281 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P47-201ENST00000511281 DEFB119Q8N690 84 aa1.99□□□□□ -2.09
HMGB1P47-201ENST00000511281 ARFGEF2Q9Y6D5 1785 aa1.99□□□□□ -2.09
HMGB1P47-201ENST00000511281 DIDO1Q9BTC0 2240 aaKnown RBP1.99□□□□□ -2.09
HMGB1P47-201ENST00000511281 LAMB4A4D0S4 1761 aa1.98□□□□□ -2.09
HMGB1P47-201ENST00000511281 H0YJX3 145 aa1.98□□□□□ -2.09
HMGB1P47-201ENST00000511281 PRB1P04280 392 aa1.98□□□□□ -2.09
HMGB1P47-201ENST00000511281 RAB4BP61018 213 aa1.98□□□□□ -2.09
HMGB1P47-201ENST00000511281 FKBP1CQ5VVH2 108 aa1.98□□□□□ -2.09
HMGB1P47-201ENST00000511281 PRR15Q8IV56 129 aa1.98□□□□□ -2.09
HMGB1P47-201ENST00000511281 OR4C6Q8NH72 309 aa1.98□□□□□ -2.09
HMGB1P47-201ENST00000511281 PPTC7Q8NI37 304 aa1.98□□□□□ -2.09
HMGB1P47-201ENST00000511281 CARD19Q96LW7 228 aa1.98□□□□□ -2.09
HMGB1P47-201ENST00000511281 NUBP2Q9Y5Y2 271 aa1.98□□□□□ -2.09
HMGB1P47-201ENST00000511281 CEP350Q5VT06 3117 aa1.98□□□□□ -2.09
HMGB1P47-201ENST00000511281 DUOX1Q9NRD9 1551 aa1.98□□□□□ -2.09
HMGB1P47-201ENST00000511281 PLIN4Q96Q06 1357 aa1.98□□□□□ -2.09
HMGB1P47-201ENST00000511281 RTL8BQ17RB0 113 aa1.97□□□□□ -2.09
HMGB1P47-201ENST00000511281 C1orf137Q5JT78 98 aa1.97□□□□□ -2.09
HMGB1P47-201ENST00000511281 TOMM20LQ6UXN7 152 aa1.97□□□□□ -2.09
HMGB1P47-201ENST00000511281 REG4Q9BYZ8 158 aa1.97□□□□□ -2.09
HMGB1P47-201ENST00000511281 ASB4Q9Y574 426 aa1.97□□□□□ -2.09
HMGB1P47-201ENST00000511281 NUP98P52948 1817 aa1.96□□□□□ -2.1
HMGB1P47-201ENST00000511281 LAMB2P55268 1798 aa1.96□□□□□ -2.1
HMGB1P47-201ENST00000511281 DLG5Q8TDM6 1919 aa1.96□□□□□ -2.1
HMGB1P47-201ENST00000511281 UQCRHLA0A096LP55 91 aa1.96□□□□□ -2.1
HMGB1P47-201ENST00000511281 PFDN1O60925 122 aa1.96□□□□□ -2.1
HMGB1P47-201ENST00000511281 UQCRHP07919 91 aa1.96□□□□□ -2.1
HMGB1P47-201ENST00000511281 C15orf53Q8NAA6 179 aa1.96□□□□□ -2.1
HMGB1P47-201ENST00000511281 C6orf62Q9GZU0 229 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P47-201ENST00000511281 CHCHD2Q9Y6H1 151 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P47-201ENST00000511281 LY96Q9Y6Y9 160 aa1.96□□□□□ -2.1
HMGB1P47-201ENST00000511281 LRRC37AA6NMS7 1700 aa1.96□□□□□ -2.1
HMGB1P47-201ENST00000511281 DDX60Q8IY21 1712 aaKnown RBP1.96□□□□□ -2.1
HMGB1P47-201ENST00000511281 MYH10P35580 1976 aa1.96□□□□□ -2.1
HMGB1P47-201ENST00000511281 E7EQ34 232 aa1.95□□□□□ -2.1
HMGB1P47-201ENST00000511281 CXCL1P09341 107 aa1.95□□□□□ -2.1
HMGB1P47-201ENST00000511281 ARPP19P56211 112 aa1.95□□□□□ -2.1
HMGB1P47-201ENST00000511281 CNBPP62633 177 aaKnown RBP1.95□□□□□ -2.1
HMGB1P47-201ENST00000511281 CDK5R1Q15078 307 aa1.95□□□□□ -2.1
HMGB1P47-201ENST00000511281 DYDC1Q8WWB3 177 aa1.95□□□□□ -2.1
HMGB1P47-201ENST00000511281 ISOC1Q96CN7 298 aa1.95□□□□□ -2.1
HMGB1P47-201ENST00000511281 OR2H1Q9GZK4 316 aa1.95□□□□□ -2.1
HMGB1P47-201ENST00000511281 MED11Q9P086 117 aa1.95□□□□□ -2.1
HMGB1P47-201ENST00000511281 RNF11Q9Y3C5 154 aa1.95□□□□□ -2.1
HMGB1P47-201ENST00000511281 ANKRD36CQ5JPF3 1778 aa1.95□□□□□ -2.1
HMGB1P47-201ENST00000511281 ARFGEF3Q5TH69 2177 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 A0A087WSZ3 146 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 PVALEFA0A1B0GWK0 134 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 HCRTO43612 131 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 HYPMO75409 117 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 NBEAP1P0C6P0 100 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 TMBIM6P55061 237 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 DSCR4P56555 118 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 TAC4Q86UU9 113 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 ANGPTL5Q86XS5 388 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 ST6GALNAC3Q8NDV1 305 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 C4orf3Q8WVX3 66 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 CCDC32Q9BV29 185 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms