RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 PACRGQ96M98 296 aaPredicted RBP3.35□□□□□ -1.87
UBE2D3-230ENST00000510599 HIST1H2BLQ99880 126 aa3.35□□□□□ -1.87
UBE2D3-230ENST00000510599 HSPB9Q9BQS6 159 aa3.35□□□□□ -1.87
UBE2D3-230ENST00000510599 NAT8BQ9UHF3 227 aa3.35□□□□□ -1.87
UBE2D3-230ENST00000510599 RABAC1Q9UI14 185 aa3.35□□□□□ -1.87
UBE2D3-230ENST00000510599 SOX21Q9Y651 276 aaPredicted RBP3.35□□□□□ -1.87
UBE2D3-230ENST00000510599 SPTBN1Q01082 2364 aaKnown RBP3.35□□□□□ -1.87
UBE2D3-230ENST00000510599 ATRXP46100 2492 aa3.35□□□□□ -1.87
UBE2D3-230ENST00000510599 IGHV4-30-2A0A087WSY4 118 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 A0A087X0K7 114 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 TRAV41A0A0B4J266 112 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 TRAV34A0A0B4J273 112 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 A6NDX4 124 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 OR2T8A6NH00 312 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 A8MWL6 223 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 P01737 135 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 IGHG2P01859 326 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 AMBPP02760 352 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 COX6B1P14854 86 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 FABP4P15090 132 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 CRISP2P16562 243 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 CBLN1P23435 193 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 IER3P46695 156 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 CSN1S1P47710 185 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 PCP4P48539 62 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 GNG5P63218 68 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 PAFAH1B2P68402 229 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 RHOGP84095 191 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 RELQ04864 619 aaPredicted RBP3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 PSG3Q16557 428 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 C15orf32Q32M92 178 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 PYY3Q5JQD4 70 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 OR10J3Q5JRS4 329 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 SAPCD1Q5SSQ6 148 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 C1orf194Q5T5A4 169 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 LEMD1Q68G75 181 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 C16orf54Q6UWD8 224 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 TOMM20LQ6UXN7 152 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 Q86TA4 180 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 EXOC3-AS1Q8N2X6 119 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 ZNF843Q8N446 348 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 GBGT1Q8N5D6 347 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 NUP35Q8NFH5 326 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 OR5R1Q8NH85 324 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 RPP21Q9H633 154 aaKnown RBP3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 NIT2Q9NQR4 276 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 ZNF331Q9NQX6 463 aaPredicted RBP3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 CLEC5AQ9NY25 188 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 PSG8Q9UQ74 426 aa3.34□□□□□ -1.87
UBE2D3-230ENST00000510599 SPTA1P02549 2419 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 IGHV4OR15-8A0A075B7B6 117 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 TRAV40A0A0B4J280 105 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 A0A1B0GW15 77 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 A0A1B0GXF2 115 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 RBAKDNA6NC62 111 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 A8MWP6 167 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 G3V318 75 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 CLEC3BP05452 202 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 ATP5G2Q06055 141 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 LOXL1Q08397 574 aaPredicted RBP3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 ECSCRQ19T08 205 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 PDZD11Q5EBL8 140 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 FAM209BQ5JX69 171 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 Q6AWC8 147 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 CYB5R2Q6BCY4 276 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 LINC00322Q6ZN03 302 aaPredicted RBP3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 RBPMS2Q6ZRY4 209 aaKnown RBP3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 GOLT1AQ6ZVE7 132 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 PRNTQ86SH4 94 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 LRRC75A-AS1Q8N1F1 130 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 CIARTQ8N365 385 aaPredicted RBP3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 GATD1Q8NB37 220 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 NHLRC2Q8NBF2 726 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 USMG5Q96IX5 58 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 C17orf77Q96MU5 243 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 SLC50A1Q9BRV3 221 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 GSN-AS1Q9NRJ2 163 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 BEX4Q9NWD9 120 aaPredicted RBP3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 RPH3ALQ9UNE2 315 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 S4R3C0 116 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 PKD1L2Q7Z442 2459 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 NCOR2Q9Y618 2525 aa3.33□□□□□ -1.88
UBE2D3-230ENST00000510599 PRRC2AP48634 2157 aaKnown RBP3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.32□□□□□ -1.883e-7■■■□□ 15.7
UBE2D3-230ENST00000510599 TPRP12270 2363 aaKnown RBP3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 IGSF10Q6WRI0 2623 aa3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 A0A096LNT2 108 aa3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 A0A0G2JLM5 398 aa3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 TMEM89A2RUT3 159 aa3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 CLPSL1A2RUU4 121 aa3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 PCP4L1A6NKN8 68 aa3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 HIGD1CA8MV81 97 aa3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 H3BTX0 84 aa3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 H3BUX3 64 aa3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 NDUFA4O00483 81 aa3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 CA1P00915 261 aaPredicted RBP3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 IGHV3-23P01764 117 aa3.32□□□□□ -1.88
UBE2D3-230ENST00000510599 APCSP02743 223 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms