RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 TFPI2P48307 235 aa5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 CRIP1P50238 77 aa5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 UBE2G1P62253 170 aa5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 RPL11P62913 178 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 DEFB114Q30KQ6 69 aa5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 BAGE2Q86Y30 109 aa5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 TMEM183AQ8IXX5 376 aa5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 LINC00482Q8N8I6 264 aa5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 ZC2HC1AQ96GY0 325 aa5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 SFRP2Q96HF1 295 aa5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 C8orf49Q96NF6 230 aa5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 AGPAT4-IT1Q9H0P7 198 aa5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 RNASE7Q9H1E1 156 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 SIGLEC8Q9NYZ4 499 aa5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 PRELID1Q9Y255 219 aa5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 V9GYV3 84 aa5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 FBN1P35555 2871 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 SORL1Q92673 2214 aa5.16□□□□□ -1.58
TOPBP1-203ENST00000503464 CMYA5Q8N3K9 4069 aa5.15□□□□□ -1.58
TOPBP1-203ENST00000503464 SERTM2A0A1B0GWG4 89 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 RBAKDNA6NC62 111 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 C19orf71A6NCJ1 209 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 COLCA2A8K830 154 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 NPIPB6E9PJ23 425 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 CXCL1P09341 107 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 ZNF688P0C7X2 276 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 MGST1P10620 155 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 BMI1P35226 326 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 CSN1S1P47710 185 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 ZNF80P51504 273 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 CD300EQ496F6 205 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 PRR9Q5T870 116 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 GDF5OSQ5U4N7 250 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 C9orf47Q6ZRZ4 202 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 COX8CQ7Z4L0 72 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 WFDC3Q8IUB2 231 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 ZNF738Q8NE65 137 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 SMIM12Q96EX1 92 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 FAM19A4Q96LR4 140 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 PRR25Q96S07 402 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 KRTAP4-12Q9BQ66 201 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 TUBA4BQ9H853 241 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 SMCO4Q9NRQ5 59 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 TMEM242Q9NWH2 141 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 ZNF256Q9Y2P7 627 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 VWFP04275 2813 aa5.15□□□□□ -1.59
TOPBP1-203ENST00000503464 TRAV2A0A0B4J234 112 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 M0QZ24 198 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 CA1P00915 261 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 MT-ND4LP03901 98 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 PFN1P07737 140 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 CT45A10P0DMU9 189 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 ELOBQ15370 118 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 ZNF124Q15973 351 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 PSMG4Q5JS54 123 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 PRR27Q6MZM9 219 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 Q6ZQT7 251 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 FAM231DQ6ZW35 169 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 ZNF575Q86XF7 245 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 NUDT10Q8NFP7 164 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 OR8A1Q8NGG7 326 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 OR10G8Q8NGN5 311 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 DYNLRB2Q8TF09 96 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 ANAPC16Q96DE5 110 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 NUDT11Q96G61 164 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 CTDSP1Q9GZU7 261 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 OSTCQ9NRP0 149 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 PPP1R14DQ9NXH3 145 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 CLEC5AQ9NY25 188 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 ZNF492Q9P255 531 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 ZFP30Q9Y2G7 519 aa5.14□□□□□ -1.59
TOPBP1-203ENST00000503464 TGIF2-C20orf24A0A0A6YYL0 155 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 A0A0J9YX75 114 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 CXorf65A6NEN9 183 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 FBLL1A6NHQ2 334 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 H7BYZ3 331 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 K7EQM0 130 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 IGLV1-51P01701 117 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 ZNF138P52744 262 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 ERVFC1-1P60608 527 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 KIR3DS1Q14943 382 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 ODF3L2Q3SX64 289 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 LINC01559Q495D7 138 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 IBA57Q5T440 356 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 SAMD13Q5VXD3 122 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 ZFAND2AQ8N6M9 145 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 PYGO2Q9BRQ0 406 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 URGCP-MRPS24S4R325 110 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 TRRAPQ9Y4A5 3859 aa5.13□□□□□ -1.59
TOPBP1-203ENST00000503464 TRAV25A0A0B4J276 109 aa5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 RBMY1BA6NDE4 496 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 RBMY1EA6NEQ0 496 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 A8MTW9 85 aa5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 PPP1R2P9O14990 202 aa5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 SH2D1AO60880 128 aa5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 SAP30O75446 220 aa5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 PF4P02776 101 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms