RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 SPINK13Q1W4C9 94 aa9.86□□□□□ -0.83
PTPN7-218ENST00000496197 TVP23CQ96ET8 276 aa9.86□□□□□ -0.83
PTPN7-218ENST00000496197 CLUHP3Q96NS8 147 aa9.86□□□□□ -0.83
PTPN7-218ENST00000496197 ATG101Q9BSB4 218 aa9.86□□□□□ -0.83
PTPN7-218ENST00000496197 TRAV12-2A0A075B6T6 113 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 RBAKDNA6NC62 111 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 RBFOX3A6NFN3 312 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 CRXO43186 299 aaPredicted RBP9.85□□□□□ -0.83
PTPN7-218ENST00000496197 CA1P00915 261 aaPredicted RBP9.85□□□□□ -0.83
PTPN7-218ENST00000496197 SRSF3P84103 164 aaKnown RBP9.85□□□□□ -0.83
PTPN7-218ENST00000496197 MEF2BQ02080 365 aaPredicted RBP9.85□□□□□ -0.83
PTPN7-218ENST00000496197 TOR2AQ5JU69 321 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 PRR9Q5T870 116 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 ARL6IP6Q8N6S5 226 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 CYB561D1Q8N8Q1 229 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 FAM210AQ96ND0 272 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 NKX6-2Q9C056 277 aaPredicted RBP9.85□□□□□ -0.83
PTPN7-218ENST00000496197 CSTL1Q9H114 145 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 RETNQ9HD89 108 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 ZNF492Q9P255 531 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 J3KRW8 73 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 RGS13O14921 159 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 RBMY1A1P0DJD3 496 aaKnown RBP9.85□□□□□ -0.83
PTPN7-218ENST00000496197 RBMY1CP0DJD4 496 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 RBMY1FQ15415 496 aaKnown RBP9.85□□□□□ -0.83
PTPN7-218ENST00000496197 ZNF506Q5JVG8 444 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 CLLU1Q5K131 121 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 Q6ZQT7 251 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 CSNK1G2-AS1Q8NCQ2 148 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 C2CD4CQ8TF44 421 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 DERL1Q9BUN8 251 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 XCL2Q9UBD3 114 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 VAX2Q9UIW0 290 aa9.85□□□□□ -0.83
PTPN7-218ENST00000496197 KIR2DL5BA0A0G2JN68 375 aa9.84□□□□□ -0.83
PTPN7-218ENST00000496197 KIR2DL5BA0A0G2JPC4 375 aa9.84□□□□□ -0.83
PTPN7-218ENST00000496197 IFNA1P01562 189 aa9.84□□□□□ -0.83
PTPN7-218ENST00000496197 ZNF138P52744 262 aa9.84□□□□□ -0.83
PTPN7-218ENST00000496197 DEFB135Q30KP9 77 aa9.84□□□□□ -0.83
PTPN7-218ENST00000496197 TMEM78Q5T7P6 136 aa9.84□□□□□ -0.83
PTPN7-218ENST00000496197 KIR2DL5AQ8N109 375 aa9.84□□□□□ -0.83
PTPN7-218ENST00000496197 ZFAND2AQ8N6M9 145 aa9.84□□□□□ -0.83
PTPN7-218ENST00000496197 TMEM75Q8N9X5 138 aa9.84□□□□□ -0.83
PTPN7-218ENST00000496197 KIR2DL5BQ8NHK3 375 aa9.84□□□□□ -0.83
PTPN7-218ENST00000496197 HIST1H2BAQ96A08 127 aa9.84□□□□□ -0.83
PTPN7-218ENST00000496197 LINC00477Q96M19 166 aa9.84□□□□□ -0.83
PTPN7-218ENST00000496197 C9JQL5 133 aa9.83□□□□□ -0.84
PTPN7-218ENST00000496197 APOC4P55056 127 aa9.83□□□□□ -0.84
PTPN7-218ENST00000496197 MORN3Q6PF18 240 aaPredicted RBP9.83□□□□□ -0.84
PTPN7-218ENST00000496197 C11orf52Q96A22 123 aa9.83□□□□□ -0.84
PTPN7-218ENST00000496197 C8orf49Q96NF6 230 aa9.83□□□□□ -0.84
PTPN7-218ENST00000496197 B9D2Q9BPU9 175 aa9.83□□□□□ -0.84
PTPN7-218ENST00000496197 PSG8Q9UQ74 426 aa9.83□□□□□ -0.84
PTPN7-218ENST00000496197 SERTM2A0A1B0GWG4 89 aa9.82□□□□□ -0.84
PTPN7-218ENST00000496197 CDKN1BP46527 198 aa9.82□□□□□ -0.84
PTPN7-218ENST00000496197 FLI1Q01543 452 aaPredicted RBP9.82□□□□□ -0.84
PTPN7-218ENST00000496197 GFI1BQ5VTD9 330 aa9.82□□□□□ -0.84
PTPN7-218ENST00000496197 PRNTQ86SH4 94 aa9.82□□□□□ -0.84
PTPN7-218ENST00000496197 Q86TA4 180 aa9.82□□□□□ -0.84
PTPN7-218ENST00000496197 ODF3Q96PU9 254 aa9.82□□□□□ -0.84
PTPN7-218ENST00000496197 PPP1R14DQ9NXH3 145 aa9.82□□□□□ -0.84
PTPN7-218ENST00000496197 KLF12Q9Y4X4 402 aa9.82□□□□□ -0.84
PTPN7-218ENST00000496197 COL7A1Q02388 2944 aa9.81□□□□□ -0.84
PTPN7-218ENST00000496197 KLLNB2CW77 178 aa9.81□□□□□ -0.84
PTPN7-218ENST00000496197 F6UZH7 168 aa9.81□□□□□ -0.84
PTPN7-218ENST00000496197 CRISP2P16562 243 aa9.81□□□□□ -0.84
PTPN7-218ENST00000496197 AKR1C3P42330 323 aa9.81□□□□□ -0.84
PTPN7-218ENST00000496197 RAB14P61106 215 aa9.81□□□□□ -0.84
PTPN7-218ENST00000496197 BTN1A1Q13410 526 aa9.81□□□□□ -0.84
PTPN7-218ENST00000496197 C1orf158Q8N1D5 194 aa9.81□□□□□ -0.84
PTPN7-218ENST00000496197 TXNDC17Q9BRA2 123 aa9.81□□□□□ -0.84
PTPN7-218ENST00000496197 TM2D3Q9BRN9 247 aa9.81□□□□□ -0.84
PTPN7-218ENST00000496197 TCEAL7Q9BRU2 100 aa9.81□□□□□ -0.84
PTPN7-218ENST00000496197 EIF5A2Q9GZV4 153 aaKnown RBP9.81□□□□□ -0.84
PTPN7-218ENST00000496197 DNAH9Q9NYC9 4486 aa9.8□□□□□ -0.84
PTPN7-218ENST00000496197 PRM2P04554 102 aa9.8□□□□□ -0.84
PTPN7-218ENST00000496197 NUTF2P61970 127 aaKnown RBP9.8□□□□□ -0.84
PTPN7-218ENST00000496197 TMEM183BQ1AE95 376 aa9.8□□□□□ -0.84
PTPN7-218ENST00000496197 OVOL2Q9BRP0 275 aa9.8□□□□□ -0.84
PTPN7-218ENST00000496197 TRBV20OR9-2A0A075B6H5 130 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 K7EQM0 130 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 PDE6DO43924 150 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 SRP19P09132 144 aaKnown RBP9.79□□□□□ -0.84
PTPN7-218ENST00000496197 TAGLN2P37802 199 aaKnown RBP9.79□□□□□ -0.84
PTPN7-218ENST00000496197 LEPP41159 167 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 RPL35P42766 123 aaKnown RBP9.79□□□□□ -0.84
PTPN7-218ENST00000496197 ZNF80P51504 273 aaPredicted RBP9.79□□□□□ -0.84
PTPN7-218ENST00000496197 Q6ZWC4 215 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 NHLRC2Q8NBF2 726 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 FMC1Q96HJ9 113 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 IGF2BP2-AS1Q96M15 143 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 TENM3Q9P273 2699 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 HUWE1Q7Z6Z7 4374 aaKnown RBP9.79□□□□□ -0.84
PTPN7-218ENST00000496197 TRAV12-3A0A0B4J271 114 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 RAB19A4D1S5 217 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 UBE2CO00762 179 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 LTAP01374 205 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 UBE2G1P62253 170 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 RNF183Q96D59 192 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 TREM1Q9NP99 234 aa9.79□□□□□ -0.84
PTPN7-218ENST00000496197 MED9Q9NWA0 146 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms