RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 TMEM189A5PLL7 270 aa5.35□□□□□ -1.55
USP39-219ENST00000496047 PCP4L1A6NKN8 68 aa5.35□□□□□ -1.55
USP39-219ENST00000496047 NPIPB6E9PJ23 425 aa5.35□□□□□ -1.55
USP39-219ENST00000496047 TSTD3H0UI37 97 aa5.35□□□□□ -1.55
USP39-219ENST00000496047 SPINK4O60575 86 aa5.35□□□□□ -1.55
USP39-219ENST00000496047 RAB4AP20338 218 aa5.35□□□□□ -1.55
USP39-219ENST00000496047 PPIFP30405 207 aaKnown RBP5.35□□□□□ -1.55
USP39-219ENST00000496047 Q0VG73 95 aa5.35□□□□□ -1.55
USP39-219ENST00000496047 C21orf62-AS1Q17RA5 79 aa5.35□□□□□ -1.55
USP39-219ENST00000496047 IQCJQ1A5X6 159 aa5.35□□□□□ -1.55
USP39-219ENST00000496047 NUP35Q8NFH5 326 aa5.35□□□□□ -1.55
USP39-219ENST00000496047 OR4X2Q8NGF9 303 aa5.35□□□□□ -1.55
USP39-219ENST00000496047 C16orf92Q96LL3 132 aa5.35□□□□□ -1.55
USP39-219ENST00000496047 HIST1H2BLQ99880 126 aa5.35□□□□□ -1.55
USP39-219ENST00000496047 UFC1Q9Y3C8 167 aa5.35□□□□□ -1.55
USP39-219ENST00000496047 A0A096LNT2 108 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 TRAV8-1A0A0A6YYK1 113 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 A0A1B0GUT8 65 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 M0QZ24 198 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 M0R3E3 92 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 CA1P00915 261 aaPredicted RBP5.34□□□□□ -1.55
USP39-219ENST00000496047 IGHV4-59P01825 116 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 SRIP30626 198 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 ID1P41134 155 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 CAMPP49913 170 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 SRSF2Q01130 221 aaKnown RBP5.34□□□□□ -1.55
USP39-219ENST00000496047 C16orf54Q6UWD8 224 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 SIGLECL1Q8N7X8 197 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 OR10J6PQ8NGY7 276 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 ZC2HC1AQ96GY0 325 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 KCNS1Q96KK3 526 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 PGLYRP4Q96LB8 373 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 C17orf77Q96MU5 243 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 NOL4LQ96MY1 436 aaPredicted RBP5.34□□□□□ -1.55
USP39-219ENST00000496047 ASCL2Q99929 193 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 DAZ1Q9NQZ3 744 aaKnown RBP5.34□□□□□ -1.55
USP39-219ENST00000496047 PEF1Q9UBV8 284 aaKnown RBP5.34□□□□□ -1.55
USP39-219ENST00000496047 LINC00527Q9UJ94 153 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 LENEPQ9Y5L5 61 aa5.34□□□□□ -1.55
USP39-219ENST00000496047 NIPBLQ6KC79 2804 aaeCLIP5.34□□□□□ -1.555e-6■■■■■ 32.2
USP39-219ENST00000496047 FN1P02751 2386 aaKnown RBP5.34□□□□□ -1.56
USP39-219ENST00000496047 IGKV2-40A0A087WW87 121 aaPredicted RBP5.33□□□□□ -1.56
USP39-219ENST00000496047 GRIFINA4D1Z8 144 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 LINC01548A6NM66 108 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 FABP5P3A8MUU1 101 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 OVOL1O14753 267 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 IGKV2D-40P01614 121 aaPredicted RBP5.33□□□□□ -1.56
USP39-219ENST00000496047 IGLV2-11P01706 119 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 IGHG4P01861 327 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 AMBPP02760 352 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 ELANEP08246 267 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 ESDP10768 282 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 HIST1H1AQ02539 215 aaPredicted RBP5.33□□□□□ -1.56
USP39-219ENST00000496047 GFI1BQ5VTD9 330 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 LCN12Q6JVE5 192 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 Q6YL49 198 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 TCF24Q7RTU0 167 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 SMIM15Q7Z3B0 74 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 COX8CQ7Z4L0 72 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 TMEM86BQ8N661 226 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 ZNF738Q8NE65 137 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 CLUHP3Q96NS8 147 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 PRR25Q96S07 402 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 JMJD8Q96S16 334 aa5.33□□□□□ -1.56
USP39-219ENST00000496047 IGHV3OR16-8A0A075B7F1 116 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 IGHV7-4-1A0A0J9YVY3 117 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 A0A1B0GXF2 115 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 K7EMT4 169 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 ZNF207O43670 478 aaKnown RBP5.32□□□□□ -1.56
USP39-219ENST00000496047 SH2D1AO60880 128 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 HSBP1O75506 76 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 FSHBP01225 129 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 IGHV3-11P01762 117 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 AMTP48728 403 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 ZNF138P52744 262 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 FOXA3P55318 350 aaPredicted RBP5.32□□□□□ -1.56
USP39-219ENST00000496047 FOXE3Q13461 319 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 JOSD1Q15040 202 aaPredicted RBP5.32□□□□□ -1.56
USP39-219ENST00000496047 GLMPQ8WWB7 406 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 C8orf49Q96NF6 230 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 TPPP3Q9BW30 176 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 NRN1Q9NPD7 142 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 CELSR1Q9NYQ6 3014 aa5.32□□□□□ -1.56
USP39-219ENST00000496047 IGHV3-66A0A0C4DH42 116 aa5.31□□□□□ -1.56
USP39-219ENST00000496047 CLPSL1A2RUU4 121 aa5.31□□□□□ -1.56
USP39-219ENST00000496047 A8MWP6 167 aa5.31□□□□□ -1.56
USP39-219ENST00000496047 F2Z2F3 143 aa5.31□□□□□ -1.56
USP39-219ENST00000496047 SERF1AO75920 110 aa5.31□□□□□ -1.56
USP39-219ENST00000496047 SCGB1D1O95968 90 aa5.31□□□□□ -1.56
USP39-219ENST00000496047 ORM1P02763 201 aa5.31□□□□□ -1.56
USP39-219ENST00000496047 LGALS1P09382 135 aaKnown RBP5.31□□□□□ -1.56
USP39-219ENST00000496047 PMCHP20382 165 aa5.31□□□□□ -1.56
USP39-219ENST00000496047 PSMB8P28062 276 aa5.31□□□□□ -1.56
USP39-219ENST00000496047 BLCAPP62952 87 aa5.31□□□□□ -1.56
USP39-219ENST00000496047 CFHR3Q02985 330 aa5.31□□□□□ -1.56
USP39-219ENST00000496047 KLF5Q13887 457 aaPredicted RBP5.31□□□□□ -1.56
USP39-219ENST00000496047 PYY3Q5JQD4 70 aa5.31□□□□□ -1.56
USP39-219ENST00000496047 GPHB5Q86YW7 130 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms