RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 TRAV5A0A0B4J249 113 aa9.67□□□□□ -0.86
VARS-228ENST00000495010 OR4E1P0C645 316 aa9.67□□□□□ -0.86
VARS-228ENST00000495010 SRIP30626 198 aa9.67□□□□□ -0.86
VARS-228ENST00000495010 CAMLGP49069 296 aa9.67□□□□□ -0.86
VARS-228ENST00000495010 CD300CQ08708 224 aa9.67□□□□□ -0.86
VARS-228ENST00000495010 IAH1Q2TAA2 248 aaPredicted RBP9.67□□□□□ -0.86
VARS-228ENST00000495010 IBA57Q5T440 356 aaKnown RBP9.67□□□□□ -0.86
VARS-228ENST00000495010 C12orf45Q8N5I9 185 aaPredicted RBP9.67□□□□□ -0.86
VARS-228ENST00000495010 PCNPQ8WW12 178 aaKnown RBP9.67□□□□□ -0.86
VARS-228ENST00000495010 MRPL53Q96EL3 112 aaKnown RBP9.67□□□□□ -0.86
VARS-228ENST00000495010 GSKIPQ9P0R6 139 aa9.67□□□□□ -0.86
VARS-228ENST00000495010 IGLV5-52A0A0A0MRZ9 124 aa9.66□□□□□ -0.86
VARS-228ENST00000495010 TRGV4A0A0C4DH28 118 aa9.66□□□□□ -0.86
VARS-228ENST00000495010 KLLNB2CW77 178 aa9.66□□□□□ -0.86
VARS-228ENST00000495010 E5RGE8 158 aa9.66□□□□□ -0.86
VARS-228ENST00000495010 L7N2F9 121 aa9.66□□□□□ -0.86
VARS-228ENST00000495010 PSCAO43653 123 aa9.66□□□□□ -0.86
VARS-228ENST00000495010 ZNF253O75346 499 aa9.66□□□□□ -0.86
VARS-228ENST00000495010 VAMP2P63027 116 aa9.66□□□□□ -0.86
VARS-228ENST00000495010 HAMPP81172 84 aa9.66□□□□□ -0.86
VARS-228ENST00000495010 ARL16Q0P5N6 197 aa9.66□□□□□ -0.86
VARS-228ENST00000495010 PFDN5Q99471 154 aa9.66□□□□□ -0.86
VARS-228ENST00000495010 VGLL1Q99990 258 aa9.66□□□□□ -0.86
VARS-228ENST00000495010 TIMM9Q9Y5J7 89 aa9.66□□□□□ -0.86
VARS-228ENST00000495010 M0R3E3 92 aa9.65□□□□□ -0.86
VARS-228ENST00000495010 INPP1P49441 399 aa9.65□□□□□ -0.86
VARS-228ENST00000495010 NRARPQ7Z6K4 114 aa9.65□□□□□ -0.86
VARS-228ENST00000495010 WFDC10BQ8IUB3 73 aa9.65□□□□□ -0.86
VARS-228ENST00000495010 C10orf126Q8N4M7 172 aa9.65□□□□□ -0.86
VARS-228ENST00000495010 MRPL32Q9BYC8 188 aaKnown RBP9.65□□□□□ -0.86
VARS-228ENST00000495010 AGPAT4-IT1Q9H0P7 198 aa9.65□□□□□ -0.86
VARS-228ENST00000495010 PRELID1Q9Y255 219 aa9.65□□□□□ -0.86
VARS-228ENST00000495010 FLG2Q5D862 2391 aaPredicted RBP9.64□□□□□ -0.87
VARS-228ENST00000495010 TRBV19A0A075B6N1 114 aa9.64□□□□□ -0.87
VARS-228ENST00000495010 IGHV1OR15-1A0A075B7D0 117 aa9.64□□□□□ -0.87
VARS-228ENST00000495010 CRYGDP07320 174 aa9.64□□□□□ -0.87
VARS-228ENST00000495010 HIST1H1EP10412 219 aaKnown RBP9.64□□□□□ -0.87
VARS-228ENST00000495010 S100A5P33763 92 aa9.64□□□□□ -0.87
VARS-228ENST00000495010 BCAP31P51572 246 aa9.64□□□□□ -0.87
VARS-228ENST00000495010 ZNF415Q09FC8 603 aa9.64□□□□□ -0.87
VARS-228ENST00000495010 FHL2Q14192 279 aa9.64□□□□□ -0.87
VARS-228ENST00000495010 TMEM78Q5T7P6 136 aa9.64□□□□□ -0.87
VARS-228ENST00000495010 MIC13Q5XKP0 118 aa9.64□□□□□ -0.87
VARS-228ENST00000495010 TMEM70Q9BUB7 260 aa9.64□□□□□ -0.87
VARS-228ENST00000495010 AAMDCQ9H7C9 122 aa9.64□□□□□ -0.87
VARS-228ENST00000495010 TP53TG3Q9ULZ0 132 aa9.64□□□□□ -0.87
VARS-228ENST00000495010 C7orf66A4D0T2 115 aa9.63□□□□□ -0.87
VARS-228ENST00000495010 K7EQD1 137 aa9.63□□□□□ -0.87
VARS-228ENST00000495010 NMBP08949 121 aa9.63□□□□□ -0.87
VARS-228ENST00000495010 NTN5Q8WTR8 489 aaPredicted RBP9.63□□□□□ -0.87
VARS-228ENST00000495010 FAM19A4Q96LR4 140 aa9.63□□□□□ -0.87
VARS-228ENST00000495010 SRRQ9GZT4 340 aa9.63□□□□□ -0.87
VARS-228ENST00000495010 C20orf85Q9H1P6 137 aa9.63□□□□□ -0.87
VARS-228ENST00000495010 RCL1Q9Y2P8 373 aaKnown RBP9.63□□□□□ -0.87
VARS-228ENST00000495010 V9GYH0 126 aa9.63□□□□□ -0.87
VARS-228ENST00000495010 FAT1Q14517 4588 aa9.63□□□□□ -0.87
VARS-228ENST00000495010 NAP1L6A6NFF2 107 aa9.62□□□□□ -0.87
VARS-228ENST00000495010 H3BMQ9 156 aa9.62□□□□□ -0.87
VARS-228ENST00000495010 NDUFB6O95139 128 aa9.62□□□□□ -0.87
VARS-228ENST00000495010 ORM1P02763 201 aa9.62□□□□□ -0.87
VARS-228ENST00000495010 GYPEP15421 78 aa9.62□□□□□ -0.87
VARS-228ENST00000495010 CRISP2P16562 243 aa9.62□□□□□ -0.87
VARS-228ENST00000495010 BLNKQ8WV28 456 aa9.62□□□□□ -0.87
VARS-228ENST00000495010 TXNDC17Q9BRA2 123 aa9.62□□□□□ -0.87
VARS-228ENST00000495010 SLC39A9Q9NUM3 307 aa9.62□□□□□ -0.87
VARS-228ENST00000495010 UQCC1Q9NVA1 299 aa9.62□□□□□ -0.87
VARS-228ENST00000495010 FLVCR2Q9UPI3 526 aa9.62□□□□□ -0.87
VARS-228ENST00000495010 MBPP02686 304 aaPredicted RBP9.61□□□□□ -0.87
VARS-228ENST00000495010 CAV2P51636 162 aa9.61□□□□□ -0.87
VARS-228ENST00000495010 BAXQ07812 192 aa9.61□□□□□ -0.87
VARS-228ENST00000495010 PDE6HQ13956 83 aa9.61□□□□□ -0.87
VARS-228ENST00000495010 ZNF846Q147U1 533 aa9.61□□□□□ -0.87
VARS-228ENST00000495010 C9orf47Q6ZRZ4 202 aa9.61□□□□□ -0.87
VARS-228ENST00000495010 EXOC3-AS1Q8N2X6 119 aa9.61□□□□□ -0.87
VARS-228ENST00000495010 TMEM14CQ9P0S9 112 aa9.61□□□□□ -0.87
VARS-228ENST00000495010 LSM5Q9Y4Y9 91 aaKnown RBP9.61□□□□□ -0.87
VARS-228ENST00000495010 IGKV2-40A0A087WW87 121 aaPredicted RBP9.6□□□□□ -0.87
VARS-228ENST00000495010 C9JCJ5 164 aa9.6□□□□□ -0.87
VARS-228ENST00000495010 CST7O76096 145 aa9.6□□□□□ -0.87
VARS-228ENST00000495010 NDUFB4O95168 129 aa9.6□□□□□ -0.87
VARS-228ENST00000495010 IGKV2D-40P01614 121 aaPredicted RBP9.6□□□□□ -0.87
VARS-228ENST00000495010 PLA2G1BP04054 148 aaKnown RBP9.6□□□□□ -0.87
VARS-228ENST00000495010 SFTA3P0C7M3 94 aa9.6□□□□□ -0.87
VARS-228ENST00000495010 RPL29P47914 159 aaKnown RBP9.6□□□□□ -0.87
VARS-228ENST00000495010 FAM122CQ6P4D5 195 aa9.6□□□□□ -0.87
VARS-228ENST00000495010 IQCF2Q8IXL9 164 aa9.6□□□□□ -0.87
VARS-228ENST00000495010 GPN1Q9HCN4 374 aaPredicted RBP9.6□□□□□ -0.87
VARS-228ENST00000495010 PYYP10082 97 aa9.59□□□□□ -0.87
VARS-228ENST00000495010 PRR9Q5T870 116 aa9.59□□□□□ -0.87
VARS-228ENST00000495010 TRIQKQ629K1 86 aa9.59□□□□□ -0.87
VARS-228ENST00000495010 ZFAND2AQ8N6M9 145 aa9.59□□□□□ -0.87
VARS-228ENST00000495010 ZNF479Q96JC4 524 aa9.59□□□□□ -0.87
VARS-228ENST00000495010 ZNF492Q9P255 531 aa9.59□□□□□ -0.87
VARS-228ENST00000495010 WDR83OSQ9Y284 106 aa9.59□□□□□ -0.87
VARS-228ENST00000495010 SRRM2Q9UQ35 2752 aaKnown RBP9.58□□□□□ -0.88
VARS-228ENST00000495010 UBE2L5PA0A1B0GUS4 154 aa9.58□□□□□ -0.88
VARS-228ENST00000495010 CENPXA8MT69 81 aa9.58□□□□□ -0.88
VARS-228ENST00000495010 FAM25EA8MYX2 175 aa9.58□□□□□ -0.88
VARS-228ENST00000495010 PVALBP20472 110 aaPredicted RBP9.58□□□□□ -0.88
VARS-228ENST00000495010 SPANXN2Q5MJ10 180 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms