RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 PPP1CCP36873 323 aaKnown RBP2.86□□□□□ -1.95
SMG7-208ENST00000493609 ATP5J2P56134 94 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 FLI1Q01543 452 aaPredicted RBP2.86□□□□□ -1.95
SMG7-208ENST00000493609 RPL18AQ02543 176 aaKnown RBP2.86□□□□□ -1.95
SMG7-208ENST00000493609 BAXQ07812 192 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 BAMBIQ13145 260 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 BTN1A1Q13410 526 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 OR2F1Q13607 317 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 HCP5Q6MZN7 132 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 TMED4Q7Z7H5 227 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 SELENOHQ8IZQ5 122 aaKnown RBP2.86□□□□□ -1.95
SMG7-208ENST00000493609 LHFPL5Q8TAF8 219 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 VSTM2AQ8TAG5 236 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 C2orf50Q96LR7 162 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 AQP10Q96PS8 301 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 CIB3Q96Q77 187 aaPredicted RBP2.86□□□□□ -1.95
SMG7-208ENST00000493609 NABP2Q9BQ15 211 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 SEC22CQ9BRL7 303 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 SHANK2-AS3Q9BTD1 123 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 PARD6GQ9BYG4 376 aaPredicted RBP2.86□□□□□ -1.95
SMG7-208ENST00000493609 ARV1Q9H2C2 271 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 TNFSF18Q9UNG2 199 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 INSIG2Q9Y5U4 225 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 PDZD2O15018 2839 aa2.86□□□□□ -1.95
SMG7-208ENST00000493609 SPG11Q96JI7 2443 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 UTP20O75691 2785 aaKnown RBP2.85□□□□□ -1.95
SMG7-208ENST00000493609 A0A0D9SG52 128 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 LINC00854A0A1B0GVQ3 168 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 A8MWL6 223 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 LEUTXA8MZ59 168 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 BUB1B-PAK6H3BSN5 160 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 FGF16O43320 207 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 DEDDO75618 318 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 BRI3O95415 125 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 HRASP01112 189 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 CCL3L1P16619 93 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 AKR1C4P17516 323 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 GALR1P47211 349 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 LGALS7P47929 136 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 FXYD4P59646 89 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 UBE2KP61086 200 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 RPL30P62888 115 aaKnown RBP2.85□□□□□ -1.95
SMG7-208ENST00000493609 SMCO1Q147U7 214 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 RTL8BQ17RB0 113 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 CLEC12BQ2HXU8 276 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 BSXQ3C1V8 233 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 BRD3OSQ6XYD6 125 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 Q8N6K4 173 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 DEFB108BQ8NET1 73 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 OR4C13Q8NGP0 309 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 OR2T35Q8NGX2 323 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 OR51H1Q8NH63 302 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 OR1S1Q8NH92 325 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 STOML3Q8TAV4 291 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 TMEM167AQ8TBQ9 72 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 PPP1R1CQ8WVI7 109 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 BAALCQ8WXS3 180 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 H1FXQ92522 213 aaKnown RBP2.85□□□□□ -1.95
SMG7-208ENST00000493609 MALSU1Q96EH3 234 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 TMEM14BQ9NUH8 114 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 FKBP11Q9NYL4 201 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 VAX2Q9UIW0 290 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 WASHC3Q9Y3C0 194 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 CSMD1Q96PZ7 3565 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 FASNP49327 2511 aaKnown RBP2.85□□□□□ -1.95
SMG7-208ENST00000493609 ITPR3Q14573 2671 aa2.85□□□□□ -1.95
SMG7-208ENST00000493609 TRAV14DV4A0A0A6YYC5 116 aa2.84□□□□□ -1.95
SMG7-208ENST00000493609 LYNX1G3V0Z9 82 aa2.84□□□□□ -1.95
SMG7-208ENST00000493609 RNASEK-C17orf49H0YIS7 233 aa2.84□□□□□ -1.95
SMG7-208ENST00000493609 NDUFS6O75380 124 aaKnown RBP2.84□□□□□ -1.95
SMG7-208ENST00000493609 S1PR2O95136 353 aa2.84□□□□□ -1.95
SMG7-208ENST00000493609 IGKV1-5P01602 117 aa2.84□□□□□ -1.95
SMG7-208ENST00000493609 LYNX1P0DP58 116 aa2.84□□□□□ -1.95
SMG7-208ENST00000493609 PSMB6P28072 239 aa2.84□□□□□ -1.95
SMG7-208ENST00000493609 AKR1C2P52895 323 aa2.84□□□□□ -1.95
SMG7-208ENST00000493609 TNFRSF9Q07011 255 aa2.84□□□□□ -1.95
SMG7-208ENST00000493609 IAH1Q2TAA2 248 aaPredicted RBP2.84□□□□□ -1.95
SMG7-208ENST00000493609 C9orf62Q8N4C0 152 aa2.84□□□□□ -1.95
SMG7-208ENST00000493609 KCNRGQ8N5I3 272 aa2.84□□□□□ -1.95
SMG7-208ENST00000493609 TMEM86BQ8N661 226 aa2.84□□□□□ -1.95
SMG7-208ENST00000493609 DRAXINQ8NBI3 349 aaPredicted RBP2.84□□□□□ -1.95
SMG7-208ENST00000493609 OR10X1Q8NGY0 326 aa2.84□□□□□ -1.95
SMG7-208ENST00000493609 TSNAXQ99598 290 aaKnown RBP2.84□□□□□ -1.95
SMG7-208ENST00000493609 GGACTQ9BVM4 153 aa2.84□□□□□ -1.95
SMG7-208ENST00000493609 LYRM2Q9NU23 88 aaPredicted RBP2.84□□□□□ -1.95
SMG7-208ENST00000493609 PRNDQ9UKY0 176 aa2.84□□□□□ -1.95
SMG7-208ENST00000493609 RBM7Q9Y580 266 aaKnown RBP2.84□□□□□ -1.95
SMG7-208ENST00000493609 ITPR2Q14571 2701 aa2.84□□□□□ -1.96
SMG7-208ENST00000493609 IGHV6-1A0A0B4J1U7 121 aa2.83□□□□□ -1.96
SMG7-208ENST00000493609 IGHV3-43A0A0B4J1X8 118 aa2.83□□□□□ -1.96
SMG7-208ENST00000493609 BOLA2-SMG1P6H3BVE0 249 aa2.83□□□□□ -1.96
SMG7-208ENST00000493609 CLDN34H7C241 214 aa2.83□□□□□ -1.96
SMG7-208ENST00000493609 K7EPK0 472 aa2.83□□□□□ -1.96
SMG7-208ENST00000493609 M0QZK8 103 aa2.83□□□□□ -1.96
SMG7-208ENST00000493609 CORTO00230 105 aa2.83□□□□□ -1.96
SMG7-208ENST00000493609 SYNGR2O43760 224 aa2.83□□□□□ -1.96
SMG7-208ENST00000493609 ADAP1O75689 374 aa2.83□□□□□ -1.96
SMG7-208ENST00000493609 LY6HO94772 140 aa2.83□□□□□ -1.96
SMG7-208ENST00000493609 IGHV1-69P01742 117 aa2.83□□□□□ -1.96
SMG7-208ENST00000493609 HLA-DRB1P01911 266 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms