RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 RPEQ96AT9 228 aa9.15□□□□□ -0.95
HDAC4-210ENST00000493582 ANAPC13Q9BS18 74 aa9.15□□□□□ -0.95
HDAC4-210ENST00000493582 CTSZQ9UBR2 303 aa9.15□□□□□ -0.95
HDAC4-210ENST00000493582 DKK4Q9UBT3 224 aa9.15□□□□□ -0.95
HDAC4-210ENST00000493582 SLC25A15Q9Y619 301 aa9.15□□□□□ -0.95
HDAC4-210ENST00000493582 MAP1BP46821 2468 aaKnown RBP9.15□□□□□ -0.95
HDAC4-210ENST00000493582 TNRC18O15417 2968 aaPredicted RBP9.14□□□□□ -0.95
HDAC4-210ENST00000493582 K7EM74 188 aa9.14□□□□□ -0.95
HDAC4-210ENST00000493582 ORM1P02763 201 aa9.14□□□□□ -0.95
HDAC4-210ENST00000493582 IGFL4Q6B9Z1 124 aa9.14□□□□□ -0.95
HDAC4-210ENST00000493582 CARD19Q96LW7 228 aa9.14□□□□□ -0.95
HDAC4-210ENST00000493582 NXT2Q9NPJ8 142 aaKnown RBP9.14□□□□□ -0.95
HDAC4-210ENST00000493582 ZGRF1Q86YA3 2104 aa9.14□□□□□ -0.95
HDAC4-210ENST00000493582 NCBP2LA6PVI3 153 aaKnown RBP9.14□□□□□ -0.95
HDAC4-210ENST00000493582 B5MCH6 92 aa9.14□□□□□ -0.95
HDAC4-210ENST00000493582 IL4P05112 153 aa9.14□□□□□ -0.95
HDAC4-210ENST00000493582 ANXA2RQ3ZCQ2 193 aa9.14□□□□□ -0.95
HDAC4-210ENST00000493582 A0A1W2PNU3 283 aaPredicted RBP9.14□□□□□ -0.95
HDAC4-210ENST00000493582 LINC01549A6NIU2 74 aa9.14□□□□□ -0.95
HDAC4-210ENST00000493582 GATA4P43694 442 aa9.14□□□□□ -0.95
HDAC4-210ENST00000493582 EFNA4P52798 201 aa9.14□□□□□ -0.95
HDAC4-210ENST00000493582 TMEM30BQ3MIR4 351 aa9.14□□□□□ -0.95
HDAC4-210ENST00000493582 AAMDCQ9H7C9 122 aa9.14□□□□□ -0.95
HDAC4-210ENST00000493582 FAM90A27PA6NNH2 459 aa9.13□□□□□ -0.95
HDAC4-210ENST00000493582 H3BRN7 92 aa9.13□□□□□ -0.95
HDAC4-210ENST00000493582 IGLC6P0CF74 106 aa9.13□□□□□ -0.95
HDAC4-210ENST00000493582 GLRXP35754 106 aa9.13□□□□□ -0.95
HDAC4-210ENST00000493582 LYPD1Q8N2G4 141 aa9.13□□□□□ -0.95
HDAC4-210ENST00000493582 MYOZ3Q8TDC0 251 aa9.13□□□□□ -0.95
HDAC4-210ENST00000493582 DLX4Q92988 240 aaPredicted RBP9.13□□□□□ -0.95
HDAC4-210ENST00000493582 PRR25Q96S07 402 aa9.13□□□□□ -0.95
HDAC4-210ENST00000493582 RALYQ9UKM9 306 aaKnown RBP9.13□□□□□ -0.95
HDAC4-210ENST00000493582 UFC1Q9Y3C8 167 aa9.13□□□□□ -0.95
HDAC4-210ENST00000493582 PKDREJQ9NTG1 2253 aa9.13□□□□□ -0.95
HDAC4-210ENST00000493582 I3L2K1 104 aa9.13□□□□□ -0.95
HDAC4-210ENST00000493582 MRPS12O15235 138 aaKnown RBP9.13□□□□□ -0.95
HDAC4-210ENST00000493582 CCL11P51671 97 aa9.13□□□□□ -0.95
HDAC4-210ENST00000493582 ZNF491Q8N8L2 437 aa9.13□□□□□ -0.95
HDAC4-210ENST00000493582 SIT1Q9Y3P8 196 aa9.13□□□□□ -0.95
HDAC4-210ENST00000493582 CACNA1GO43497 2377 aa9.13□□□□□ -0.95
HDAC4-210ENST00000493582 LINC01546A6NGU7 62 aa9.12□□□□□ -0.95
HDAC4-210ENST00000493582 MALRD1Q5VYJ5 2156 aa9.12□□□□□ -0.95
HDAC4-210ENST00000493582 TEX22C9J3V5 150 aa9.12□□□□□ -0.95
HDAC4-210ENST00000493582 HLA-DRB4P13762 266 aa9.12□□□□□ -0.95
HDAC4-210ENST00000493582 DTX2Q86UW9 622 aa9.12□□□□□ -0.95
HDAC4-210ENST00000493582 ATP6V0E2Q8NHE4 81 aa9.12□□□□□ -0.95
HDAC4-210ENST00000493582 RNF125Q96EQ8 232 aa9.12□□□□□ -0.95
HDAC4-210ENST00000493582 KIR2DL4Q99706 377 aa9.12□□□□□ -0.95
HDAC4-210ENST00000493582 SIGLEC9Q9Y336 463 aa9.12□□□□□ -0.95
HDAC4-210ENST00000493582 HLA-DRB4X5D2U9 266 aa9.12□□□□□ -0.95
HDAC4-210ENST00000493582 TRAV26-2A0A0B4J265 109 aa9.12□□□□□ -0.95
HDAC4-210ENST00000493582 TGFAP01135 160 aa9.12□□□□□ -0.95
HDAC4-210ENST00000493582 THBDP07204 575 aa9.12□□□□□ -0.95
HDAC4-210ENST00000493582 GPR179Q6PRD1 2367 aa9.11□□□□□ -0.95
HDAC4-210ENST00000493582 IGLV3-9A0A075B6K5 115 aa9.11□□□□□ -0.95
HDAC4-210ENST00000493582 A0A087WX48 190 aa9.11□□□□□ -0.95
HDAC4-210ENST00000493582 MYMXA0A1B0GTQ4 84 aa9.11□□□□□ -0.95
HDAC4-210ENST00000493582 GAGE5Q13069 117 aa9.11□□□□□ -0.95
HDAC4-210ENST00000493582 GAGE6Q13070 117 aa9.11□□□□□ -0.95
HDAC4-210ENST00000493582 FBXL15Q9H469 300 aa9.11□□□□□ -0.95
HDAC4-210ENST00000493582 ZDBF2Q9HCK1 2354 aa9.11□□□□□ -0.95
HDAC4-210ENST00000493582 IGLV2-18A0A075B6J9 118 aa9.11□□□□□ -0.95
HDAC4-210ENST00000493582 WT1P19544 449 aaPredicted RBP9.11□□□□□ -0.95
HDAC4-210ENST00000493582 Q8N8P6 123 aa9.11□□□□□ -0.95
HDAC4-210ENST00000493582 HLA-DMBP28068 263 aa9.1□□□□□ -0.95
HDAC4-210ENST00000493582 LPAL2Q16609 132 aa9.1□□□□□ -0.95
HDAC4-210ENST00000493582 PPP1R27Q86WC6 154 aa9.1□□□□□ -0.95
HDAC4-210ENST00000493582 KLK15Q9H2R5 256 aa9.1□□□□□ -0.95
HDAC4-210ENST00000493582 COL27A1Q8IZC6 1860 aaPredicted RBP9.1□□□□□ -0.95
HDAC4-210ENST00000493582 WNK2Q9Y3S1 2297 aa9.1□□□□□ -0.95
HDAC4-210ENST00000493582 CEACAM4O75871 244 aa9.1□□□□□ -0.95
HDAC4-210ENST00000493582 SHISA2Q6UWI4 295 aa9.1□□□□□ -0.95
HDAC4-210ENST00000493582 LYPD2Q6UXB3 125 aa9.1□□□□□ -0.95
HDAC4-210ENST00000493582 CEP250Q9BV73 2442 aa9.1□□□□□ -0.95
HDAC4-210ENST00000493582 H3BVH4 76 aa9.1□□□□□ -0.95
HDAC4-210ENST00000493582 PLGLAQ15195 96 aa9.1□□□□□ -0.95
HDAC4-210ENST00000493582 TEX36Q5VZQ5 186 aa9.1□□□□□ -0.95
HDAC4-210ENST00000493582 PPDPFLQ8WWR9 84 aa9.1□□□□□ -0.95
HDAC4-210ENST00000493582 K7EIM0 57 aa9.09□□□□□ -0.95
HDAC4-210ENST00000493582 TRGV3P03979 118 aa9.09□□□□□ -0.95
HDAC4-210ENST00000493582 LGALS1P09382 135 aaKnown RBP9.09□□□□□ -0.95
HDAC4-210ENST00000493582 NCOR1O75376 2440 aa9.09□□□□□ -0.95
HDAC4-210ENST00000493582 CRYGBP07316 175 aa9.09□□□□□ -0.95
HDAC4-210ENST00000493582 LAGE3Q14657 143 aa9.09□□□□□ -0.95
HDAC4-210ENST00000493582 ZFAND6Q6FIF0 208 aa9.09□□□□□ -0.95
HDAC4-210ENST00000493582 C22orf34Q6ZV56 151 aa9.09□□□□□ -0.95
HDAC4-210ENST00000493582 TEN1Q86WV5 123 aa9.09□□□□□ -0.95
HDAC4-210ENST00000493582 TNFRSF13BO14836 293 aaPredicted RBP9.08□□□□□ -0.96
HDAC4-210ENST00000493582 NHLRC4P0CG21 123 aaPredicted RBP9.08□□□□□ -0.96
HDAC4-210ENST00000493582 Q6ZS92 163 aa9.08□□□□□ -0.96
HDAC4-210ENST00000493582 TEX29Q8N6K0 151 aa9.08□□□□□ -0.96
HDAC4-210ENST00000493582 PLNP26678 52 aa9.08□□□□□ -0.96
HDAC4-210ENST00000493582 SRSF9Q13242 221 aaKnown RBP eCLIP9.08□□□□□ -0.967e-6■■■■□ 20
HDAC4-210ENST00000493582 LINC01559Q495D7 138 aa9.08□□□□□ -0.96
HDAC4-210ENST00000493582 TMEM78Q5T7P6 136 aa9.08□□□□□ -0.96
HDAC4-210ENST00000493582 LINC00311Q8N616 119 aa9.08□□□□□ -0.96
HDAC4-210ENST00000493582 PRSS33Q8NF86 280 aa9.08□□□□□ -0.96
HDAC4-210ENST00000493582 TRBV20-1A0A075B6N2 111 aa9.07□□□□□ -0.96
HDAC4-210ENST00000493582 TCL1BO95988 128 aa9.07□□□□□ -0.96
HDAC4-210ENST00000493582 ERCC8Q13216 396 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms