RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 LINC00477Q96M19 166 aa11.92□□□□□ -0.5
NUP50-218ENST00000493456 C8orf49Q96NF6 230 aa11.92□□□□□ -0.5
NUP50-218ENST00000493456 PRAF2O60831 178 aa11.91□□□□□ -0.5
NUP50-218ENST00000493456 CD300CQ08708 224 aa11.91□□□□□ -0.5
NUP50-218ENST00000493456 FHL2Q14192 279 aa11.91□□□□□ -0.5
NUP50-218ENST00000493456 Q6ZRG5 221 aa11.91□□□□□ -0.5
NUP50-218ENST00000493456 MGST2Q99735 147 aa11.91□□□□□ -0.5
NUP50-218ENST00000493456 DNAJC4Q9NNZ3 241 aa11.91□□□□□ -0.5
NUP50-218ENST00000493456 MRPL16Q9NX20 251 aaKnown RBP11.91□□□□□ -0.5
NUP50-218ENST00000493456 C9orf170A2RU37 121 aa11.9□□□□□ -0.5
NUP50-218ENST00000493456 KRTAP29-1A8MX34 341 aaPredicted RBP11.9□□□□□ -0.5
NUP50-218ENST00000493456 K7EQD1 137 aa11.9□□□□□ -0.5
NUP50-218ENST00000493456 CRYGDP07320 174 aa11.9□□□□□ -0.5
NUP50-218ENST00000493456 NMBP08949 121 aa11.9□□□□□ -0.5
NUP50-218ENST00000493456 CRISP2P16562 243 aa11.9□□□□□ -0.5
NUP50-218ENST00000493456 RNASE4P34096 147 aaKnown RBP11.9□□□□□ -0.5
NUP50-218ENST00000493456 ERCC8Q13216 396 aa11.9□□□□□ -0.5
NUP50-218ENST00000493456 OR1L4Q8NGR5 311 aa11.9□□□□□ -0.5
NUP50-218ENST00000493456 PCNPQ8WW12 178 aaKnown RBP11.9□□□□□ -0.5
NUP50-218ENST00000493456 ARPC5LQ9BPX5 153 aa11.9□□□□□ -0.5
NUP50-218ENST00000493456 BCL7BQ9BQE9 202 aa11.9□□□□□ -0.5
NUP50-218ENST00000493456 MRPL32Q9BYC8 188 aaKnown RBP11.9□□□□□ -0.5
NUP50-218ENST00000493456 SLIRPQ9GZT3 109 aaKnown RBP11.9□□□□□ -0.5
NUP50-218ENST00000493456 PRELID1Q9Y255 219 aa11.9□□□□□ -0.5
NUP50-218ENST00000493456 M0R3E3 92 aa11.89□□□□□ -0.51
NUP50-218ENST00000493456 RGS13O14921 159 aa11.89□□□□□ -0.51
NUP50-218ENST00000493456 PSCAO43653 123 aa11.89□□□□□ -0.51
NUP50-218ENST00000493456 GPX1P07203 203 aa11.89□□□□□ -0.51
NUP50-218ENST00000493456 RAB31Q13636 194 aa11.89□□□□□ -0.51
NUP50-218ENST00000493456 PYDC2Q56P42 97 aa11.89□□□□□ -0.51
NUP50-218ENST00000493456 PFDN5Q99471 154 aa11.89□□□□□ -0.51
NUP50-218ENST00000493456 MRPS26Q9BYN8 205 aaKnown RBP11.89□□□□□ -0.51
NUP50-218ENST00000493456 TRBV19A0A075B6N1 114 aa11.88□□□□□ -0.51
NUP50-218ENST00000493456 IGHV1OR15-1A0A075B7D0 117 aa11.88□□□□□ -0.51
NUP50-218ENST00000493456 TRAV5A0A0B4J249 113 aa11.88□□□□□ -0.51
NUP50-218ENST00000493456 TRGV4A0A0C4DH28 118 aa11.88□□□□□ -0.51
NUP50-218ENST00000493456 SCGB1D2O95969 90 aa11.88□□□□□ -0.51
NUP50-218ENST00000493456 ORM1P02763 201 aa11.88□□□□□ -0.51
NUP50-218ENST00000493456 PLA2G1BP04054 148 aaKnown RBP11.88□□□□□ -0.51
NUP50-218ENST00000493456 CAMLGP49069 296 aa11.88□□□□□ -0.51
NUP50-218ENST00000493456 ARL16Q0P5N6 197 aa11.88□□□□□ -0.51
NUP50-218ENST00000493456 IQCF2Q8IXL9 164 aa11.88□□□□□ -0.51
NUP50-218ENST00000493456 TP53TG3Q9ULZ0 132 aa11.88□□□□□ -0.51
NUP50-218ENST00000493456 LRCOL1A6NCL2 159 aa11.87□□□□□ -0.51
NUP50-218ENST00000493456 E5RGE8 158 aa11.87□□□□□ -0.51
NUP50-218ENST00000493456 C1QBP02746 253 aa11.87□□□□□ -0.51
NUP50-218ENST00000493456 ZNF415Q09FC8 603 aa11.87□□□□□ -0.51
NUP50-218ENST00000493456 PDE6HQ13956 83 aa11.87□□□□□ -0.51
NUP50-218ENST00000493456 C9orf47Q6ZRZ4 202 aa11.87□□□□□ -0.51
NUP50-218ENST00000493456 C12orf45Q8N5I9 185 aaPredicted RBP11.87□□□□□ -0.51
NUP50-218ENST00000493456 TXNDC17Q9BRA2 123 aa11.87□□□□□ -0.51
NUP50-218ENST00000493456 AGPAT4-IT1Q9H0P7 198 aa11.87□□□□□ -0.51
NUP50-218ENST00000493456 RCL1Q9Y2P8 373 aaKnown RBP11.87□□□□□ -0.51
NUP50-218ENST00000493456 LRP1Q07954 4544 aaKnown RBP11.87□□□□□ -0.51
NUP50-218ENST00000493456 GYPEP15421 78 aa11.86□□□□□ -0.51
NUP50-218ENST00000493456 TMBIM6P55061 237 aa11.86□□□□□ -0.51
NUP50-218ENST00000493456 IAH1Q2TAA2 248 aaPredicted RBP11.86□□□□□ -0.51
NUP50-218ENST00000493456 SERTAD4-AS1Q5TG53 156 aa11.86□□□□□ -0.51
NUP50-218ENST00000493456 NRARPQ7Z6K4 114 aa11.86□□□□□ -0.51
NUP50-218ENST00000493456 Q8N814 137 aa11.86□□□□□ -0.51
NUP50-218ENST00000493456 HIST1H1EP10412 219 aaKnown RBP11.85□□□□□ -0.51
NUP50-218ENST00000493456 TMEM78Q5T7P6 136 aa11.85□□□□□ -0.51
NUP50-218ENST00000493456 ZFAND2AQ8N6M9 145 aa11.85□□□□□ -0.51
NUP50-218ENST00000493456 OR10G4Q8NGN3 311 aa11.85□□□□□ -0.51
NUP50-218ENST00000493456 DEFB104AQ8WTQ1 72 aa11.85□□□□□ -0.51
NUP50-218ENST00000493456 SRRQ9GZT4 340 aa11.85□□□□□ -0.51
NUP50-218ENST00000493456 TMEM14CQ9P0S9 112 aa11.85□□□□□ -0.51
NUP50-218ENST00000493456 TIMM9Q9Y5J7 89 aa11.85□□□□□ -0.51
NUP50-218ENST00000493456 FAT3Q8TDW7 4589 aa11.84□□□□□ -0.51
NUP50-218ENST00000493456 C7orf66A4D0T2 115 aa11.84□□□□□ -0.51
NUP50-218ENST00000493456 C9JCJ5 164 aa11.84□□□□□ -0.51
NUP50-218ENST00000493456 NDUFB4O95168 129 aa11.84□□□□□ -0.51
NUP50-218ENST00000493456 PRR9Q5T870 116 aa11.84□□□□□ -0.51
NUP50-218ENST00000493456 MIC13Q5XKP0 118 aa11.84□□□□□ -0.51
NUP50-218ENST00000493456 SYT8Q8NBV8 401 aa11.84□□□□□ -0.51
NUP50-218ENST00000493456 FAM30AQ9NZY2 134 aa11.84□□□□□ -0.51
NUP50-218ENST00000493456 V9GYH0 126 aa11.84□□□□□ -0.51
NUP50-218ENST00000493456 SFTA3P0C7M3 94 aa11.83□□□□□ -0.52
NUP50-218ENST00000493456 SH2D6Q7Z4S9 175 aa11.83□□□□□ -0.52
NUP50-218ENST00000493456 ZNF479Q96JC4 524 aa11.83□□□□□ -0.52
NUP50-218ENST00000493456 AAMDCQ9H7C9 122 aa11.83□□□□□ -0.52
NUP50-218ENST00000493456 GSKIPQ9P0R6 139 aa11.83□□□□□ -0.52
NUP50-218ENST00000493456 IGHV3-38A0A0C4DH36 116 aa11.82□□□□□ -0.52
NUP50-218ENST00000493456 TRBV7-9A0A0J9YWB2 115 aa11.82□□□□□ -0.52
NUP50-218ENST00000493456 NOL3O60936 208 aaKnown RBP11.82□□□□□ -0.52
NUP50-218ENST00000493456 NDUFB6O95139 128 aa11.82□□□□□ -0.52
NUP50-218ENST00000493456 RPL29P47914 159 aaKnown RBP11.82□□□□□ -0.52
NUP50-218ENST00000493456 LINC01556Q5JQF7 62 aa11.82□□□□□ -0.52
NUP50-218ENST00000493456 RASL10AQ92737 203 aa11.82□□□□□ -0.52
NUP50-218ENST00000493456 SLC39A9Q9NUM3 307 aa11.82□□□□□ -0.52
NUP50-218ENST00000493456 ZNF492Q9P255 531 aa11.82□□□□□ -0.52
NUP50-218ENST00000493456 WDR83OSQ9Y284 106 aa11.82□□□□□ -0.52
NUP50-218ENST00000493456 BOLA1Q9Y3E2 137 aa11.82□□□□□ -0.52
NUP50-218ENST00000493456 IGKV2-40A0A087WW87 121 aaPredicted RBP11.81□□□□□ -0.52
NUP50-218ENST00000493456 L7N2F9 121 aa11.81□□□□□ -0.52
NUP50-218ENST00000493456 IGKV2D-40P01614 121 aaPredicted RBP11.81□□□□□ -0.52
NUP50-218ENST00000493456 MBPP02686 304 aaPredicted RBP11.81□□□□□ -0.52
NUP50-218ENST00000493456 TIRAPP58753 221 aa11.81□□□□□ -0.52
NUP50-218ENST00000493456 VAMP2P63027 116 aa11.81□□□□□ -0.52
NUP50-218ENST00000493456 Q6ZQT7 251 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms