RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 OSTCQ9NRP0 149 aa5.5□□□□□ -1.53
HERC4-211ENST00000492996 PGPEP1Q9NXJ5 209 aa5.5□□□□□ -1.53
HERC4-211ENST00000492996 DYNC2H1Q8NCM8 4307 aaKnown RBP5.49□□□□□ -1.53
HERC4-211ENST00000492996 IGHV3OR16-10A0A075B7F0 116 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 A0A1W2PS18 150 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 SH2D7A6NKC9 451 aaPredicted RBP5.49□□□□□ -1.53
HERC4-211ENST00000492996 M0R1W7 72 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 M0R2Z0 102 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 IL4P05112 153 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 YPEL3P61236 119 aaPredicted RBP5.49□□□□□ -1.53
HERC4-211ENST00000492996 Q96MF0 132 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 SLC25A39Q9BZJ4 359 aaPredicted RBP5.49□□□□□ -1.53
HERC4-211ENST00000492996 GP9P14770 177 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 SRIP30626 198 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 HIST2H2BCQ6DN03 193 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 LRRK2Q5S007 2527 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 A1L4Q6 167 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 ODF3BA8MYP8 253 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 CAMPP49913 170 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 KLK9Q2XQG4 91 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 FAM120AOSQ5T036 256 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 CRYBG3Q68DQ2 2970 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 RNF5Q99942 180 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 ST20Q9HBF5 79 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 KLK9Q9UKQ9 250 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 UFC1Q9Y3C8 167 aa5.49□□□□□ -1.53
HERC4-211ENST00000492996 UTP20O75691 2785 aaKnown RBP5.48□□□□□ -1.53
HERC4-211ENST00000492996 hDV102S1A0JD36 115 aa5.48□□□□□ -1.53
HERC4-211ENST00000492996 OR2J3O76001 311 aa5.48□□□□□ -1.53
HERC4-211ENST00000492996 FCGR2BP31994 310 aaPredicted RBP5.48□□□□□ -1.53
HERC4-211ENST00000492996 PVRIGQ6DKI7 326 aa5.48□□□□□ -1.53
HERC4-211ENST00000492996 GOLT1AQ6ZVE7 132 aa5.48□□□□□ -1.53
HERC4-211ENST00000492996 RCHY1Q96PM5 261 aa5.48□□□□□ -1.53
HERC4-211ENST00000492996 NPFFR1Q9GZQ6 430 aa5.48□□□□□ -1.53
HERC4-211ENST00000492996 PSG8Q9UQ74 426 aa5.48□□□□□ -1.53
HERC4-211ENST00000492996 OR4C46A6NHA9 309 aa5.48□□□□□ -1.53
HERC4-211ENST00000492996 BRI3O95415 125 aa5.48□□□□□ -1.53
HERC4-211ENST00000492996 HIST1H1EP10412 219 aaKnown RBP5.48□□□□□ -1.53
HERC4-211ENST00000492996 RNASEKQ6P5S7 137 aaKnown RBP5.48□□□□□ -1.53
HERC4-211ENST00000492996 LINC00322Q6ZN03 302 aaPredicted RBP5.48□□□□□ -1.53
HERC4-211ENST00000492996 ARPC1AQ92747 370 aa5.48□□□□□ -1.53
HERC4-211ENST00000492996 RNF183Q96D59 192 aa5.48□□□□□ -1.53
HERC4-211ENST00000492996 K7EP34 96 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 SMIM17P0DL12 118 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 GPR183P32249 361 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 MYCNOSP40205 109 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 PRNTQ86SH4 94 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 FANCD2OSQ96PS1 177 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 ANAPC13Q9BS18 74 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 ZNF331Q9NQX6 463 aaPredicted RBP5.47□□□□□ -1.53
HERC4-211ENST00000492996 YAE1D1Q9NRH1 226 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 ABCA2Q9BZC7 2435 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 A0A0G2JLM5 398 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 A6NDN8 102 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 M0R3E3 92 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 NDUFA3O95167 84 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 TCRAP04437 139 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 FABP2P12104 132 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 Q0VG73 95 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 ECSCRQ19T08 205 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 TCTEX1D4Q5JR98 221 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 TMEM136Q6ZRR5 245 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 CIARTQ8N365 385 aaPredicted RBP5.47□□□□□ -1.53
HERC4-211ENST00000492996 RNF125Q96EQ8 232 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 GPR82Q96P67 336 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 MRPL16Q9NX20 251 aaKnown RBP5.47□□□□□ -1.53
HERC4-211ENST00000492996 DOPEY2Q9Y3R5 2298 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 TRAV9-1A0A075B6T8 112 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 HIGD1CA8MV81 97 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 B4DSR2 109 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.47□□□□□ -1.53
HERC4-211ENST00000492996 SAA4P35542 130 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 ATP5J2P56134 94 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 ZNF562Q6V9R5 426 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 FA2HQ7L5A8 372 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 NEGR1Q7Z3B1 354 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 BPIFA4PQ86YQ2 179 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 ZNF491Q8N8L2 437 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 NUP35Q8NFH5 326 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 NPBQ8NG41 125 aa5.47□□□□□ -1.53
HERC4-211ENST00000492996 SMIM27A0A1W2PRY6 76 aa5.46□□□□□ -1.53
HERC4-211ENST00000492996 ATP5G2Q06055 141 aa5.46□□□□□ -1.53
HERC4-211ENST00000492996 GNB1LQ9BYB4 327 aa5.46□□□□□ -1.53
HERC4-211ENST00000492996 SIRPDQ9H106 197 aa5.46□□□□□ -1.53
HERC4-211ENST00000492996 ZNF462Q96JM2 2506 aa5.46□□□□□ -1.54
HERC4-211ENST00000492996 IZUMO1RA6ND01 250 aa5.46□□□□□ -1.54
HERC4-211ENST00000492996 AMY1AP04745 511 aa5.46□□□□□ -1.54
HERC4-211ENST00000492996 GAGE5Q13069 117 aa5.46□□□□□ -1.54
HERC4-211ENST00000492996 GAGE6Q13070 117 aa5.46□□□□□ -1.54
HERC4-211ENST00000492996 ANXA2RQ3ZCQ2 193 aa5.46□□□□□ -1.54
HERC4-211ENST00000492996 ADAMTSL5Q6ZMM2 481 aa5.46□□□□□ -1.54
HERC4-211ENST00000492996 OR5A1Q8NGJ0 315 aa5.46□□□□□ -1.54
HERC4-211ENST00000492996 OR11H12B2RN74 326 aa5.46□□□□□ -1.54
HERC4-211ENST00000492996 BMPR1BO00238 502 aa5.46□□□□□ -1.54
HERC4-211ENST00000492996 APCSP02743 223 aa5.46□□□□□ -1.54
HERC4-211ENST00000492996 SPINK8P0C7L1 97 aa5.46□□□□□ -1.54
HERC4-211ENST00000492996 MFAP4P55083 255 aa5.46□□□□□ -1.54
HERC4-211ENST00000492996 TCTAP57738 103 aa5.46□□□□□ -1.54
HERC4-211ENST00000492996 HIST1H1AQ02539 215 aaPredicted RBP5.46□□□□□ -1.54
HERC4-211ENST00000492996 TMEM219Q86XT9 240 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms