RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 FAM19A4Q96LR4 140 aa1.95□□□□□ -2.1
UBR4-215ENST00000492606 TXNDC17Q9BRA2 123 aa1.95□□□□□ -2.1
UBR4-215ENST00000492606 WFDC1Q9HC57 220 aa1.95□□□□□ -2.1
UBR4-215ENST00000492606 DOK5Q9P104 306 aa1.95□□□□□ -2.1
UBR4-215ENST00000492606 IGHV3OR16-9A0A0B4J2B5 98 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 ANKRD65E5RJM6 399 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 GPX2P18283 190 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 PFN2P35080 140 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 UBE2AP49459 152 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 MNAT1P51948 309 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 KRTAP12-2P59991 146 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 KRTAP13-2Q52LG2 175 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 EBLN2Q6P2I7 272 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 ZFP2Q6ZN57 461 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 MRPL55Q7Z7F7 128 aaKnown RBP1.94□□□□□ -2.1
UBR4-215ENST00000492606 Q8N9L7 120 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 OR10G2Q8NGC3 310 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 GALMQ96C23 342 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 C2orf50Q96LR7 162 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 PDCD1LG2Q9BQ51 273 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 SLIRPQ9GZT3 109 aaKnown RBP1.94□□□□□ -2.1
UBR4-215ENST00000492606 OR51E2Q9H255 320 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 KLK12Q9UKR0 248 aa1.94□□□□□ -2.1
UBR4-215ENST00000492606 IGLV4-69A0A075B6H9 119 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 H3BN98 237 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 ITGB1BP1O14713 200 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 CREBL2O60519 120 aaPredicted RBP1.93□□□□□ -2.1
UBR4-215ENST00000492606 NDUFS6O75380 124 aaKnown RBP1.93□□□□□ -2.1
UBR4-215ENST00000492606 E2F6O75461 281 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 ATG12O94817 140 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 HLA-DQA1P01909 254 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 TPM3P06753 285 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 SFTA3P0C7M3 94 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 CD37P11049 281 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 TCP1P17987 556 aaKnown RBP1.93□□□□□ -2.1
UBR4-215ENST00000492606 PMCHP20382 165 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 PRKACBP22694 351 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 KDELR2P33947 212 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 MTPNP58546 118 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 TSPAN5P62079 268 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 ERCC8Q13216 396 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 GINS1Q14691 196 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 ORMDL2Q53FV1 153 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 BCL2L15Q5TBC7 163 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 VTCN1Q7Z7D3 282 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 STX19Q8N4C7 294 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 GDPD1Q8N9F7 314 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 MRPL30Q8TCC3 161 aaKnown RBP1.93□□□□□ -2.1
UBR4-215ENST00000492606 TSKUQ8WUA8 353 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 METTL26Q96S19 204 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 TIMM17AQ99595 171 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 SHANK2-AS3Q9BTD1 123 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 TTTY10Q9BZA0 68 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 VAPAQ9P0L0 249 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 OR52A1Q9UKL2 312 aa1.93□□□□□ -2.1
UBR4-215ENST00000492606 TRAV6A0A075B6T7 132 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 SMIM26A0A096LP01 95 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 MAGEB4O15481 346 aaPredicted RBP1.92□□□□□ -2.1
UBR4-215ENST00000492606 MPDU1O75352 247 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 MBP02144 154 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 ORM1P02763 201 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 TPM1P09493 284 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 STAG3L2P0CL84 134 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 ALOX5APP20292 161 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 EIF2B2P49770 351 aaKnown RBP1.92□□□□□ -2.1
UBR4-215ENST00000492606 AP2S1P53680 142 aaPredicted RBP1.92□□□□□ -2.1
UBR4-215ENST00000492606 MRPS25P82663 173 aaKnown RBP1.92□□□□□ -2.1
UBR4-215ENST00000492606 WT1-ASQ06250 92 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 HMGN3Q15651 99 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 ACSM3Q53FZ2 586 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 TIFABQ6ZNK6 161 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 Q6ZQT7 251 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 LINC01551Q86U37 167 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 CYB561D1Q8N8Q1 229 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 GPR146Q96CH1 333 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 SDHAF2Q9NX18 166 aa1.92□□□□□ -2.1
UBR4-215ENST00000492606 TRGV4A0A0C4DH28 118 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 KRBOX1C9JBD0 128 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.91□□□□□ -2.1
UBR4-215ENST00000492606 H7BYZ3 331 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 I3L2K1 104 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 SPINK4O60575 86 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 RNASE2P10153 161 aaKnown RBP1.91□□□□□ -2.1
UBR4-215ENST00000492606 PSMB3P49720 205 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 RBM11P57052 281 aaKnown RBP1.91□□□□□ -2.1
UBR4-215ENST00000492606 OR10A3P58181 314 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 RPL23P62829 140 aaKnown RBP1.91□□□□□ -2.1
UBR4-215ENST00000492606 KRTAP5-4Q6L8H1 288 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 Q6ZVH6 145 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 NIT1Q86X76 327 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 OR9I1Q8NGQ6 314 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 COQ8AQ8NI60 647 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 MITD1Q8WV92 249 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 SCGB3A2Q96PL1 93 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 MCUBQ9NWR8 336 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 KLF12Q9Y4X4 402 aa1.91□□□□□ -2.1
UBR4-215ENST00000492606 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.9□□□□□ -2.11
UBR4-215ENST00000492606 PGRMC1O00264 195 aaKnown RBP1.9□□□□□ -2.11
UBR4-215ENST00000492606 SC5DO75845 299 aa1.9□□□□□ -2.11
UBR4-215ENST00000492606 OR5AC1P0C628 307 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms