RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 BUB3O43684 328 aa12.47□□□□□ -0.41
SEMA4D-220ENST00000492386 S100A7P31151 101 aa12.47□□□□□ -0.41
SEMA4D-220ENST00000492386 FXYD7P58549 80 aa12.47□□□□□ -0.41
SEMA4D-220ENST00000492386 ERCC8Q13216 396 aa12.47□□□□□ -0.41
SEMA4D-220ENST00000492386 ECSCRQ19T08 205 aa12.47□□□□□ -0.41
SEMA4D-220ENST00000492386 ATP6V0E1O15342 81 aa12.47□□□□□ -0.41
SEMA4D-220ENST00000492386 HBDP02042 147 aa12.47□□□□□ -0.41
SEMA4D-220ENST00000492386 CLEC3BP05452 202 aa12.47□□□□□ -0.41
SEMA4D-220ENST00000492386 LGALS9BQ3B8N2 356 aa12.47□□□□□ -0.41
SEMA4D-220ENST00000492386 LGALS9CQ6DKI2 356 aa12.47□□□□□ -0.41
SEMA4D-220ENST00000492386 DPF1Q92782 380 aa12.47□□□□□ -0.41
SEMA4D-220ENST00000492386 CNFNQ9BYD5 112 aa12.47□□□□□ -0.41
SEMA4D-220ENST00000492386 MSRB1Q9NZV6 116 aa12.47□□□□□ -0.41
SEMA4D-220ENST00000492386 ORM1P02763 201 aa12.46□□□□□ -0.41
SEMA4D-220ENST00000492386 UBE2E1P51965 193 aa12.46□□□□□ -0.41
SEMA4D-220ENST00000492386 ANKRD39Q53RE8 183 aa12.46□□□□□ -0.41
SEMA4D-220ENST00000492386 RNF185Q96GF1 192 aa12.46□□□□□ -0.41
SEMA4D-220ENST00000492386 CLPSL1A2RUU4 121 aa12.45□□□□□ -0.42
SEMA4D-220ENST00000492386 FABP5P3A8MUU1 101 aa12.45□□□□□ -0.42
SEMA4D-220ENST00000492386 FGF6P10767 208 aa12.45□□□□□ -0.42
SEMA4D-220ENST00000492386 UCNP55089 124 aa12.45□□□□□ -0.42
SEMA4D-220ENST00000492386 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.45□□□□□ -0.42
SEMA4D-220ENST00000492386 ERASQ7Z444 233 aa12.45□□□□□ -0.42
SEMA4D-220ENST00000492386 RNF182Q8N6D2 247 aa12.45□□□□□ -0.42
SEMA4D-220ENST00000492386 CCDC140Q96MF4 163 aa12.45□□□□□ -0.42
SEMA4D-220ENST00000492386 SFTPCP11686 197 aa12.45□□□□□ -0.42
SEMA4D-220ENST00000492386 ASH1LQ9NR48 2969 aaKnown RBP12.44□□□□□ -0.42
SEMA4D-220ENST00000492386 SNAI2O43623 268 aa12.44□□□□□ -0.42
SEMA4D-220ENST00000492386 RAB9AP51151 201 aa12.44□□□□□ -0.42
SEMA4D-220ENST00000492386 CACNG7P62955 275 aa12.44□□□□□ -0.42
SEMA4D-220ENST00000492386 VAMP3Q15836 100 aa12.44□□□□□ -0.42
SEMA4D-220ENST00000492386 RBAKDNA6NC62 111 aa12.44□□□□□ -0.42
SEMA4D-220ENST00000492386 LINC01548A6NM66 108 aa12.44□□□□□ -0.42
SEMA4D-220ENST00000492386 SAA4P35542 130 aa12.44□□□□□ -0.42
SEMA4D-220ENST00000492386 LINC01559Q495D7 138 aa12.44□□□□□ -0.42
SEMA4D-220ENST00000492386 PRSS57Q6UWY2 283 aa12.44□□□□□ -0.42
SEMA4D-220ENST00000492386 GAS8-AS1O95177 125 aa12.43□□□□□ -0.42
SEMA4D-220ENST00000492386 NHLH1Q02575 133 aa12.43□□□□□ -0.42
SEMA4D-220ENST00000492386 IL17RELQ6ZVW7 336 aa12.43□□□□□ -0.42
SEMA4D-220ENST00000492386 IGHV3-66A0A0C4DH42 116 aa12.43□□□□□ -0.42
SEMA4D-220ENST00000492386 G3V318 75 aa12.43□□□□□ -0.42
SEMA4D-220ENST00000492386 CD5LO43866 347 aa12.43□□□□□ -0.42
SEMA4D-220ENST00000492386 GOSR1O95249 250 aa12.43□□□□□ -0.42
SEMA4D-220ENST00000492386 CLEC19AQ6UXS0 136 aa12.43□□□□□ -0.42
SEMA4D-220ENST00000492386 OR1N2Q8NGR9 330 aa12.43□□□□□ -0.42
SEMA4D-220ENST00000492386 RNASE8Q8TDE3 154 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-220ENST00000492386 IFI27L1Q96BM0 104 aa12.43□□□□□ -0.42
SEMA4D-220ENST00000492386 NPFFR1Q9GZQ6 430 aa12.43□□□□□ -0.42
SEMA4D-220ENST00000492386 SPTBN1Q01082 2364 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-220ENST00000492386 LINC01546A6NGU7 62 aa12.42□□□□□ -0.42
SEMA4D-220ENST00000492386 K7EP13 123 aa12.42□□□□□ -0.42
SEMA4D-220ENST00000492386 CBY1Q9Y3M2 126 aa12.42□□□□□ -0.42
SEMA4D-220ENST00000492386 CACNA1BQ00975 2339 aa12.42□□□□□ -0.42
SEMA4D-220ENST00000492386 PPBPP02775 128 aa12.42□□□□□ -0.42
SEMA4D-220ENST00000492386 OR4C5Q8NGB2 326 aa12.42□□□□□ -0.42
SEMA4D-220ENST00000492386 SLC50A1Q9BRV3 221 aa12.42□□□□□ -0.42
SEMA4D-220ENST00000492386 COL6A6A6NMZ7 2263 aa12.41□□□□□ -0.42
SEMA4D-220ENST00000492386 IGHV3OR16-13A0A075B7E8 117 aa12.41□□□□□ -0.42
SEMA4D-220ENST00000492386 IGHV3-74A0A0B4J1X5 117 aa12.41□□□□□ -0.42
SEMA4D-220ENST00000492386 TRAV8-2A0A0B4J237 113 aa12.41□□□□□ -0.42
SEMA4D-220ENST00000492386 CBY3A6NI87 242 aa12.41□□□□□ -0.42
SEMA4D-220ENST00000492386 CENPVL3A0A0U1RRI6 287 aa12.41□□□□□ -0.42
SEMA4D-220ENST00000492386 LMO4P61968 165 aa12.41□□□□□ -0.42
SEMA4D-220ENST00000492386 BOD1L2Q8IYS8 172 aa12.41□□□□□ -0.42
SEMA4D-220ENST00000492386 AGPAT4-IT1Q9H0P7 198 aa12.41□□□□□ -0.42
SEMA4D-220ENST00000492386 MAP1LC3AQ9H492 121 aa12.41□□□□□ -0.42
SEMA4D-220ENST00000492386 C11orf21Q9P2W6 132 aa12.41□□□□□ -0.42
SEMA4D-220ENST00000492386 IGKV3D-20A0A0C4DH25 116 aa12.4□□□□□ -0.42
SEMA4D-220ENST00000492386 PPIFP30405 207 aaKnown RBP12.4□□□□□ -0.42
SEMA4D-220ENST00000492386 EFNA4P52798 201 aa12.4□□□□□ -0.42
SEMA4D-220ENST00000492386 TMEM97Q5BJF2 176 aa12.4□□□□□ -0.42
SEMA4D-220ENST00000492386 UBTD1Q9HAC8 227 aa12.4□□□□□ -0.42
SEMA4D-220ENST00000492386 HIVEP3Q5T1R4 2406 aa12.4□□□□□ -0.42
SEMA4D-220ENST00000492386 SVEP1Q4LDE5 3571 aa12.4□□□□□ -0.43
SEMA4D-220ENST00000492386 TNFRSF6BO95407 300 aa12.39□□□□□ -0.43
SEMA4D-220ENST00000492386 WFDC3Q8IUB2 231 aa12.39□□□□□ -0.43
SEMA4D-220ENST00000492386 EEF1AKMT3Q96AZ1 226 aa12.39□□□□□ -0.43
SEMA4D-220ENST00000492386 IGHV3-49A0A0A0MS15 119 aa12.38□□□□□ -0.43
SEMA4D-220ENST00000492386 BPESC1Q9GZL8 116 aa12.38□□□□□ -0.43
SEMA4D-220ENST00000492386 TRBV7-1A0A0A6YYK4 115 aa12.38□□□□□ -0.43
SEMA4D-220ENST00000492386 NPFFO15130 113 aa12.38□□□□□ -0.43
SEMA4D-220ENST00000492386 ZNF207O43670 478 aaKnown RBP12.38□□□□□ -0.43
SEMA4D-220ENST00000492386 TCTAP57738 103 aa12.38□□□□□ -0.43
SEMA4D-220ENST00000492386 AMMECR1LQ6DCA0 310 aa12.38□□□□□ -0.43
SEMA4D-220ENST00000492386 C5orf56Q8N8D9 126 aa12.38□□□□□ -0.43
SEMA4D-220ENST00000492386 DKK2Q9UBU2 259 aa12.38□□□□□ -0.43
SEMA4D-220ENST00000492386 U3KQE9 123 aa12.38□□□□□ -0.43
SEMA4D-220ENST00000492386 SMAD7O15105 426 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-220ENST00000492386 GATA1P15976 413 aaPredicted RBP12.37□□□□□ -0.43
SEMA4D-220ENST00000492386 EVI2AP22794 236 aa12.37□□□□□ -0.43
SEMA4D-220ENST00000492386 RBX1P62877 108 aa12.37□□□□□ -0.43
SEMA4D-220ENST00000492386 SEC11AP67812 179 aa12.37□□□□□ -0.43
SEMA4D-220ENST00000492386 C8orf86Q6ZUL3 223 aa12.37□□□□□ -0.43
SEMA4D-220ENST00000492386 METTL26Q96S19 204 aa12.37□□□□□ -0.43
SEMA4D-220ENST00000492386 FCER1GP30273 86 aa12.37□□□□□ -0.43
SEMA4D-220ENST00000492386 LEPP41159 167 aa12.37□□□□□ -0.43
SEMA4D-220ENST00000492386 MRPL53Q96EL3 112 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-220ENST00000492386 C18orf15Q96N68 181 aa12.37□□□□□ -0.43
SEMA4D-220ENST00000492386 TRAV8-6A0A0B4J262 113 aa12.36□□□□□ -0.43
SEMA4D-220ENST00000492386 NXT2Q9NPJ8 142 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms