RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 SCO2A0A1W2PP80 73 aa10.25□□□□□ -0.77
C9orf3-221ENST00000489562 IGHV4-30-4P0DP06 118 aa10.25□□□□□ -0.77
C9orf3-221ENST00000489562 NUTF2P61970 127 aaKnown RBP10.25□□□□□ -0.77
C9orf3-221ENST00000489562 C2CD4CQ8TF44 421 aa10.25□□□□□ -0.77
C9orf3-221ENST00000489562 FMC1Q96HJ9 113 aa10.25□□□□□ -0.77
C9orf3-221ENST00000489562 CITED4Q96RK1 184 aa10.25□□□□□ -0.77
C9orf3-221ENST00000489562 AGPAT4-IT1Q9H0P7 198 aa10.25□□□□□ -0.77
C9orf3-221ENST00000489562 CMYA5Q8N3K9 4069 aa10.24□□□□□ -0.77
C9orf3-221ENST00000489562 LOC102724200A0A096LPH7 203 aaPredicted RBP10.24□□□□□ -0.77
C9orf3-221ENST00000489562 TRBV6-1A0A0K0K1D8 114 aa10.24□□□□□ -0.77
C9orf3-221ENST00000489562 LINC00862A6NCI5 91 aa10.24□□□□□ -0.77
C9orf3-221ENST00000489562 ZNF705DP0CH99 300 aaPredicted RBP10.24□□□□□ -0.77
C9orf3-221ENST00000489562 ZNF705BP0CI00 300 aaPredicted RBP10.24□□□□□ -0.77
C9orf3-221ENST00000489562 TSPOP30536 169 aa10.24□□□□□ -0.77
C9orf3-221ENST00000489562 ZNF138P52744 262 aa10.24□□□□□ -0.77
C9orf3-221ENST00000489562 UBE2G1P62253 170 aa10.24□□□□□ -0.77
C9orf3-221ENST00000489562 FLI1Q01543 452 aaPredicted RBP10.24□□□□□ -0.77
C9orf3-221ENST00000489562 MORN3Q6PF18 240 aaPredicted RBP10.24□□□□□ -0.77
C9orf3-221ENST00000489562 VGLL1Q99990 258 aa10.24□□□□□ -0.77
C9orf3-221ENST00000489562 ZNF492Q9P255 531 aa10.24□□□□□ -0.77
C9orf3-221ENST00000489562 KLF12Q9Y4X4 402 aa10.24□□□□□ -0.77
C9orf3-221ENST00000489562 KIR2DL5BA0A0G2JN68 375 aa10.23□□□□□ -0.77
C9orf3-221ENST00000489562 KIR2DL5BA0A0G2JPC4 375 aa10.23□□□□□ -0.77
C9orf3-221ENST00000489562 AMBPP02760 352 aa10.23□□□□□ -0.77
C9orf3-221ENST00000489562 LEPP41159 167 aa10.23□□□□□ -0.77
C9orf3-221ENST00000489562 APOC4P55056 127 aa10.23□□□□□ -0.77
C9orf3-221ENST00000489562 ERCC8Q13216 396 aa10.23□□□□□ -0.77
C9orf3-221ENST00000489562 TMEM183BQ1AE95 376 aa10.23□□□□□ -0.77
C9orf3-221ENST00000489562 KIR2DL5AQ8N109 375 aa10.23□□□□□ -0.77
C9orf3-221ENST00000489562 KIR2DL5BQ8NHK3 375 aa10.23□□□□□ -0.77
C9orf3-221ENST00000489562 NDFIP1Q9BT67 221 aa10.23□□□□□ -0.77
C9orf3-221ENST00000489562 PSG8Q9UQ74 426 aa10.23□□□□□ -0.77
C9orf3-221ENST00000489562 TRAV8-1A0A0A6YYK1 113 aa10.22□□□□□ -0.77
C9orf3-221ENST00000489562 K7EIL1 84 aa10.22□□□□□ -0.77
C9orf3-221ENST00000489562 IGLV2-11P01706 119 aa10.22□□□□□ -0.77
C9orf3-221ENST00000489562 CT45A10P0DMU9 189 aa10.22□□□□□ -0.77
C9orf3-221ENST00000489562 TAS2R60P59551 318 aa10.22□□□□□ -0.77
C9orf3-221ENST00000489562 SAPCD1Q5SSQ6 148 aa10.22□□□□□ -0.77
C9orf3-221ENST00000489562 UQCC3Q6UW78 93 aa10.22□□□□□ -0.77
C9orf3-221ENST00000489562 AMTNQ6UX39 209 aa10.22□□□□□ -0.77
C9orf3-221ENST00000489562 Q86TA4 180 aa10.22□□□□□ -0.77
C9orf3-221ENST00000489562 C1QTNF4Q9BXJ3 329 aa10.22□□□□□ -0.77
C9orf3-221ENST00000489562 RBMY1BA6NDE4 496 aaKnown RBP10.21□□□□□ -0.77
C9orf3-221ENST00000489562 RBMY1EA6NEQ0 496 aaKnown RBP10.21□□□□□ -0.77
C9orf3-221ENST00000489562 IGKV3-20P01619 116 aa10.21□□□□□ -0.77
C9orf3-221ENST00000489562 PRB2P02812 416 aaPredicted RBP10.21□□□□□ -0.77
C9orf3-221ENST00000489562 SRP19P09132 144 aaKnown RBP10.21□□□□□ -0.77
C9orf3-221ENST00000489562 RBMY1DP0C7P1 496 aaKnown RBP10.21□□□□□ -0.77
C9orf3-221ENST00000489562 PRB4P10163 310 aaPredicted RBP10.21□□□□□ -0.77
C9orf3-221ENST00000489562 CRISP2P16562 243 aa10.21□□□□□ -0.77
C9orf3-221ENST00000489562 RPL35AP18077 110 aaKnown RBP10.21□□□□□ -0.77
C9orf3-221ENST00000489562 CDKN1BP46527 198 aa10.21□□□□□ -0.77
C9orf3-221ENST00000489562 LINC00322Q6ZN03 302 aaPredicted RBP10.21□□□□□ -0.77
C9orf3-221ENST00000489562 EIF4E3Q8N5X7 224 aaKnown RBP10.21□□□□□ -0.77
C9orf3-221ENST00000489562 FAM19A4Q96LR4 140 aa10.21□□□□□ -0.77
C9orf3-221ENST00000489562 ZFP30Q9Y2G7 519 aa10.21□□□□□ -0.77
C9orf3-221ENST00000489562 TRAV34A0A0B4J273 112 aa10.2□□□□□ -0.78
C9orf3-221ENST00000489562 UBE2CO00762 179 aa10.2□□□□□ -0.78
C9orf3-221ENST00000489562 LTAP01374 205 aa10.2□□□□□ -0.78
C9orf3-221ENST00000489562 RPL35P42766 123 aaKnown RBP10.2□□□□□ -0.78
C9orf3-221ENST00000489562 PRNTQ86SH4 94 aa10.2□□□□□ -0.78
C9orf3-221ENST00000489562 COMMD7Q86VX2 200 aa10.2□□□□□ -0.78
C9orf3-221ENST00000489562 Q8TAT8 98 aa10.2□□□□□ -0.78
C9orf3-221ENST00000489562 SMIM12Q96EX1 92 aa10.2□□□□□ -0.78
C9orf3-221ENST00000489562 LINC00479Q96M42 142 aa10.2□□□□□ -0.78
C9orf3-221ENST00000489562 CSTL1Q9H114 145 aa10.2□□□□□ -0.78
C9orf3-221ENST00000489562 SLC35B3Q9H1N7 401 aa10.2□□□□□ -0.78
C9orf3-221ENST00000489562 TREM1Q9NP99 234 aa10.2□□□□□ -0.78
C9orf3-221ENST00000489562 FRMD6-AS1P0C7T7 363 aa10.19□□□□□ -0.78
C9orf3-221ENST00000489562 SRSF3P84103 164 aaKnown RBP10.19□□□□□ -0.78
C9orf3-221ENST00000489562 SGK494Q96LW2 274 aa10.19□□□□□ -0.78
C9orf3-221ENST00000489562 PARLQ9H300 379 aa10.19□□□□□ -0.78
C9orf3-221ENST00000489562 KLLNB2CW77 178 aa10.18□□□□□ -0.78
C9orf3-221ENST00000489562 C9JCJ5 164 aa10.18□□□□□ -0.78
C9orf3-221ENST00000489562 M0R2Z0 102 aa10.18□□□□□ -0.78
C9orf3-221ENST00000489562 CA1P00915 261 aaPredicted RBP10.18□□□□□ -0.78
C9orf3-221ENST00000489562 GPX1P07203 203 aa10.18□□□□□ -0.78
C9orf3-221ENST00000489562 CEBPGP53567 150 aa10.18□□□□□ -0.78
C9orf3-221ENST00000489562 SPINK13Q1W4C9 94 aa10.18□□□□□ -0.78
C9orf3-221ENST00000489562 FAM74A3Q4VXF1 159 aa10.18□□□□□ -0.78
C9orf3-221ENST00000489562 DEFB121Q5J5C9 76 aa10.18□□□□□ -0.78
C9orf3-221ENST00000489562 BAGE2Q86Y30 109 aa10.18□□□□□ -0.78
C9orf3-221ENST00000489562 ZFAND2AQ8N6M9 145 aa10.18□□□□□ -0.78
C9orf3-221ENST00000489562 MRAPQ8TCY5 172 aa10.18□□□□□ -0.78
C9orf3-221ENST00000489562 C20orf144Q9BQM9 153 aa10.18□□□□□ -0.78
C9orf3-221ENST00000489562 DERL1Q9BUN8 251 aa10.18□□□□□ -0.78
C9orf3-221ENST00000489562 C9JQL5 133 aa10.17□□□□□ -0.78
C9orf3-221ENST00000489562 INSP01308 110 aa10.17□□□□□ -0.78
C9orf3-221ENST00000489562 GNG4P50150 75 aa10.17□□□□□ -0.78
C9orf3-221ENST00000489562 NDUFA5Q16718 116 aa10.17□□□□□ -0.78
C9orf3-221ENST00000489562 ZNF674Q2M3X9 581 aa10.17□□□□□ -0.78
C9orf3-221ENST00000489562 SMUG1Q53HV7 270 aa10.17□□□□□ -0.78
C9orf3-221ENST00000489562 CENPWQ5EE01 88 aa10.17□□□□□ -0.78
C9orf3-221ENST00000489562 SOHLH1Q5JUK2 328 aa10.17□□□□□ -0.78
C9orf3-221ENST00000489562 COX8CQ7Z4L0 72 aa10.17□□□□□ -0.78
C9orf3-221ENST00000489562 TMEM183AQ8IXX5 376 aa10.17□□□□□ -0.78
C9orf3-221ENST00000489562 TVP23CQ96ET8 276 aa10.17□□□□□ -0.78
C9orf3-221ENST00000489562 IGF2BP2-AS1Q96M15 143 aa10.17□□□□□ -0.78
C9orf3-221ENST00000489562 SMIM7Q9BQ49 75 aa10.17□□□□□ -0.78
C9orf3-221ENST00000489562 C7orf71A4D174 169 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms