RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 OR7C2O60412 319 aa17.59■□□□□ 0.41
HMGN1-217ENST00000489072 C9orf47Q6ZRZ4 202 aa17.59■□□□□ 0.41
HMGN1-217ENST00000489072 VGLL1Q99990 258 aa17.59■□□□□ 0.41
HMGN1-217ENST00000489072 CBY3A6NI87 242 aa17.58■□□□□ 0.4
HMGN1-217ENST00000489072 KLLNB2CW77 178 aa17.58■□□□□ 0.4
HMGN1-217ENST00000489072 EIF3GO75821 320 aaKnown RBP eCLIP17.58■□□□□ 0.4
HMGN1-217ENST00000489072 SLC25A5P05141 298 aaKnown RBP17.58■□□□□ 0.4
HMGN1-217ENST00000489072 CCDC28AQ8IWP9 274 aa17.58■□□□□ 0.4
HMGN1-217ENST00000489072 DNAH2Q9P225 4427 aa17.58■□□□□ 0.4
HMGN1-217ENST00000489072 C7orf71A4D174 169 aa17.57■□□□□ 0.4
HMGN1-217ENST00000489072 F5H768 121 aa17.57■□□□□ 0.4
HMGN1-217ENST00000489072 ATP5G1P05496 136 aa17.57■□□□□ 0.4
HMGN1-217ENST00000489072 ATP5G3P48201 142 aa17.57■□□□□ 0.4
HMGN1-217ENST00000489072 CD300CQ08708 224 aa17.57■□□□□ 0.4
HMGN1-217ENST00000489072 BTN1A1Q13410 526 aa17.57■□□□□ 0.4
HMGN1-217ENST00000489072 PYGO2Q9BRQ0 406 aa17.57■□□□□ 0.4
HMGN1-217ENST00000489072 MED28Q9H204 178 aa17.57■□□□□ 0.4
HMGN1-217ENST00000489072 CRISP2P16562 243 aa17.56■□□□□ 0.4
HMGN1-217ENST00000489072 UBE2L3P68036 154 aaKnown RBP17.56■□□□□ 0.4
HMGN1-217ENST00000489072 UBE2DNLQ8IWF7 75 aa17.56■□□□□ 0.4
HMGN1-217ENST00000489072 LINC00612Q8N6U2 182 aa17.56■□□□□ 0.4
HMGN1-217ENST00000489072 ZNF324O75467 553 aaPredicted RBP17.55■□□□□ 0.4
HMGN1-217ENST00000489072 KHDC3LQ587J8 217 aa17.55■□□□□ 0.4
HMGN1-217ENST00000489072 PRR9Q5T870 116 aa17.55■□□□□ 0.4
HMGN1-217ENST00000489072 ZFAND2AQ8N6M9 145 aa17.55■□□□□ 0.4
HMGN1-217ENST00000489072 C15orf53Q8NAA6 179 aa17.55■□□□□ 0.4
HMGN1-217ENST00000489072 DNAH17Q9UFH2 4485 aa17.55■□□□□ 0.4
HMGN1-217ENST00000489072 RNASE4P34096 147 aaKnown RBP17.54■□□□□ 0.4
HMGN1-217ENST00000489072 RANP62826 216 aaKnown RBP17.54■□□□□ 0.4
HMGN1-217ENST00000489072 TMEM78Q5T7P6 136 aa17.54■□□□□ 0.4
HMGN1-217ENST00000489072 Q9H3A6 140 aa17.54■□□□□ 0.4
HMGN1-217ENST00000489072 M0R2N4 97 aa17.53■□□□□ 0.4
HMGN1-217ENST00000489072 TAS2R45P59539 299 aa17.53■□□□□ 0.4
HMGN1-217ENST00000489072 RAB2AP61019 212 aa17.53■□□□□ 0.4
HMGN1-217ENST00000489072 RNF212Q495C1 297 aa17.53■□□□□ 0.4
HMGN1-217ENST00000489072 Q5BKY6 102 aa17.53■□□□□ 0.4
HMGN1-217ENST00000489072 LYPD1Q8N2G4 141 aa17.53■□□□□ 0.4
HMGN1-217ENST00000489072 ZNF492Q9P255 531 aa17.53■□□□□ 0.4
HMGN1-217ENST00000489072 SNURFLB1AK76 121 aa17.52■□□□□ 0.4
HMGN1-217ENST00000489072 GPX1P07203 203 aa17.52■□□□□ 0.4
HMGN1-217ENST00000489072 NMBP08949 121 aa17.52■□□□□ 0.4
HMGN1-217ENST00000489072 ACOT6Q3I5F7 207 aaPredicted RBP17.52■□□□□ 0.4
HMGN1-217ENST00000489072 Q6ZQT7 251 aa17.52■□□□□ 0.4
HMGN1-217ENST00000489072 Q8TAT8 98 aa17.52■□□□□ 0.4
HMGN1-217ENST00000489072 FAT2Q9NYQ8 4349 aa17.52■□□□□ 0.4
HMGN1-217ENST00000489072 GAGE12BA1L429 117 aa17.51■□□□□ 0.39
HMGN1-217ENST00000489072 GAGE7O76087 117 aa17.51■□□□□ 0.39
HMGN1-217ENST00000489072 GAGE12FP0CL80 117 aa17.51■□□□□ 0.39
HMGN1-217ENST00000489072 GAGE12GP0CL81 117 aa17.51■□□□□ 0.39
HMGN1-217ENST00000489072 GAGE12IP0CL82 117 aa17.51■□□□□ 0.39
HMGN1-217ENST00000489072 M6PRP20645 277 aa17.51■□□□□ 0.39
HMGN1-217ENST00000489072 C11orf72Q8NBR9 251 aa17.51■□□□□ 0.39
HMGN1-217ENST00000489072 AQP10Q96PS8 301 aa17.51■□□□□ 0.39
HMGN1-217ENST00000489072 LINC00467Q9BRT7 94 aa17.51■□□□□ 0.39
HMGN1-217ENST00000489072 ZNF138P52744 262 aa17.5■□□□□ 0.39
HMGN1-217ENST00000489072 DAZ2Q13117 558 aaKnown RBP17.5■□□□□ 0.39
HMGN1-217ENST00000489072 GSN-AS1Q9NRJ2 163 aa17.5■□□□□ 0.39
HMGN1-217ENST00000489072 IGLV2-18A0A075B6J9 118 aa17.49■□□□□ 0.39
HMGN1-217ENST00000489072 GIPP09681 153 aaPredicted RBP17.49■□□□□ 0.39
HMGN1-217ENST00000489072 CSN1S1P47710 185 aa17.49■□□□□ 0.39
HMGN1-217ENST00000489072 EIF4E3Q8N5X7 224 aaKnown RBP17.49■□□□□ 0.39
HMGN1-217ENST00000489072 RBAKDNA6NC62 111 aa17.48■□□□□ 0.39
HMGN1-217ENST00000489072 NUDT3O95989 172 aa17.48■□□□□ 0.39
HMGN1-217ENST00000489072 LGALS9BQ3B8N2 356 aa17.48■□□□□ 0.39
HMGN1-217ENST00000489072 ANXA2RQ3ZCQ2 193 aa17.48■□□□□ 0.39
HMGN1-217ENST00000489072 Q6ZTI0 123 aa17.48■□□□□ 0.39
HMGN1-217ENST00000489072 HSD17B11Q8NBQ5 300 aa17.48■□□□□ 0.39
HMGN1-217ENST00000489072 ZNF680Q8NEM1 530 aa17.48■□□□□ 0.39
HMGN1-217ENST00000489072 A0A1W2PPV4 95 aa17.47■□□□□ 0.39
HMGN1-217ENST00000489072 DIRC3C9JPN6 131 aa17.47■□□□□ 0.39
HMGN1-217ENST00000489072 HOXA5P20719 270 aa17.47■□□□□ 0.39
HMGN1-217ENST00000489072 Q6ZR54 194 aa17.47■□□□□ 0.39
HMGN1-217ENST00000489072 OR10G4Q8NGN3 311 aa17.47■□□□□ 0.39
HMGN1-217ENST00000489072 OR10G9Q8NGN4 311 aa17.47■□□□□ 0.39
HMGN1-217ENST00000489072 OR10G7Q8NGN6 311 aa17.47■□□□□ 0.39
HMGN1-217ENST00000489072 TRBV7-9A0A0J9YWB2 115 aa17.46■□□□□ 0.39
HMGN1-217ENST00000489072 HMGB3O15347 200 aaKnown RBP17.46■□□□□ 0.39
HMGN1-217ENST00000489072 ZNF266Q14584 549 aa17.46■□□□□ 0.39
HMGN1-217ENST00000489072 PQLC2Q6ZP29 291 aa17.46■□□□□ 0.39
HMGN1-217ENST00000489072 OR2G3Q8NGZ4 309 aa17.46■□□□□ 0.39
HMGN1-217ENST00000489072 HYLS1Q96M11 299 aa17.46■□□□□ 0.39
HMGN1-217ENST00000489072 OTORQ9NRC9 128 aa17.46■□□□□ 0.39
HMGN1-217ENST00000489072 TP53TG3Q9ULZ0 132 aa17.46■□□□□ 0.39
HMGN1-217ENST00000489072 OR5I1Q13606 314 aa17.45■□□□□ 0.38
HMGN1-217ENST00000489072 ASB13Q8WXK3 278 aa17.45■□□□□ 0.38
HMGN1-217ENST00000489072 TMPRSS5Q9H3S3 457 aa17.45■□□□□ 0.38
HMGN1-217ENST00000489072 KLF12Q9Y4X4 402 aa17.45■□□□□ 0.38
HMGN1-217ENST00000489072 MUC4Q99102 2169 aa17.45■□□□□ 0.38
HMGN1-217ENST00000489072 IGHV1OR15-1A0A075B7D0 117 aa17.44■□□□□ 0.38
HMGN1-217ENST00000489072 PGPA6NDG6 321 aa17.44■□□□□ 0.38
HMGN1-217ENST00000489072 RGS13O14921 159 aa17.44■□□□□ 0.38
HMGN1-217ENST00000489072 RTL8CO15255 209 aa17.44■□□□□ 0.38
HMGN1-217ENST00000489072 ATP6V0CP27449 155 aa17.44■□□□□ 0.38
HMGN1-217ENST00000489072 RXFP4Q8TDU9 374 aa17.44■□□□□ 0.38
HMGN1-217ENST00000489072 ATG101Q9BSB4 218 aa17.44■□□□□ 0.38
HMGN1-217ENST00000489072 PSMG3Q9BT73 122 aaPredicted RBP17.44■□□□□ 0.38
HMGN1-217ENST00000489072 TRAV26-1A0A087WT03 109 aa17.43■□□□□ 0.38
HMGN1-217ENST00000489072 TCL1AP56279 114 aa17.43■□□□□ 0.38
HMGN1-217ENST00000489072 LINC00336Q6ZUF6 198 aa17.43■□□□□ 0.38
HMGN1-217ENST00000489072 RNF222A6NCQ9 220 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms