RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 PAFAH1B2P68402 229 aa5.2□□□□□ -1.58
PDAP1-203ENST00000488214 CD300EQ496F6 205 aaPredicted RBP5.2□□□□□ -1.58
PDAP1-203ENST00000488214 TMEM78Q5T7P6 136 aa5.2□□□□□ -1.58
PDAP1-203ENST00000488214 TMEM183AQ8IXX5 376 aa5.2□□□□□ -1.58
PDAP1-203ENST00000488214 ARL6IP6Q8N6S5 226 aa5.2□□□□□ -1.58
PDAP1-203ENST00000488214 C15orf54Q8N8G6 183 aa5.2□□□□□ -1.58
PDAP1-203ENST00000488214 OR10G8Q8NGN5 311 aa5.2□□□□□ -1.58
PDAP1-203ENST00000488214 OR10J6PQ8NGY7 276 aa5.2□□□□□ -1.58
PDAP1-203ENST00000488214 SMIM12Q96EX1 92 aa5.2□□□□□ -1.58
PDAP1-203ENST00000488214 CITED1Q99966 193 aa5.2□□□□□ -1.58
PDAP1-203ENST00000488214 GPR61Q9BZJ8 451 aa5.2□□□□□ -1.58
PDAP1-203ENST00000488214 RNASE7Q9H1E1 156 aaKnown RBP5.2□□□□□ -1.58
PDAP1-203ENST00000488214 SMCO4Q9NRQ5 59 aa5.2□□□□□ -1.58
PDAP1-203ENST00000488214 URGCP-MRPS24S4R325 110 aa5.2□□□□□ -1.58
PDAP1-203ENST00000488214 RBAKDNA6NC62 111 aa5.19□□□□□ -1.58
PDAP1-203ENST00000488214 OR4C46A6NHA9 309 aa5.19□□□□□ -1.58
PDAP1-203ENST00000488214 PPP1R2P9O14990 202 aa5.19□□□□□ -1.58
PDAP1-203ENST00000488214 GCGP01275 180 aa5.19□□□□□ -1.58
PDAP1-203ENST00000488214 IBA57Q5T440 356 aaKnown RBP5.19□□□□□ -1.58
PDAP1-203ENST00000488214 PRIMA1Q86XR5 153 aa5.19□□□□□ -1.58
PDAP1-203ENST00000488214 LINC00482Q8N8I6 264 aa5.19□□□□□ -1.58
PDAP1-203ENST00000488214 OR8A1Q8NGG7 326 aa5.19□□□□□ -1.58
PDAP1-203ENST00000488214 ANAPC16Q96DE5 110 aa5.19□□□□□ -1.58
PDAP1-203ENST00000488214 ZC2HC1AQ96GY0 325 aa5.19□□□□□ -1.58
PDAP1-203ENST00000488214 CTDSP1Q9GZU7 261 aa5.19□□□□□ -1.58
PDAP1-203ENST00000488214 BIN3Q9NQY0 253 aa5.19□□□□□ -1.58
PDAP1-203ENST00000488214 TRAV2A0A0B4J234 112 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 A0A1W2PPQ1 181 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 IZUMO1RA6ND01 250 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 ZNF705GA8MUZ8 300 aaPredicted RBP5.18□□□□□ -1.58
PDAP1-203ENST00000488214 NPIPB6E9PJ23 425 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 GATCO43716 136 aaKnown RBP5.18□□□□□ -1.58
PDAP1-203ENST00000488214 CA1P00915 261 aaPredicted RBP5.18□□□□□ -1.58
PDAP1-203ENST00000488214 P01737 135 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 CD33P20138 364 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 S100PP25815 95 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 ZNF138P52744 262 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 DEFB114Q30KQ6 69 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 SAPCD1Q5SSQ6 148 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 PRR25Q96S07 402 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 SPAG8Q99932 426 aaPredicted RBP5.18□□□□□ -1.58
PDAP1-203ENST00000488214 AGPAT4-IT1Q9H0P7 198 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 MAP6D1Q9H9H5 199 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 OSTCQ9NRP0 149 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 SIGLEC8Q9NYZ4 499 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 ZNF492Q9P255 531 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 ZFP30Q9Y2G7 519 aa5.18□□□□□ -1.58
PDAP1-203ENST00000488214 AGRNO00468 2067 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 ATRQ13535 2644 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 TGIF2-C20orf24A0A0A6YYL0 155 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 TRAV25A0A0B4J276 109 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 J3KRW8 73 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 SH2D1AO60880 128 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 TCL1AP56279 114 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 DEFB131AP59861 70 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 SMUG1Q53HV7 270 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 GDF5OSQ5U4N7 250 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 EBLN2Q6P2I7 272 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 KCNIP4Q6PIL6 250 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 C12orf54Q6X4T0 127 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 LINC00322Q6ZN03 302 aaPredicted RBP5.17□□□□□ -1.58
PDAP1-203ENST00000488214 FOXI2Q6ZQN5 318 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 C9orf47Q6ZRZ4 202 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 FAM231DQ6ZW35 169 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 DAZAP1Q96EP5 407 aaKnown RBP5.17□□□□□ -1.58
PDAP1-203ENST00000488214 MLST8Q9BVC4 326 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 RPP21Q9H633 154 aaKnown RBP5.17□□□□□ -1.58
PDAP1-203ENST00000488214 V9GYV3 84 aa5.17□□□□□ -1.58
PDAP1-203ENST00000488214 TENM1Q9UKZ4 2725 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 A0A0J9YX75 114 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 C19orf71A6NCJ1 209 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 CXorf65A6NEN9 183 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 KNCNA6PVL3 124 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 IGKV3-20P01619 116 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 IGLV1-51P01701 117 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 RPL19P84098 196 aaKnown RBP5.16□□□□□ -1.58
PDAP1-203ENST00000488214 ELOBQ15370 118 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 ZNF124Q15973 351 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 FAM162BQ5T6X4 162 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 PRR9Q5T870 116 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 C3orf56Q8N813 242 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 NUDT10Q8NFP7 164 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 OR4B1Q8NGF8 309 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 OR2D3Q8NGH3 330 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 OR2K2Q8NGT1 345 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 SPATA3Q8NHX4 192 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 NUDT11Q96G61 164 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 LINC00477Q96M19 166 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 SAV1Q9H4B6 383 aaPredicted RBP5.16□□□□□ -1.58
PDAP1-203ENST00000488214 TMEM242Q9NWH2 141 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 PPP1R14DQ9NXH3 145 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 IL36BQ9NZH7 164 aa5.16□□□□□ -1.58
PDAP1-203ENST00000488214 TMA7Q9Y2S6 64 aaKnown RBP5.16□□□□□ -1.58
PDAP1-203ENST00000488214 NIPBLQ6KC79 2804 aaeCLIP5.16□□□□□ -1.58
PDAP1-203ENST00000488214 TMSB15BA0A087X1C1 80 aa5.15□□□□□ -1.59
PDAP1-203ENST00000488214 OR11H12B2RN74 326 aa5.15□□□□□ -1.59
PDAP1-203ENST00000488214 DUSP14O95147 198 aaKnown RBP5.15□□□□□ -1.59
PDAP1-203ENST00000488214 CXCL1P09341 107 aa5.15□□□□□ -1.59
PDAP1-203ENST00000488214 HLA-DRB4P13762 266 aa5.15□□□□□ -1.59
PDAP1-203ENST00000488214 LEPP41159 167 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms