RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 VCX3AQ9NNX9 186 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 CCDC59Q9P031 241 aaKnown RBP1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 C14orf166Q9Y224 244 aaKnown RBP1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 YTHDF2Q9Y5A9 579 aaKnown RBP1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 ABCA13Q86UQ4 5058 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 IGKV1D-37A0A075B6S9 117 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 TRAV4A0A0B4J268 109 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 PNMA8CA0A1B0GUJ8 204 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 NAP1L6A6NFF2 107 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 F8WDY8 70 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 GAGE7O76087 117 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 APOHP02749 345 aaPredicted RBP1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 PRH1P02810 166 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 PFN1P07737 140 aaKnown RBP1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 GAGE12FP0CL80 117 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 GAGE12GP0CL81 117 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 GAGE12IP0CL82 117 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 NFYAP23511 347 aaPredicted RBP1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 FAUP35544 74 aaKnown RBP1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 AP3S2P59780 193 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 GAGE1Q13065 139 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 GAGE4Q13068 117 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 ATP6V1FQ16864 119 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 PSMG4Q5JS54 123 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 ACTL10Q5JWF8 245 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 ZFP2Q6ZN57 461 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 COX8CQ7Z4L0 72 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 SELENOHQ8IZQ5 122 aaKnown RBP1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 Q8N976 141 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 OR8A1Q8NGG7 326 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 OR1L4Q8NGR5 311 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 COQ8AQ8NI60 647 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 YIPF6Q96EC8 236 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 SMIM8Q96KF7 97 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 SLC25A21Q9BQT8 299 aaPredicted RBP1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 MRPL32Q9BYC8 188 aaKnown RBP1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 PRO0255Q9UI72 69 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 KCNIP3Q9Y2W7 256 aa1.84□□□□□ -2.11
DEPDC1-203ENST00000488146 A0A075B6Q4 140 aa1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 TRAV8-3A0A0A6YYJ7 113 aa1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 TRBV6-1A0A0K0K1D8 114 aa1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 SMIM31A0A1B0GVY4 71 aa1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 LRCOL1A6NCL2 159 aa1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 NOL3O60936 208 aaKnown RBP1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 OR4E1P0C645 316 aa1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 EVI2AP22794 236 aa1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 OPRK1P41145 380 aa1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 TMEM69Q5SWH9 247 aa1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 Q6AWC8 147 aa1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 KCNIP4Q6PIL6 250 aa1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 BPIFB6Q8NFQ5 453 aa1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 GPR146Q96CH1 333 aa1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 GNPNAT1Q96EK6 184 aaPredicted RBP1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 KLF12Q9Y4X4 402 aa1.84□□□□□ -2.12
DEPDC1-203ENST00000488146 DNAH5Q8TE73 4624 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 STAB2Q8WWQ8 2551 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 A0A0U1RQV1 116 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 RNF222A6NCQ9 220 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 TMEM235A6NFC5 223 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 KNCNA6PVL3 124 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 SNRPGP15A8MWD9 76 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 C9JCJ5 164 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 KRASP01116 189 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 ZNF688P0C7X2 276 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 HIST1H1EP10412 219 aaKnown RBP1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 G6PCP35575 357 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 KRTAP10-4P60372 401 aaPredicted RBP1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 Q0VG73 95 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 RNASE10Q5GAN6 216 aaKnown RBP1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 LELP1Q5T871 98 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 KRTAP5-4Q6L8H1 288 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 LINC00299Q6ZSB3 139 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 CYP2G1PQ6ZSU1 146 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 FAM24BQ8N5W8 94 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 Q8N814 137 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 C11orf72Q8NBR9 251 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 DYNC2LI1Q8TCX1 351 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 NUDCD2Q8WVJ2 157 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 PCNPQ8WW12 178 aaKnown RBP1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 RASL10AQ92737 203 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 COPZ2Q9P299 210 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 HIGD1AQ9Y241 93 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 A0A096LPF7 62 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 TRAV8-2A0A0B4J237 113 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 TRBV6-4A0A1B0GX49 114 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 C7orf71A4D174 169 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 RS1O15537 224 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 HYPMO75409 117 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 IL4P05112 153 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 AKAIN1P0CW23 69 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 RND2P52198 227 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 CRYBA4P53673 196 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 FGF8P55075 233 aaPredicted RBP1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 MXD1Q05195 221 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 IDO2Q6ZQW0 420 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 SSX7Q7RTT5 188 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 NEGR1Q7Z3B1 354 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 ATP6V0E2Q8NHE4 81 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 SMIM4Q8WVI0 70 aa1.83□□□□□ -2.12
DEPDC1-203ENST00000488146 LINC00479Q96M42 142 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms