RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 IGKCP01834 107 aa9.11□□□□□ -0.95
SEC61A1-205ENST00000483956 TCRAP04437 139 aa9.11□□□□□ -0.95
SEC61A1-205ENST00000483956 GP9P14770 177 aa9.11□□□□□ -0.95
SEC61A1-205ENST00000483956 GAGE2BQ13066 116 aa9.11□□□□□ -0.95
SEC61A1-205ENST00000483956 GAGE2EQ4V326 116 aa9.11□□□□□ -0.95
SEC61A1-205ENST00000483956 C10orf55Q5SWW7 151 aa9.11□□□□□ -0.95
SEC61A1-205ENST00000483956 LINC00311Q8N616 119 aa9.11□□□□□ -0.95
SEC61A1-205ENST00000483956 ZMAT4Q9H898 229 aa9.11□□□□□ -0.95
SEC61A1-205ENST00000483956 GAGE2DQ9UEU5 116 aa9.11□□□□□ -0.95
SEC61A1-205ENST00000483956 THBDP07204 575 aa9.11□□□□□ -0.95
SEC61A1-205ENST00000483956 ZFP2Q6ZN57 461 aa9.11□□□□□ -0.95
SEC61A1-205ENST00000483956 PRNTQ86SH4 94 aa9.11□□□□□ -0.95
SEC61A1-205ENST00000483956 TRAV4A0A0B4J268 109 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 Q86TA4 180 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 GATD1Q8NB37 220 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 LOC107984156A0A0G2JMH3 177 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 A0A1W2PPI3 338 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 TMEM213A2RRL7 107 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 ZNF785A8K8V0 405 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 PRSS1P07477 247 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 TTC32Q5I0X7 151 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 ARL17AQ8IVW1 177 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 ORMDL3Q8N138 153 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 CEP250Q9BV73 2442 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 SVILO95425 2214 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 CENPVL3A0A0U1RRI6 287 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 CRLF1O75462 422 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 ORM2P19652 201 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 EVI2AP22794 236 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 TAL2Q16559 108 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 TMEM190Q8WZ59 177 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 TMEM158Q8WZ71 300 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 RAB1BQ9H0U4 201 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 FBXL15Q9H469 300 aa9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 SPENQ96T58 3664 aaKnown RBP9.1□□□□□ -0.95
SEC61A1-205ENST00000483956 PLCE1Q9P212 2302 aa9.09□□□□□ -0.95
SEC61A1-205ENST00000483956 TRBV7-3A0A075B6L6 115 aa9.09□□□□□ -0.95
SEC61A1-205ENST00000483956 IL4P05112 153 aa9.09□□□□□ -0.95
SEC61A1-205ENST00000483956 IFITM1P13164 125 aa9.09□□□□□ -0.95
SEC61A1-205ENST00000483956 VMA21Q3ZAQ7 101 aa9.09□□□□□ -0.95
SEC61A1-205ENST00000483956 HOXA3O43365 443 aaPredicted RBP9.09□□□□□ -0.95
SEC61A1-205ENST00000483956 NPYP01303 97 aa9.09□□□□□ -0.95
SEC61A1-205ENST00000483956 CCL3L1P16619 93 aa9.09□□□□□ -0.95
SEC61A1-205ENST00000483956 MRGPRG-AS1Q2M3A8 158 aa9.09□□□□□ -0.95
SEC61A1-205ENST00000483956 C3orf56Q8N813 242 aa9.09□□□□□ -0.95
SEC61A1-205ENST00000483956 FOXC2Q99958 501 aa9.09□□□□□ -0.95
SEC61A1-205ENST00000483956 Q9H3A6 140 aa9.09□□□□□ -0.95
SEC61A1-205ENST00000483956 MAP1LC3AQ9H492 121 aa9.09□□□□□ -0.95
SEC61A1-205ENST00000483956 TMEM160Q9NX00 188 aa9.09□□□□□ -0.95
SEC61A1-205ENST00000483956 U3KQK5 164 aa9.09□□□□□ -0.95
SEC61A1-205ENST00000483956 TMEM8BA6NDV4 472 aa9.08□□□□□ -0.96
SEC61A1-205ENST00000483956 WT1P19544 449 aaPredicted RBP9.08□□□□□ -0.96
SEC61A1-205ENST00000483956 TMEM200BQ69YZ2 307 aa9.08□□□□□ -0.96
SEC61A1-205ENST00000483956 RP1L1Q8IWN7 2480 aaPredicted RBP9.08□□□□□ -0.96
SEC61A1-205ENST00000483956 ZFHX4Q86UP3 3567 aa9.08□□□□□ -0.96
SEC61A1-205ENST00000483956 TRBV6-1A0A0K0K1D8 114 aa9.08□□□□□ -0.96
SEC61A1-205ENST00000483956 SHISA9B4DS77 424 aa9.08□□□□□ -0.96
SEC61A1-205ENST00000483956 HOXB4P17483 251 aaPredicted RBP9.08□□□□□ -0.96
SEC61A1-205ENST00000483956 MRPL51Q4U2R6 128 aaKnown RBP9.08□□□□□ -0.96
SEC61A1-205ENST00000483956 FAM104BQ5XKR9 115 aa9.08□□□□□ -0.96
SEC61A1-205ENST00000483956 NUP37Q8NFH4 326 aa9.08□□□□□ -0.96
SEC61A1-205ENST00000483956 VCX2Q9H322 139 aa9.08□□□□□ -0.96
SEC61A1-205ENST00000483956 FCN3O75636 299 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 SNCGO76070 127 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 DPM2O94777 84 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 TNFRSF1AP19438 455 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 PSMG4Q5JS54 123 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 MEIG1Q5JSS6 88 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 RUSC1-AS1Q66K80 236 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 OTORQ9NRC9 128 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 FAM215AQ9Y5M1 114 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 TRAV40A0A0B4J280 105 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 LINC01549A6NIU2 74 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 H3BVH4 76 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 ZNF493Q6ZR52 646 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 GOLT1AQ6ZVE7 132 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 ANKRD29Q8N6D5 301 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 RPEQ96AT9 228 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 TMEM14CQ9P0S9 112 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 TMEM262E9PQX1 116 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 TGFAP01135 160 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 CD40P25942 277 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 LEPP41159 167 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 TPSG1Q9NRR2 321 aa9.07□□□□□ -0.96
SEC61A1-205ENST00000483956 IGLV2-11P01706 119 aa9.06□□□□□ -0.96
SEC61A1-205ENST00000483956 Q6ZQT7 251 aa9.06□□□□□ -0.96
SEC61A1-205ENST00000483956 CKS2P33552 79 aa9.06□□□□□ -0.96
SEC61A1-205ENST00000483956 PIP4P1Q86T03 277 aa9.06□□□□□ -0.96
SEC61A1-205ENST00000483956 HLA-DRB4P13762 266 aa9.05□□□□□ -0.96
SEC61A1-205ENST00000483956 PPP1R27Q86WC6 154 aa9.05□□□□□ -0.96
SEC61A1-205ENST00000483956 HLA-DRB4X5D2U9 266 aa9.05□□□□□ -0.96
SEC61A1-205ENST00000483956 ICE1Q9Y2F5 2266 aa9.05□□□□□ -0.96
SEC61A1-205ENST00000483956 A8MWV9 139 aa9.05□□□□□ -0.96
SEC61A1-205ENST00000483956 CEACAM4O75871 244 aa9.05□□□□□ -0.96
SEC61A1-205ENST00000483956 CCL8P80075 99 aa9.05□□□□□ -0.96
SEC61A1-205ENST00000483956 HCP5Q6MZN7 132 aa9.05□□□□□ -0.96
SEC61A1-205ENST00000483956 LYZL1Q6UWQ5 148 aa9.05□□□□□ -0.96
SEC61A1-205ENST00000483956 MRPL35Q9NZE8 188 aaKnown RBP9.05□□□□□ -0.96
SEC61A1-205ENST00000483956 HIGD1AQ9Y241 93 aa9.05□□□□□ -0.96
SEC61A1-205ENST00000483956 C17orf100A8MU93 164 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms