RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 C4orf3Q8WVX3 66 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 CLEC2BQ92478 149 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 PSMF1Q92530 271 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 CIB3Q96Q77 187 aaPredicted RBP1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 NIT2Q9NQR4 276 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 RPL26L1Q9UNX3 145 aaKnown RBP1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 A2ML1A8K2U0 1454 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 MYOM2P54296 1465 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 THADAQ6YHU6 1953 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 MYH7BA7E2Y1 1941 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 IGKV1D-42A0A075B6H8 117 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 TMSB15BA0A087X1C1 80 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 TRAV2A0A0B4J234 112 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 A0A1B0GVG6 124 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 PVALEFA0A1B0GWK0 134 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 TMEM218A2RU14 115 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 ZNF736B4DX44 427 aaPredicted RBP1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 ZNF737O75373 536 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 IGLV6-57P01721 117 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 CD3DP04234 171 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 SHBGP04278 402 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 DEFA4P12838 97 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 TPPP2P59282 170 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 SS18Q15532 418 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 ZNF791Q3KP31 576 aaPredicted RBP1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 CLLU1Q5K131 121 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 ATP11AUNQ6ZP68 121 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 GTF2H5Q6ZYL4 71 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 ARPINQ7Z6K5 226 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 Q8IYB0 196 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 Q8N814 137 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 OR4X2Q8NGF9 303 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 ATP6V0E2Q8NHE4 81 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 OTOSQ8NHW6 89 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 DPH3Q96FX2 82 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 C20orf166-AS1Q96NR2 134 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 RPRMQ9NS64 109 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 PRO2289Q9P1D8 64 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 CRCT1Q9UGL9 99 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 SYNJ1O43426 1573 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 RB1CC1Q8TDY2 1594 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 CFTRP13569 1480 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 ZNF609O15014 1411 aa1.49□□□□□ -2.17
LAPTM4A-202ENST00000483117 PTPRSQ13332 1948 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 KTN1Q86UP2 1357 aaKnown RBP1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 COL5A1P20908 1838 aaPredicted RBP1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 SLX4Q8IY92 1834 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 TRAV30A0A087WSZ9 112 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 ZNF705FA8MVS1 300 aaPredicted RBP1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 FNDC10F2Z333 226 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 M0R143 59 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 SNAPC5O75971 98 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 ERC2-IT1O76042 136 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 IGLV1-51P01701 117 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 CRPP02741 224 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 CD2P06729 351 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 CTSGP08311 255 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 ASAH2BP0C7U1 165 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 GNG2P59768 71 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 ELOBQ15370 118 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 Q56UQ5 140 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 PRR9Q5T870 116 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 SMIM7Q9BQ49 75 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 CST11Q9H112 138 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 TAS2R8Q9NYW2 309 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 LSM2Q9Y333 95 aaKnown RBP1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 LHFPL6Q9Y693 200 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 SLIT2O94813 1529 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 N4BP2Q86UW6 1770 aaPredicted RBP1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 PHLPP1O60346 1717 aa1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 FCGBPQ9Y6R7 5405 aaPredicted RBP1.48□□□□□ -2.17
LAPTM4A-202ENST00000483117 ADGRB1O14514 1584 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 FANCMQ8IYD8 2048 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 EML6Q6ZMW3 1958 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 WDR90Q96KV7 1748 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 SHANK3Q9BYB0 1731 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 TRAV3A0A0B4J244 114 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 TRAV12-1A0A0B4J245 112 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 PIGBOS1A0A0B4J2F0 54 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 IGHV1-24A0A0C4DH33 117 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 TCRBV4S1A1TA0A5B7 111 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 IBA57-AS1B1ANH7 110 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 J3QLW9 94 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 APOC4-APOC2K7ER74 178 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 APOC2P02655 101 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 CD14P08571 375 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 SSR2P43308 183 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 PKIAP61925 76 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 ZNF846Q147U1 533 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 KRTAP13-2Q52LG2 175 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 C12orf73Q69YU5 71 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 CASC2Q6XLA1 102 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 Q6ZUT4 128 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 Q8N2B8 174 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 SFT2D1Q8WV19 159 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 NABP2Q9BQ15 211 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 FKBP11Q9NYL4 201 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 CCL26Q9Y258 94 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 CHCHD2Q9Y6H1 151 aaPredicted RBP1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 CDK5RAP2Q96SN8 1893 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 318.7 ms