RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 IGKV2-40A0A087WW87 121 aaPredicted RBP19.4■□□□□ 0.7
CCM2-211ENST00000478582 IGKV2D-40P01614 121 aaPredicted RBP19.4■□□□□ 0.7
CCM2-211ENST00000478582 IQCF2Q8IXL9 164 aa19.4■□□□□ 0.7
CCM2-211ENST00000478582 C1orf158Q8N1D5 194 aa19.4■□□□□ 0.7
CCM2-211ENST00000478582 IL17DQ8TAD2 202 aa19.4■□□□□ 0.7
CCM2-211ENST00000478582 CMTM2Q8TAZ6 248 aa19.4■□□□□ 0.7
CCM2-211ENST00000478582 NEU1Q99519 415 aa19.4■□□□□ 0.7
CCM2-211ENST00000478582 SULT1A2P50226 295 aa19.39■□□□□ 0.69
CCM2-211ENST00000478582 FAM19A4Q96LR4 140 aa19.39■□□□□ 0.69
CCM2-211ENST00000478582 VGLL1Q99990 258 aa19.39■□□□□ 0.69
CCM2-211ENST00000478582 GOLT1BQ9Y3E0 138 aa19.39■□□□□ 0.69
CCM2-211ENST00000478582 INSP01308 110 aa19.38■□□□□ 0.69
CCM2-211ENST00000478582 MIFP14174 115 aa19.38■□□□□ 0.69
CCM2-211ENST00000478582 LEPP41159 167 aa19.38■□□□□ 0.69
CCM2-211ENST00000478582 TMEM78Q5T7P6 136 aa19.38■□□□□ 0.69
CCM2-211ENST00000478582 SFT2D1Q8WV19 159 aa19.38■□□□□ 0.69
CCM2-211ENST00000478582 H2AFB1P0C5Y9 115 aa19.37■□□□□ 0.69
CCM2-211ENST00000478582 SUMO1P63165 101 aaKnown RBP19.37■□□□□ 0.69
CCM2-211ENST00000478582 Q8NAQ8 132 aa19.37■□□□□ 0.69
CCM2-211ENST00000478582 C5orf17Q8NAS9 161 aa19.37■□□□□ 0.69
CCM2-211ENST00000478582 C11orf68Q9H3H3 251 aaKnown RBP19.37■□□□□ 0.69
CCM2-211ENST00000478582 ZNF492Q9P255 531 aa19.37■□□□□ 0.69
CCM2-211ENST00000478582 TRAV12-2A0A075B6T6 113 aa19.36■□□□□ 0.69
CCM2-211ENST00000478582 TRBV7-9A0A0J9YWB2 115 aa19.36■□□□□ 0.69
CCM2-211ENST00000478582 A0A0J9YWU9 116 aa19.36■□□□□ 0.69
CCM2-211ENST00000478582 SMIM9A6NGZ8 99 aa19.36■□□□□ 0.69
CCM2-211ENST00000478582 GGTLC3B5MD39 225 aa19.36■□□□□ 0.69
CCM2-211ENST00000478582 NKX6-2Q9C056 277 aaPredicted RBP19.36■□□□□ 0.69
CCM2-211ENST00000478582 NMBP08949 121 aa19.35■□□□□ 0.69
CCM2-211ENST00000478582 CRISP2P16562 243 aa19.35■□□□□ 0.69
CCM2-211ENST00000478582 ZNF138P52744 262 aa19.35■□□□□ 0.69
CCM2-211ENST00000478582 C20orf144Q9BQM9 153 aa19.35■□□□□ 0.69
CCM2-211ENST00000478582 YTHDF2Q9Y5A9 579 aaKnown RBP19.35■□□□□ 0.69
CCM2-211ENST00000478582 TRAV1-1A0A0B4J248 108 aa19.34■□□□□ 0.69
CCM2-211ENST00000478582 SERTM2A0A1B0GWG4 89 aa19.34■□□□□ 0.69
CCM2-211ENST00000478582 FAM74A7A6NL05 159 aa19.34■□□□□ 0.69
CCM2-211ENST00000478582 EPDR1Q9UM22 224 aa19.34■□□□□ 0.69
CCM2-211ENST00000478582 ARL2-SNX15V9GYD0 113 aa19.34■□□□□ 0.69
CCM2-211ENST00000478582 IGHV4-28A0A0C4DH34 117 aa19.33■□□□□ 0.68
CCM2-211ENST00000478582 KLLNB2CW77 178 aa19.33■□□□□ 0.68
CCM2-211ENST00000478582 TCRAP04437 139 aa19.33■□□□□ 0.68
CCM2-211ENST00000478582 KIR3DS1Q14943 382 aa19.33■□□□□ 0.68
CCM2-211ENST00000478582 GOLT1AQ6ZVE7 132 aa19.33■□□□□ 0.68
CCM2-211ENST00000478582 TMEM256Q8N2U0 113 aa19.33■□□□□ 0.68
CCM2-211ENST00000478582 BOLA1Q9Y3E2 137 aa19.33■□□□□ 0.68
CCM2-211ENST00000478582 LENEPQ9Y5L5 61 aa19.33■□□□□ 0.68
CCM2-211ENST00000478582 IGHV3OR16-12A0A075B7B8 117 aa19.32■□□□□ 0.68
CCM2-211ENST00000478582 RBMY1A1P0DJD3 496 aaKnown RBP19.32■□□□□ 0.68
CCM2-211ENST00000478582 RBMY1CP0DJD4 496 aa19.32■□□□□ 0.68
CCM2-211ENST00000478582 UBE2G2P60604 165 aa19.32■□□□□ 0.68
CCM2-211ENST00000478582 GNG5P63218 68 aa19.32■□□□□ 0.68
CCM2-211ENST00000478582 RBMY1FQ15415 496 aaKnown RBP19.32■□□□□ 0.68
CCM2-211ENST00000478582 GFI1BQ5VTD9 330 aa19.32■□□□□ 0.68
CCM2-211ENST00000478582 TMEM208Q9BTX3 173 aa19.32■□□□□ 0.68
CCM2-211ENST00000478582 RPH3ALQ9UNE2 315 aa19.32■□□□□ 0.68
CCM2-211ENST00000478582 PPT1P50897 306 aa19.3■□□□□ 0.68
CCM2-211ENST00000478582 ZFAND2AQ8N6M9 145 aa19.3■□□□□ 0.68
CCM2-211ENST00000478582 RYR3Q15413 4870 aa19.3■□□□□ 0.68
CCM2-211ENST00000478582 HBE1P02100 147 aa19.29■□□□□ 0.68
CCM2-211ENST00000478582 CCDC28AQ8IWP9 274 aa19.29■□□□□ 0.68
CCM2-211ENST00000478582 Q8TAT8 98 aa19.29■□□□□ 0.68
CCM2-211ENST00000478582 ATG101Q9BSB4 218 aa19.29■□□□□ 0.68
CCM2-211ENST00000478582 CSMD3Q7Z407 3707 aa19.28■□□□□ 0.68
CCM2-211ENST00000478582 TEX46H3BTG2 121 aa19.28■□□□□ 0.68
CCM2-211ENST00000478582 K7EQM0 130 aa19.28■□□□□ 0.68
CCM2-211ENST00000478582 LINC01587Q99440 93 aa19.28■□□□□ 0.68
CCM2-211ENST00000478582 TCEAL7Q9BRU2 100 aa19.28■□□□□ 0.68
CCM2-211ENST00000478582 A0A1B0GV50 99 aa19.27■□□□□ 0.68
CCM2-211ENST00000478582 C7orf71A4D174 169 aa19.27■□□□□ 0.68
CCM2-211ENST00000478582 H7BYZ3 331 aa19.27■□□□□ 0.68
CCM2-211ENST00000478582 J3KRW8 73 aa19.27■□□□□ 0.68
CCM2-211ENST00000478582 DEFB4AO15263 64 aa19.27■□□□□ 0.68
CCM2-211ENST00000478582 IFNA7P01567 189 aa19.27■□□□□ 0.68
CCM2-211ENST00000478582 GPX1P07203 203 aa19.27■□□□□ 0.68
CCM2-211ENST00000478582 RRN3P1Q2M238 152 aa19.27■□□□□ 0.68
CCM2-211ENST00000478582 ALKAL2Q6UX46 152 aa19.27■□□□□ 0.68
CCM2-211ENST00000478582 CYB561D1Q8N8Q1 229 aa19.27■□□□□ 0.68
CCM2-211ENST00000478582 STARD9Q9P2P6 4700 aa19.27■□□□□ 0.68
CCM2-211ENST00000478582 TRAV8-1A0A0A6YYK1 113 aa19.26■□□□□ 0.67
CCM2-211ENST00000478582 TMEM189A5PLL7 270 aa19.26■□□□□ 0.67
CCM2-211ENST00000478582 FBLL1A6NHQ2 334 aaKnown RBP19.26■□□□□ 0.67
CCM2-211ENST00000478582 PAGE4O60829 102 aa19.26■□□□□ 0.67
CCM2-211ENST00000478582 TAS2R60P59551 318 aa19.26■□□□□ 0.67
CCM2-211ENST00000478582 HIST1H2BAQ96A08 127 aa19.26■□□□□ 0.67
CCM2-211ENST00000478582 TRAV12-3A0A0B4J271 114 aa19.25■□□□□ 0.67
CCM2-211ENST00000478582 ZNF324O75467 553 aaPredicted RBP19.25■□□□□ 0.67
CCM2-211ENST00000478582 RNASE4P34096 147 aaKnown RBP19.25■□□□□ 0.67
CCM2-211ENST00000478582 CCL20P78556 96 aa19.25■□□□□ 0.67
CCM2-211ENST00000478582 CST9LP1Q5W188 147 aa19.25■□□□□ 0.67
CCM2-211ENST00000478582 TMEM75Q8N9X5 138 aa19.25■□□□□ 0.67
CCM2-211ENST00000478582 NIPSNAP3BQ9BS92 247 aa19.25■□□□□ 0.67
CCM2-211ENST00000478582 DYNC2H1Q8NCM8 4307 aaKnown RBP19.25■□□□□ 0.67
CCM2-211ENST00000478582 TENM2Q9NT68 2774 aa19.24■□□□□ 0.67
CCM2-211ENST00000478582 LCE6AA0A183 80 aa19.24■□□□□ 0.67
CCM2-211ENST00000478582 IGLV2-11P01706 119 aa19.24■□□□□ 0.67
CCM2-211ENST00000478582 BTN1A1Q13410 526 aa19.24■□□□□ 0.67
CCM2-211ENST00000478582 PMS2P11Q13670 270 aa19.24■□□□□ 0.67
CCM2-211ENST00000478582 PRR9Q5T870 116 aa19.24■□□□□ 0.67
CCM2-211ENST00000478582 ZNF705GA8MUZ8 300 aaPredicted RBP19.23■□□□□ 0.67
CCM2-211ENST00000478582 PEX7O00628 323 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms