RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 OR13C6PQ8NH95 151 aa11.27□□□□□ -0.61
NPHP4-208ENST00000478423 MRPL27Q9P0M9 148 aaKnown RBP11.27□□□□□ -0.61
NPHP4-208ENST00000478423 LSM4Q9Y4Z0 139 aaKnown RBP11.27□□□□□ -0.61
NPHP4-208ENST00000478423 H3BRN7 92 aa11.27□□□□□ -0.61
NPHP4-208ENST00000478423 C8orf86Q6ZUL3 223 aa11.27□□□□□ -0.61
NPHP4-208ENST00000478423 TMEM75Q8N9X5 138 aa11.27□□□□□ -0.61
NPHP4-208ENST00000478423 FXYD5Q96DB9 178 aa11.27□□□□□ -0.61
NPHP4-208ENST00000478423 ZNF492Q9P255 531 aa11.27□□□□□ -0.61
NPHP4-208ENST00000478423 TRGV1A0A0A0MS02 117 aa11.27□□□□□ -0.61
NPHP4-208ENST00000478423 RPL35AP18077 110 aaKnown RBP11.27□□□□□ -0.61
NPHP4-208ENST00000478423 CMC4P56277 68 aaPredicted RBP11.27□□□□□ -0.61
NPHP4-208ENST00000478423 C11orf52Q96A22 123 aa11.27□□□□□ -0.61
NPHP4-208ENST00000478423 TMEM213A2RRL7 107 aa11.26□□□□□ -0.61
NPHP4-208ENST00000478423 CD28P10747 220 aa11.26□□□□□ -0.61
NPHP4-208ENST00000478423 C8orf49Q96NF6 230 aa11.26□□□□□ -0.61
NPHP4-208ENST00000478423 ALKBH7Q9BT30 221 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-208ENST00000478423 CD300EQ496F6 205 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-208ENST00000478423 PRR25Q96S07 402 aa11.26□□□□□ -0.61
NPHP4-208ENST00000478423 GFRA4Q9GZZ7 299 aa11.26□□□□□ -0.61
NPHP4-208ENST00000478423 TMEM14CQ9P0S9 112 aa11.26□□□□□ -0.61
NPHP4-208ENST00000478423 FAM231BA6NCW3 169 aa11.25□□□□□ -0.61
NPHP4-208ENST00000478423 J3QLI3 93 aa11.25□□□□□ -0.61
NPHP4-208ENST00000478423 IGKCP01834 107 aa11.25□□□□□ -0.61
NPHP4-208ENST00000478423 HOXB4P17483 251 aaPredicted RBP11.25□□□□□ -0.61
NPHP4-208ENST00000478423 LYPD6BQ8NI32 183 aa11.25□□□□□ -0.61
NPHP4-208ENST00000478423 CHTOPQ9Y3Y2 248 aaKnown RBP11.25□□□□□ -0.61
NPHP4-208ENST00000478423 A0A087WWL8 130 aa11.25□□□□□ -0.61
NPHP4-208ENST00000478423 NDUFA4O00483 81 aa11.25□□□□□ -0.61
NPHP4-208ENST00000478423 ZNF415Q09FC8 603 aa11.25□□□□□ -0.61
NPHP4-208ENST00000478423 VWC2Q2TAL6 325 aa11.25□□□□□ -0.61
NPHP4-208ENST00000478423 CHCHD5Q9BSY4 110 aa11.25□□□□□ -0.61
NPHP4-208ENST00000478423 V9GYV3 84 aa11.25□□□□□ -0.61
NPHP4-208ENST00000478423 LRRK2Q5S007 2527 aa11.25□□□□□ -0.61
NPHP4-208ENST00000478423 SPINK13Q1W4C9 94 aa11.25□□□□□ -0.61
NPHP4-208ENST00000478423 CT83Q5H943 113 aa11.25□□□□□ -0.61
NPHP4-208ENST00000478423 CENPVL3A0A0U1RRI6 287 aa11.24□□□□□ -0.61
NPHP4-208ENST00000478423 IGHV3-53P01767 116 aa11.24□□□□□ -0.61
NPHP4-208ENST00000478423 IGHV4-39P01824 125 aa11.24□□□□□ -0.61
NPHP4-208ENST00000478423 DSCAMO60469 2012 aa11.24□□□□□ -0.61
NPHP4-208ENST00000478423 MCRIP2Q9BUT9 160 aaKnown RBP11.24□□□□□ -0.61
NPHP4-208ENST00000478423 NHP2Q9NX24 153 aaKnown RBP11.24□□□□□ -0.61
NPHP4-208ENST00000478423 ALPK3Q96L96 1907 aa11.24□□□□□ -0.61
NPHP4-208ENST00000478423 IGHV4-30-2A0A087WSY4 118 aa11.24□□□□□ -0.61
NPHP4-208ENST00000478423 RIPPLY3P57055 190 aa11.24□□□□□ -0.61
NPHP4-208ENST00000478423 ASPHD1Q5U4P2 390 aa11.24□□□□□ -0.61
NPHP4-208ENST00000478423 RITA1Q96K30 269 aa11.24□□□□□ -0.61
NPHP4-208ENST00000478423 NCKAP5O14513 1909 aa11.24□□□□□ -0.61
NPHP4-208ENST00000478423 TCTEX1D4Q5JR98 221 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 FAM231DQ6ZW35 169 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 C18orf32Q8TCD1 76 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 TMEM158Q8WZ71 300 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 CEP192Q8TEP8 1941 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 IGHV4-59P01825 116 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 LINC01549A6NIU2 74 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 VCYO14598 125 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 TYMSP04818 313 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 GUSBP1Q15486 140 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 DEFB112Q30KQ8 113 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 FBXL19-AS1Q494R0 122 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 C5orf30Q96GV9 206 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 C17orf77Q96MU5 243 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 CSTL1Q9H114 145 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 SYS1-DBNDD2H3BUS1 97 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 MS4A6AQ9H2W1 248 aa11.23□□□□□ -0.61
NPHP4-208ENST00000478423 FASNP49327 2511 aaKnown RBP11.22□□□□□ -0.61
NPHP4-208ENST00000478423 INSP01308 110 aa11.22□□□□□ -0.61
NPHP4-208ENST00000478423 RPL36AP83881 106 aaKnown RBP11.22□□□□□ -0.61
NPHP4-208ENST00000478423 Q0VG73 95 aa11.22□□□□□ -0.61
NPHP4-208ENST00000478423 DMRTA1Q5VZB9 504 aa11.22□□□□□ -0.61
NPHP4-208ENST00000478423 SFTA2Q6UW10 78 aa11.22□□□□□ -0.61
NPHP4-208ENST00000478423 C22orf34Q6ZV56 151 aa11.22□□□□□ -0.61
NPHP4-208ENST00000478423 RPL36ALQ969Q0 106 aaKnown RBP11.22□□□□□ -0.61
NPHP4-208ENST00000478423 PLA2G2EQ9NZK7 142 aa11.22□□□□□ -0.61
NPHP4-208ENST00000478423 MUC22E2RYF6 1773 aaPredicted RBP11.22□□□□□ -0.61
NPHP4-208ENST00000478423 hDV102S1A0JD36 115 aa11.22□□□□□ -0.61
NPHP4-208ENST00000478423 ZNF815PA8K554 130 aa11.22□□□□□ -0.61
NPHP4-208ENST00000478423 IGLV1-47P01700 117 aa11.22□□□□□ -0.61
NPHP4-208ENST00000478423 IGLV2-14P01704 120 aa11.22□□□□□ -0.61
NPHP4-208ENST00000478423 SMPXQ9UHP9 88 aa11.22□□□□□ -0.61
NPHP4-208ENST00000478423 A8MWP6 167 aa11.22□□□□□ -0.61
NPHP4-208ENST00000478423 IGKV1-17P01599 117 aa11.22□□□□□ -0.61
NPHP4-208ENST00000478423 OR2K2Q8NGT1 345 aa11.22□□□□□ -0.61
NPHP4-208ENST00000478423 XCL2Q9UBD3 114 aa11.22□□□□□ -0.61
NPHP4-208ENST00000478423 RNASE1P07998 156 aaKnown RBP11.21□□□□□ -0.61
NPHP4-208ENST00000478423 LINC01559Q495D7 138 aa11.21□□□□□ -0.61
NPHP4-208ENST00000478423 NRGNQ92686 78 aa11.21□□□□□ -0.61
NPHP4-208ENST00000478423 IGHV3-64A0A075B6Q5 118 aa11.21□□□□□ -0.61
NPHP4-208ENST00000478423 IGHV7-81A0A0B4J1V7 117 aa11.21□□□□□ -0.61
NPHP4-208ENST00000478423 H3BUT2 72 aa11.21□□□□□ -0.61
NPHP4-208ENST00000478423 C1QTNF4Q9BXJ3 329 aa11.21□□□□□ -0.61
NPHP4-208ENST00000478423 RNF114Q9Y508 228 aa11.21□□□□□ -0.61
NPHP4-208ENST00000478423 HOXA3O43365 443 aaPredicted RBP11.21□□□□□ -0.62
NPHP4-208ENST00000478423 TNFRSF6BO95407 300 aa11.21□□□□□ -0.62
NPHP4-208ENST00000478423 LINC00469Q8N7U9 141 aa11.21□□□□□ -0.62
NPHP4-208ENST00000478423 PRRC2CQ9Y520 2896 aaKnown RBP11.21□□□□□ -0.62
NPHP4-208ENST00000478423 A0A0U1RRA0 63 aa11.21□□□□□ -0.62
NPHP4-208ENST00000478423 SLAQ13239 276 aa11.21□□□□□ -0.62
NPHP4-208ENST00000478423 FAM104BQ5XKR9 115 aa11.21□□□□□ -0.62
NPHP4-208ENST00000478423 Q71RC1 249 aaPredicted RBP11.21□□□□□ -0.62
NPHP4-208ENST00000478423 VGLL1Q99990 258 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 256.7 ms