RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ORM1P02763 201 aa13.49□□□□□ -0.25
PDLIM1-202ENST00000477757 IQCF2Q8IXL9 164 aa13.49□□□□□ -0.25
PDLIM1-202ENST00000477757 DIRAS2Q96HU8 199 aa13.49□□□□□ -0.25
PDLIM1-202ENST00000477757 CCDC59Q9P031 241 aaKnown RBP13.49□□□□□ -0.25
PDLIM1-202ENST00000477757 AGPAT2O15120 278 aa13.48□□□□□ -0.25
PDLIM1-202ENST00000477757 ZNF253O75346 499 aa13.48□□□□□ -0.25
PDLIM1-202ENST00000477757 CRISP2P16562 243 aa13.48□□□□□ -0.25
PDLIM1-202ENST00000477757 RNASE4P34096 147 aaKnown RBP13.48□□□□□ -0.25
PDLIM1-202ENST00000477757 KRTAP10-4P60372 401 aaPredicted RBP13.48□□□□□ -0.25
PDLIM1-202ENST00000477757 ZNF415Q09FC8 603 aa13.48□□□□□ -0.25
PDLIM1-202ENST00000477757 ERCC8Q13216 396 aa13.48□□□□□ -0.25
PDLIM1-202ENST00000477757 TMEM14EPQ6UXP3 125 aa13.48□□□□□ -0.25
PDLIM1-202ENST00000477757 TXNDC17Q9BRA2 123 aa13.48□□□□□ -0.25
PDLIM1-202ENST00000477757 M0R3E3 92 aa13.47□□□□□ -0.25
PDLIM1-202ENST00000477757 RGS13O14921 159 aa13.47□□□□□ -0.25
PDLIM1-202ENST00000477757 SSSCA1O60232 199 aa13.47□□□□□ -0.25
PDLIM1-202ENST00000477757 SFT2D2O95562 160 aa13.47□□□□□ -0.25
PDLIM1-202ENST00000477757 METTL15P1P0C7V9 234 aa13.47□□□□□ -0.25
PDLIM1-202ENST00000477757 PPP1R1AQ13522 171 aa13.47□□□□□ -0.25
PDLIM1-202ENST00000477757 LINC01556Q5JQF7 62 aa13.47□□□□□ -0.25
PDLIM1-202ENST00000477757 C10orf113Q5VZT2 155 aa13.47□□□□□ -0.25
PDLIM1-202ENST00000477757 IGHV1OR15-1A0A075B7D0 117 aa13.46□□□□□ -0.25
PDLIM1-202ENST00000477757 IGHV3-38A0A0C4DH36 116 aa13.46□□□□□ -0.25
PDLIM1-202ENST00000477757 IBA57-AS1B1ANH7 110 aa13.46□□□□□ -0.25
PDLIM1-202ENST00000477757 SFTA3P0C7M3 94 aa13.46□□□□□ -0.25
PDLIM1-202ENST00000477757 OR10P1Q8NGE3 313 aa13.46□□□□□ -0.25
PDLIM1-202ENST00000477757 SMIM8Q96KF7 97 aa13.46□□□□□ -0.25
PDLIM1-202ENST00000477757 LINC00477Q96M19 166 aa13.46□□□□□ -0.25
PDLIM1-202ENST00000477757 ARPC5LQ9BPX5 153 aa13.46□□□□□ -0.25
PDLIM1-202ENST00000477757 RSL24D1Q9UHA3 163 aaKnown RBP13.46□□□□□ -0.25
PDLIM1-202ENST00000477757 GPX1P07203 203 aa13.45□□□□□ -0.26
PDLIM1-202ENST00000477757 NMBP08949 121 aa13.45□□□□□ -0.26
PDLIM1-202ENST00000477757 TIRAPP58753 221 aa13.45□□□□□ -0.26
PDLIM1-202ENST00000477757 PRR9Q5T870 116 aa13.45□□□□□ -0.26
PDLIM1-202ENST00000477757 OR10G4Q8NGN3 311 aa13.45□□□□□ -0.26
PDLIM1-202ENST00000477757 ZNF479Q96JC4 524 aa13.45□□□□□ -0.26
PDLIM1-202ENST00000477757 AGPAT4-IT1Q9H0P7 198 aa13.45□□□□□ -0.26
PDLIM1-202ENST00000477757 Q9HAA7 133 aa13.45□□□□□ -0.26
PDLIM1-202ENST00000477757 RNF213Q63HN8 5207 aa13.45□□□□□ -0.26
PDLIM1-202ENST00000477757 PKHD1L1Q86WI1 4243 aa13.44□□□□□ -0.26
PDLIM1-202ENST00000477757 C9JCJ5 164 aa13.44□□□□□ -0.26
PDLIM1-202ENST00000477757 FAUP35544 74 aaKnown RBP13.44□□□□□ -0.26
PDLIM1-202ENST00000477757 ZFAND2AQ8N6M9 145 aa13.44□□□□□ -0.26
PDLIM1-202ENST00000477757 MGST2Q99735 147 aa13.44□□□□□ -0.26
PDLIM1-202ENST00000477757 Q6ZQT7 251 aa13.43□□□□□ -0.26
PDLIM1-202ENST00000477757 SCXQ7RTU7 201 aa13.43□□□□□ -0.26
PDLIM1-202ENST00000477757 TRBV19A0A075B6N1 114 aa13.42□□□□□ -0.26
PDLIM1-202ENST00000477757 WFDC2Q14508 124 aa13.42□□□□□ -0.26
PDLIM1-202ENST00000477757 C9orf47Q6ZRZ4 202 aa13.42□□□□□ -0.26
PDLIM1-202ENST00000477757 SH2D6Q7Z4S9 175 aa13.42□□□□□ -0.26
PDLIM1-202ENST00000477757 BLNKQ8WV28 456 aa13.42□□□□□ -0.26
PDLIM1-202ENST00000477757 GGACTQ9BVM4 153 aa13.42□□□□□ -0.26
PDLIM1-202ENST00000477757 DNAJC4Q9NNZ3 241 aa13.42□□□□□ -0.26
PDLIM1-202ENST00000477757 PRELID1Q9Y255 219 aa13.42□□□□□ -0.26
PDLIM1-202ENST00000477757 SLC25A21Q9BQT8 299 aaPredicted RBP13.41□□□□□ -0.26
PDLIM1-202ENST00000477757 TSC22D2O75157 780 aa13.4□□□□□ -0.26
PDLIM1-202ENST00000477757 NDUFB4O95168 129 aa13.4□□□□□ -0.26
PDLIM1-202ENST00000477757 PPT1P50897 306 aa13.4□□□□□ -0.26
PDLIM1-202ENST00000477757 ARL16Q0P5N6 197 aa13.4□□□□□ -0.26
PDLIM1-202ENST00000477757 SPCS2Q15005 226 aa13.4□□□□□ -0.26
PDLIM1-202ENST00000477757 RASL10AQ92737 203 aa13.4□□□□□ -0.26
PDLIM1-202ENST00000477757 TRIM63Q969Q1 353 aa13.4□□□□□ -0.26
PDLIM1-202ENST00000477757 SRRQ9GZT4 340 aa13.4□□□□□ -0.26
PDLIM1-202ENST00000477757 SLC25A31Q9H0C2 315 aa13.4□□□□□ -0.26
PDLIM1-202ENST00000477757 TAS2R30P59541 319 aa13.39□□□□□ -0.27
PDLIM1-202ENST00000477757 TMEM78Q5T7P6 136 aa13.39□□□□□ -0.27
PDLIM1-202ENST00000477757 MCFD2Q8NI22 146 aa13.39□□□□□ -0.27
PDLIM1-202ENST00000477757 RAB2BQ8WUD1 216 aa13.39□□□□□ -0.27
PDLIM1-202ENST00000477757 SOSTQ9BQB4 213 aa13.39□□□□□ -0.27
PDLIM1-202ENST00000477757 BOLA1Q9Y3E2 137 aa13.39□□□□□ -0.27
PDLIM1-202ENST00000477757 IGKV2-40A0A087WW87 121 aaPredicted RBP13.38□□□□□ -0.27
PDLIM1-202ENST00000477757 LOC100131303A0A0U1RQF7 123 aa13.38□□□□□ -0.27
PDLIM1-202ENST00000477757 IGKV2D-40P01614 121 aaPredicted RBP13.38□□□□□ -0.27
PDLIM1-202ENST00000477757 CAMLGP49069 296 aa13.38□□□□□ -0.27
PDLIM1-202ENST00000477757 AP3S2P59780 193 aa13.38□□□□□ -0.27
PDLIM1-202ENST00000477757 PDE6HQ13956 83 aa13.38□□□□□ -0.27
PDLIM1-202ENST00000477757 LAGE3Q14657 143 aa13.38□□□□□ -0.27
PDLIM1-202ENST00000477757 Q6ZRG5 221 aa13.38□□□□□ -0.27
PDLIM1-202ENST00000477757 OR1L4Q8NGR5 311 aa13.38□□□□□ -0.27
PDLIM1-202ENST00000477757 HIST1H1EP10412 219 aaKnown RBP13.37□□□□□ -0.27
PDLIM1-202ENST00000477757 UBE2MP61081 183 aaKnown RBP13.37□□□□□ -0.27
PDLIM1-202ENST00000477757 ZNF846Q147U1 533 aa13.37□□□□□ -0.27
PDLIM1-202ENST00000477757 NHLRC2Q8NBF2 726 aa13.37□□□□□ -0.27
PDLIM1-202ENST00000477757 PFDN5Q99471 154 aa13.37□□□□□ -0.27
PDLIM1-202ENST00000477757 TM2D2Q9BX73 214 aa13.37□□□□□ -0.27
PDLIM1-202ENST00000477757 TMEM14CQ9P0S9 112 aa13.37□□□□□ -0.27
PDLIM1-202ENST00000477757 ZNF492Q9P255 531 aa13.37□□□□□ -0.27
PDLIM1-202ENST00000477757 TRAV8-6A0A0B4J262 113 aa13.36□□□□□ -0.27
PDLIM1-202ENST00000477757 TRAV4A0A0B4J268 109 aa13.36□□□□□ -0.27
PDLIM1-202ENST00000477757 MIC13Q5XKP0 118 aa13.36□□□□□ -0.27
PDLIM1-202ENST00000477757 EXOC3-AS1Q8N2X6 119 aa13.36□□□□□ -0.27
PDLIM1-202ENST00000477757 SPXQ9BT56 116 aa13.36□□□□□ -0.27
PDLIM1-202ENST00000477757 CHAC1Q9BUX1 264 aa13.36□□□□□ -0.27
PDLIM1-202ENST00000477757 TIMM9Q9Y5J7 89 aa13.36□□□□□ -0.27
PDLIM1-202ENST00000477757 LRP2P98164 4655 aa13.36□□□□□ -0.27
PDLIM1-202ENST00000477757 SCGB1D2O95969 90 aa13.35□□□□□ -0.27
PDLIM1-202ENST00000477757 SMIM18P0DKX4 95 aa13.35□□□□□ -0.27
PDLIM1-202ENST00000477757 RAB31Q13636 194 aa13.35□□□□□ -0.27
PDLIM1-202ENST00000477757 TDRG1Q3Y452 100 aa13.35□□□□□ -0.27
PDLIM1-202ENST00000477757 NRARPQ7Z6K4 114 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms