RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 GPR132Q9UNW8 380 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 IGKV3D-20A0A0C4DH25 116 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 A0A0J9YY99 117 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 CRYM-AS1A6NIL9 109 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 ZNF98A6NK75 572 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 PRSS46E5RG02 174 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 GATCO43716 136 aaKnown RBP3.1□□□□□ -1.91
CKS1B-207ENST00000477676 STAG3L2P0CL84 134 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 RAB4AP20338 218 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 RAB4BP61018 213 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 RNASE10Q5GAN6 216 aaKnown RBP3.1□□□□□ -1.91
CKS1B-207ENST00000477676 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 EBLN2Q6P2I7 272 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 LYZL2Q7Z4W2 148 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 CROCCP3Q8IVE0 287 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 OR8I2Q8N0Y5 310 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.1□□□□□ -1.91
CKS1B-207ENST00000477676 THAP8Q8NA92 274 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 LRRC20Q8TCA0 184 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 RNASE8Q8TDE3 154 aaKnown RBP3.1□□□□□ -1.91
CKS1B-207ENST00000477676 RXFP4Q8TDU9 374 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 RBPMSQ93062 196 aaKnown RBP3.1□□□□□ -1.91
CKS1B-207ENST00000477676 VSIG2Q96IQ7 327 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 TMEM208Q9BTX3 173 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 PARD6GQ9BYG4 376 aaPredicted RBP3.1□□□□□ -1.91
CKS1B-207ENST00000477676 MIXL1Q9H2W2 232 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 NAA60Q9H7X0 242 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 NOP10Q9NPE3 64 aaKnown RBP3.1□□□□□ -1.91
CKS1B-207ENST00000477676 RPRMQ9NS64 109 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 MRPS16Q9Y3D3 137 aaKnown RBP3.1□□□□□ -1.91
CKS1B-207ENST00000477676 TMEM56-RWDD3S4R434 201 aa3.1□□□□□ -1.91
CKS1B-207ENST00000477676 A0A096LPF7 62 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 ZFP92A6NM28 416 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 MRPS12O15235 138 aaKnown RBP3.09□□□□□ -1.91
CKS1B-207ENST00000477676 PITX3O75364 302 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 ATG12O94817 140 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 RAB3DO95716 219 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 INSP01308 110 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 PRSS1P07477 247 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 SULT1A3P0DMM9 295 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 SULT1A4P0DMN0 295 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 M6PRP20645 277 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 GPX4P36969 197 aaPredicted RBP3.09□□□□□ -1.91
CKS1B-207ENST00000477676 OR5I1Q13606 314 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 CLINT1Q14677 625 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 SCGB2B2Q4G0G5 96 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 PAPPA-AS1Q5QFB9 102 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 STEAP1BQ6NZ63 245 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 GPR141Q7Z602 305 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 SLC51BQ86UW2 128 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 LGI3Q8N145 548 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 CCDC71LQ8N9Z2 235 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 TMEM229BQ8NBD8 167 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 OR4C16Q8NGL9 310 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 RNASE11Q8TAA1 199 aaKnown RBP3.09□□□□□ -1.91
CKS1B-207ENST00000477676 ZFAND1Q8TCF1 268 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 DTD1Q8TEA8 209 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 C18orf15Q96N68 181 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 LINC01587Q99440 93 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 TRGV9Q99603 122 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 NAA50Q9GZZ1 169 aaKnown RBP3.09□□□□□ -1.91
CKS1B-207ENST00000477676 SLC25A22Q9H936 323 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 U3KQ87 197 aa3.09□□□□□ -1.91
CKS1B-207ENST00000477676 RNF213Q63HN8 5207 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 A0A087WTM6 91 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 SNRPGP15A8MWD9 76 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 H3BRN7 92 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 K7EQM0 130 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 DUSP14O95147 198 aaKnown RBP3.08□□□□□ -1.92
CKS1B-207ENST00000477676 ATP6V1G2O95670 118 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 IAPPP10997 89 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 HTN1P15515 57 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 CXCL3P19876 107 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 GALR1P47211 349 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 MEOX2P50222 304 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 TAS2R60P59551 318 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 PNRC1Q12796 327 aaPredicted RBP3.08□□□□□ -1.92
CKS1B-207ENST00000477676 NDUFA5Q16718 116 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 TTC32Q5I0X7 151 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 GPR107Q5VW38 600 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 PATE2Q6UY27 113 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 Q6ZTI0 123 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 ZNF680Q8NEM1 530 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 OR4C5Q8NGB2 326 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 OR8A1Q8NGG7 326 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 GNPNAT1Q96EK6 184 aaPredicted RBP3.08□□□□□ -1.92
CKS1B-207ENST00000477676 SLC35E1Q96K37 410 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 FUNDC2Q9BWH2 189 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 DNAJC4Q9NNZ3 241 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 BATF3Q9NR55 127 aa3.08□□□□□ -1.92
CKS1B-207ENST00000477676 TIMM8BQ9Y5J9 83 aaPredicted RBP3.08□□□□□ -1.92
CKS1B-207ENST00000477676 A0A0B4J2A0 478 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 SMIM31A0A1B0GVY4 71 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 FAM25AB3EWG3 89 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 FAM25CB3EWG5 89 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 FAM25GB3EWG6 89 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 CCNKO75909 580 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 SNRPCP09234 159 aaKnown RBP3.07□□□□□ -1.92
CKS1B-207ENST00000477676 ORM2P19652 201 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 TBPP20226 339 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms