RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 ZNF331Q9NQX6 463 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-208ENST00000476739 RPRMQ9NS64 109 aa7.06□□□□□ -1.28
HDAC3-208ENST00000476739 A0A087WWC5 75 aa7.05□□□□□ -1.28
HDAC3-208ENST00000476739 ZNF705FA8MVS1 300 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-208ENST00000476739 C17orf112F2Z3M2 114 aa7.05□□□□□ -1.28
HDAC3-208ENST00000476739 SFTA3P0C7M3 94 aa7.05□□□□□ -1.28
HDAC3-208ENST00000476739 FFAR4Q5NUL3 377 aa7.05□□□□□ -1.28
HDAC3-208ENST00000476739 AKR1C8PQ5T2L2 129 aa7.05□□□□□ -1.28
HDAC3-208ENST00000476739 MORN3Q6PF18 240 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-208ENST00000476739 OR11H2Q8NH07 326 aa7.05□□□□□ -1.28
HDAC3-208ENST00000476739 MUC7Q8TAX7 377 aa7.05□□□□□ -1.28
HDAC3-208ENST00000476739 ZNF503Q96F45 646 aa7.05□□□□□ -1.28
HDAC3-208ENST00000476739 RARRES2Q99969 163 aa7.05□□□□□ -1.28
HDAC3-208ENST00000476739 ACTR3CQ9C0K3 210 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-208ENST00000476739 SLC35B3Q9H1N7 401 aa7.05□□□□□ -1.28
HDAC3-208ENST00000476739 HRH4Q9H3N8 390 aa7.05□□□□□ -1.28
HDAC3-208ENST00000476739 XCL2Q9UBD3 114 aa7.05□□□□□ -1.28
HDAC3-208ENST00000476739 STARD9Q9P2P6 4700 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 A0A1W2PPQ1 181 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 C7orf77A4D0Y5 90 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 PRAC2D3DTV9 90 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 DEFB4AO15263 64 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 CIDEAO60543 219 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 NDUFB4O95168 129 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 CNN1P51911 297 aaKnown RBP7.04□□□□□ -1.28
HDAC3-208ENST00000476739 PSG3Q16557 428 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 ZFAND6Q6FIF0 208 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 EBLN2Q6P2I7 272 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 LCN15Q6UWW0 184 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 AMTNQ6UX39 209 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 ZNF738Q8NE65 137 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 SLC50A1Q9BRV3 221 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 KCNIP2Q9NS61 270 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 TMEM14CQ9P0S9 112 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 RNF24Q9Y225 148 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 FUT9Q9Y231 359 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 X6R8D5 127 aa7.04□□□□□ -1.28
HDAC3-208ENST00000476739 TRBV19A0A075B6N1 114 aa7.03□□□□□ -1.28
HDAC3-208ENST00000476739 A8MTW9 85 aa7.03□□□□□ -1.28
HDAC3-208ENST00000476739 B4DEV8 164 aa7.03□□□□□ -1.28
HDAC3-208ENST00000476739 DLEU1O43261 78 aa7.03□□□□□ -1.28
HDAC3-208ENST00000476739 OR10J4P0C629 311 aa7.03□□□□□ -1.28
HDAC3-208ENST00000476739 SULT1A2P50226 295 aa7.03□□□□□ -1.28
HDAC3-208ENST00000476739 PSG9Q00887 426 aa7.03□□□□□ -1.28
HDAC3-208ENST00000476739 JOSD1Q15040 202 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-208ENST00000476739 RPL7L1Q6DKI1 246 aaKnown RBP7.03□□□□□ -1.28
HDAC3-208ENST00000476739 EXOC3-AS1Q8N2X6 119 aa7.03□□□□□ -1.28
HDAC3-208ENST00000476739 LYPD6BQ8NI32 183 aa7.03□□□□□ -1.28
HDAC3-208ENST00000476739 BLNKQ8WV28 456 aa7.03□□□□□ -1.28
HDAC3-208ENST00000476739 RPUSD4Q96CM3 377 aaKnown RBP7.03□□□□□ -1.28
HDAC3-208ENST00000476739 FXYD5Q96DB9 178 aa7.03□□□□□ -1.28
HDAC3-208ENST00000476739 CLUHP3Q96NS8 147 aa7.03□□□□□ -1.28
HDAC3-208ENST00000476739 MRPL32Q9BYC8 188 aaKnown RBP7.03□□□□□ -1.28
HDAC3-208ENST00000476739 SH3BGRL3Q9H299 93 aa7.03□□□□□ -1.28
HDAC3-208ENST00000476739 TIMM9Q9Y5J7 89 aa7.03□□□□□ -1.28
HDAC3-208ENST00000476739 HSBP1L1C9JCN9 74 aa7.02□□□□□ -1.29
HDAC3-208ENST00000476739 C3orf84H3BNL1 204 aa7.02□□□□□ -1.29
HDAC3-208ENST00000476739 M0R3E3 92 aa7.02□□□□□ -1.29
HDAC3-208ENST00000476739 JTBO76095 146 aa7.02□□□□□ -1.29
HDAC3-208ENST00000476739 RBMY1A1P0DJD3 496 aaKnown RBP7.02□□□□□ -1.29
HDAC3-208ENST00000476739 RBMY1CP0DJD4 496 aa7.02□□□□□ -1.29
HDAC3-208ENST00000476739 HIST1H1EP10412 219 aaKnown RBP7.02□□□□□ -1.29
HDAC3-208ENST00000476739 ATP6V0CP27449 155 aa7.02□□□□□ -1.29
HDAC3-208ENST00000476739 HIST1H1AQ02539 215 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-208ENST00000476739 ZNF266Q14584 549 aa7.02□□□□□ -1.29
HDAC3-208ENST00000476739 RBMY1FQ15415 496 aaKnown RBP7.02□□□□□ -1.29
HDAC3-208ENST00000476739 TMEM41BQ5BJD5 291 aa7.02□□□□□ -1.29
HDAC3-208ENST00000476739 CASC10Q5T4H9 136 aa7.02□□□□□ -1.29
HDAC3-208ENST00000476739 SMIM15Q7Z3B0 74 aa7.02□□□□□ -1.29
HDAC3-208ENST00000476739 Q8NAQ8 132 aa7.02□□□□□ -1.29
HDAC3-208ENST00000476739 OR8A1Q8NGG7 326 aa7.02□□□□□ -1.29
HDAC3-208ENST00000476739 OR10D4PQ8NGN7 298 aa7.02□□□□□ -1.29
HDAC3-208ENST00000476739 PAXXQ9BUH6 204 aa7.02□□□□□ -1.29
HDAC3-208ENST00000476739 CSMD3Q7Z407 3707 aa7.02□□□□□ -1.29
HDAC3-208ENST00000476739 TRAV12-2A0A075B6T6 113 aa7.01□□□□□ -1.29
HDAC3-208ENST00000476739 IGHV4-28A0A0C4DH34 117 aa7.01□□□□□ -1.29
HDAC3-208ENST00000476739 M0R036 132 aa7.01□□□□□ -1.29
HDAC3-208ENST00000476739 M0R2Z0 102 aa7.01□□□□□ -1.29
HDAC3-208ENST00000476739 HMGB3O15347 200 aaKnown RBP7.01□□□□□ -1.29
HDAC3-208ENST00000476739 CRXO43186 299 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-208ENST00000476739 ZNF253O75346 499 aa7.01□□□□□ -1.29
HDAC3-208ENST00000476739 NDUFA6P56556 154 aa7.01□□□□□ -1.29
HDAC3-208ENST00000476739 GUK1Q16774 197 aa7.01□□□□□ -1.29
HDAC3-208ENST00000476739 SPINK13Q1W4C9 94 aa7.01□□□□□ -1.29
HDAC3-208ENST00000476739 ACOT6Q3I5F7 207 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-208ENST00000476739 C1orf158Q8N1D5 194 aa7.01□□□□□ -1.29
HDAC3-208ENST00000476739 IL17DQ8TAD2 202 aa7.01□□□□□ -1.29
HDAC3-208ENST00000476739 CYTL1Q9NRR1 136 aa7.01□□□□□ -1.29
HDAC3-208ENST00000476739 IGHV3OR16-12A0A075B7B8 117 aa7□□□□□ -1.29
HDAC3-208ENST00000476739 OR7C2O60412 319 aa7□□□□□ -1.29
HDAC3-208ENST00000476739 DUSP14O95147 198 aaKnown RBP7□□□□□ -1.29
HDAC3-208ENST00000476739 PRM2P04554 102 aa7□□□□□ -1.29
HDAC3-208ENST00000476739 NBEAP1P0C6P0 100 aa7□□□□□ -1.29
HDAC3-208ENST00000476739 RPS10P46783 165 aaKnown RBP7□□□□□ -1.29
HDAC3-208ENST00000476739 RHOBP62745 196 aa7□□□□□ -1.29
HDAC3-208ENST00000476739 RANP62826 216 aaKnown RBP7□□□□□ -1.29
HDAC3-208ENST00000476739 PDE6HQ13956 83 aa7□□□□□ -1.29
HDAC3-208ENST00000476739 ICAM4Q14773 271 aa7□□□□□ -1.29
HDAC3-208ENST00000476739 KIR3DS1Q14943 382 aa7□□□□□ -1.29
HDAC3-208ENST00000476739 ZNF705AQ6ZN79 300 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms