RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 C2orf82Q6UX34 121 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 PPP1R27Q86WC6 154 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 HARBI1Q96MB7 349 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 SPANXDQ9BXN6 97 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 Q9H3A6 140 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 ESM1Q9NQ30 184 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 TRBV20-1A0A075B6N2 111 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 A0A0G2JNJ9 132 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 D6R8Y8 96 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 CLEC3BP05452 202 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 SPINK8P0C7L1 97 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 SAA1P0DJI8 122 aaPredicted RBP3.12□□□□□ -1.91
USP16-205ENST00000474835 IFITM1P13164 125 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 HERV-K104P63124 156 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 AESQ08117 197 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 SPINK9Q5DT21 86 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 AAED1Q7RTV5 226 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 PLXDC1Q8IUK5 500 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 VKORC1L1Q8N0U8 176 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 Q9UFV3 132 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 MAP1AP78559 2803 aaPredicted RBP3.12□□□□□ -1.91
USP16-205ENST00000474835 IGHV4OR15-8A0A075B7B6 117 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 A0A087WW49 117 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 TRBV30A0A0K0K1B3 111 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 C17orf100A8MU93 164 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 M0R381 172 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 LGALS9O00182 355 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 IGKCP01834 107 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 CFIP05156 583 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 MED14OSP0DP75 135 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 IL11RAQ14626 422 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 PRAMEF5Q5TYX0 476 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 PRAMEF6Q5VXH4 476 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 SMCR5Q8TEV8 140 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 TTTY13Q9BZ97 58 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 CXXC4Q9H2H0 198 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 C11orf21Q9P2W6 132 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 TRRAPQ9Y4A5 3859 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 KNTC1P50748 2209 aa3.12□□□□□ -1.91
USP16-205ENST00000474835 PLNP26678 52 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 CSN1S1P47710 185 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 IGFL2Q6UWQ7 119 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 GFRALQ6UXV0 394 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 PDPNQ86YL7 162 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 PTH2Q96A98 100 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 PGLYRP4Q96LB8 373 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 SPXQ9BT56 116 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 CYSTM1Q9H1C7 97 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 F11RQ9Y624 299 aaKnown RBP3.11□□□□□ -1.91
USP16-205ENST00000474835 IGHV3OR15-7A0A075B7D8 119 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 TRAV26-2A0A0B4J265 109 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 C5orf49A4QMS7 147 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 K7EIM0 57 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 IGHV3-33P01772 117 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 EGR2P11161 476 aaPredicted RBP3.11□□□□□ -1.91
USP16-205ENST00000474835 TM4SF20Q53R12 229 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 MDP1Q86V88 176 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 ORMDL3Q8N138 153 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 KLRF1Q9NZS2 232 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 SS18L2Q9UHA2 77 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 F5P12259 2224 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 MUC4Q99102 2169 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 TMEM223A0PJW6 202 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 SPINK4O60575 86 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 DUSP14O95147 198 aaKnown RBP3.11□□□□□ -1.91
USP16-205ENST00000474835 IGHV1-2P23083 117 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 FOLR3P41439 243 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 EFNA4P52798 201 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 CRIP2P52943 208 aaPredicted RBP3.11□□□□□ -1.91
USP16-205ENST00000474835 C1orf61Q13536 156 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 C10orf113Q5VZT2 155 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 LINC00305Q7Z4B0 112 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 ANKRD29Q8N6D5 301 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 Q8N6K4 173 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 PLEKHB2Q96CS7 222 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 NAA38Q9BRA0 125 aaKnown RBP3.11□□□□□ -1.91
USP16-205ENST00000474835 MRPL20Q9BYC9 149 aaKnown RBP3.11□□□□□ -1.91
USP16-205ENST00000474835 C12orf49Q9H741 205 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 HIF1ANQ9NWT6 349 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 CALYQ9NYX4 217 aa3.11□□□□□ -1.91
USP16-205ENST00000474835 HRNRQ86YZ3 2850 aaPredicted RBP3.11□□□□□ -1.91
USP16-205ENST00000474835 TRAV25A0A0B4J276 109 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 FAM90A27PA6NNH2 459 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 HSPB6O14558 160 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 NDUFA3O95167 84 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 IGLV1-47P01700 117 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 CXCL5P42830 114 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 UBE2L3P68036 154 aaKnown RBP3.1□□□□□ -1.91
USP16-205ENST00000474835 ITLN2Q8WWU7 325 aaPredicted RBP3.1□□□□□ -1.91
USP16-205ENST00000474835 MRPL53Q96EL3 112 aaKnown RBP3.1□□□□□ -1.91
USP16-205ENST00000474835 LINC00526Q96FQ7 95 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 KIR2DL4Q99706 377 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 NXT2Q9NPJ8 142 aaKnown RBP3.1□□□□□ -1.91
USP16-205ENST00000474835 SPANXCQ9NY87 97 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 NACAE9PAV3 2078 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 PI4KAP42356 2102 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 ARHGAP32A7KAX9 2087 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 IGKV3D-20A0A0C4DH25 116 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 K7ESF4 209 aa3.1□□□□□ -1.91
USP16-205ENST00000474835 SOCS3O14543 225 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms