RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 ID1P41134 155 aa20.63■□□□□ 0.89
HOXB3-207ENST00000472863 LINC00322Q6ZN03 302 aaPredicted RBP20.63■□□□□ 0.89
HOXB3-207ENST00000472863 PRIMA1Q86XR5 153 aa20.63■□□□□ 0.89
HOXB3-207ENST00000472863 C8orf49Q96NF6 230 aa20.63■□□□□ 0.89
HOXB3-207ENST00000472863 AGPAT4-IT1Q9H0P7 198 aa20.63■□□□□ 0.89
HOXB3-207ENST00000472863 TUBA4BQ9H853 241 aa20.63■□□□□ 0.89
HOXB3-207ENST00000472863 URGCP-MRPS24S4R325 110 aa20.63■□□□□ 0.89
HOXB3-207ENST00000472863 RBAKDNA6NC62 111 aa20.63■□□□□ 0.89
HOXB3-207ENST00000472863 SORL1Q92673 2214 aa20.62■□□□□ 0.89
HOXB3-207ENST00000472863 CD300EQ496F6 205 aaPredicted RBP20.62■□□□□ 0.89
HOXB3-207ENST00000472863 RBPMS2Q6ZRY4 209 aaKnown RBP20.62■□□□□ 0.89
HOXB3-207ENST00000472863 CITED1Q99966 193 aa20.62■□□□□ 0.89
HOXB3-207ENST00000472863 F6UB75 175 aa20.61■□□□□ 0.89
HOXB3-207ENST00000472863 ZNF688P0C7X2 276 aa20.61■□□□□ 0.89
HOXB3-207ENST00000472863 SAMD13Q5VXD3 122 aa20.61■□□□□ 0.89
HOXB3-207ENST00000472863 PRR25Q96S07 402 aa20.61■□□□□ 0.89
HOXB3-207ENST00000472863 GPR61Q9BZJ8 451 aa20.61■□□□□ 0.89
HOXB3-207ENST00000472863 PAFAH1B2P68402 229 aa20.61■□□□□ 0.89
HOXB3-207ENST00000472863 IBA57Q5T440 356 aaKnown RBP20.61■□□□□ 0.89
HOXB3-207ENST00000472863 ZC2HC1AQ96GY0 325 aa20.61■□□□□ 0.89
HOXB3-207ENST00000472863 CXorf65A6NEN9 183 aa20.59■□□□□ 0.89
HOXB3-207ENST00000472863 PPP1R2P9O14990 202 aa20.59■□□□□ 0.89
HOXB3-207ENST00000472863 C9orf47Q6ZRZ4 202 aa20.59■□□□□ 0.89
HOXB3-207ENST00000472863 OSTCQ9NRP0 149 aa20.59■□□□□ 0.89
HOXB3-207ENST00000472863 SIGLEC8Q9NYZ4 499 aa20.59■□□□□ 0.89
HOXB3-207ENST00000472863 FBLL1A6NHQ2 334 aaKnown RBP20.59■□□□□ 0.89
HOXB3-207ENST00000472863 PSMG4Q5JS54 123 aa20.59■□□□□ 0.89
HOXB3-207ENST00000472863 C15orf54Q8N8G6 183 aa20.59■□□□□ 0.89
HOXB3-207ENST00000472863 NUDT10Q8NFP7 164 aa20.59■□□□□ 0.89
HOXB3-207ENST00000472863 NUDT11Q96G61 164 aa20.59■□□□□ 0.89
HOXB3-207ENST00000472863 V9GYV3 84 aa20.59■□□□□ 0.89
HOXB3-207ENST00000472863 COLCA2A8K830 154 aa20.58■□□□□ 0.88
HOXB3-207ENST00000472863 PF4P02776 101 aa20.58■□□□□ 0.88
HOXB3-207ENST00000472863 YPEL4Q96NS1 127 aa20.58■□□□□ 0.88
HOXB3-207ENST00000472863 FBN1P35555 2871 aaKnown RBP20.58■□□□□ 0.88
HOXB3-207ENST00000472863 IZUMO1RA6ND01 250 aa20.57■□□□□ 0.88
HOXB3-207ENST00000472863 SNRPD3P62318 126 aaKnown RBP20.57■□□□□ 0.88
HOXB3-207ENST00000472863 SAPCD1Q5SSQ6 148 aa20.57■□□□□ 0.88
HOXB3-207ENST00000472863 CRIP1P50238 77 aa20.57■□□□□ 0.88
HOXB3-207ENST00000472863 ELOBQ15370 118 aa20.57■□□□□ 0.88
HOXB3-207ENST00000472863 TMEM78Q5T7P6 136 aa20.57■□□□□ 0.88
HOXB3-207ENST00000472863 OR8A1Q8NGG7 326 aa20.57■□□□□ 0.88
HOXB3-207ENST00000472863 FAM231DQ6ZW35 169 aa20.56■□□□□ 0.88
HOXB3-207ENST00000472863 OR10J6PQ8NGY7 276 aa20.56■□□□□ 0.88
HOXB3-207ENST00000472863 SAP30O75446 220 aa20.55■□□□□ 0.88
HOXB3-207ENST00000472863 PFN1P07737 140 aaKnown RBP20.55■□□□□ 0.88
HOXB3-207ENST00000472863 ZNF138P52744 262 aa20.55■□□□□ 0.88
HOXB3-207ENST00000472863 LINC00482Q8N8I6 264 aa20.55■□□□□ 0.88
HOXB3-207ENST00000472863 ZNF492Q9P255 531 aa20.55■□□□□ 0.88
HOXB3-207ENST00000472863 C19orf71A6NCJ1 209 aa20.55■□□□□ 0.88
HOXB3-207ENST00000472863 HIST1H1AQ02539 215 aaPredicted RBP20.55■□□□□ 0.88
HOXB3-207ENST00000472863 ZNF705GA8MUZ8 300 aaPredicted RBP20.54■□□□□ 0.88
HOXB3-207ENST00000472863 CA1P00915 261 aaPredicted RBP20.54■□□□□ 0.88
HOXB3-207ENST00000472863 GDF5OSQ5U4N7 250 aa20.54■□□□□ 0.88
HOXB3-207ENST00000472863 BIN3Q9NQY0 253 aa20.54■□□□□ 0.88
HOXB3-207ENST00000472863 NPIPB6E9PJ23 425 aa20.53■□□□□ 0.88
HOXB3-207ENST00000472863 FAM3BP58499 235 aaPredicted RBP20.53■□□□□ 0.88
HOXB3-207ENST00000472863 TGIF2-C20orf24A0A0A6YYL0 155 aa20.53■□□□□ 0.88
HOXB3-207ENST00000472863 CT45A10P0DMU9 189 aa20.53■□□□□ 0.88
HOXB3-207ENST00000472863 CD33P20138 364 aa20.53■□□□□ 0.88
HOXB3-207ENST00000472863 COX8CQ7Z4L0 72 aa20.53■□□□□ 0.88
HOXB3-207ENST00000472863 LINC00477Q96M19 166 aa20.53■□□□□ 0.88
HOXB3-207ENST00000472863 NDFIP1Q9BT67 221 aa20.53■□□□□ 0.88
HOXB3-207ENST00000472863 GATCO43716 136 aaKnown RBP20.52■□□□□ 0.88
HOXB3-207ENST00000472863 CXCL1P09341 107 aa20.52■□□□□ 0.88
HOXB3-207ENST00000472863 ZNF80P51504 273 aaPredicted RBP20.52■□□□□ 0.88
HOXB3-207ENST00000472863 DAZAP1Q96EP5 407 aaKnown RBP20.52■□□□□ 0.88
HOXB3-207ENST00000472863 TRAV2A0A0B4J234 112 aa20.51■□□□□ 0.87
HOXB3-207ENST00000472863 SPATA3Q8NHX4 192 aa20.51■□□□□ 0.87
HOXB3-207ENST00000472863 PPP1R14DQ9NXH3 145 aa20.51■□□□□ 0.87
HOXB3-207ENST00000472863 VWFP04275 2813 aa20.51■□□□□ 0.87
HOXB3-207ENST00000472863 SPAG8Q99932 426 aaPredicted RBP20.51■□□□□ 0.87
HOXB3-207ENST00000472863 IL36BQ9NZH7 164 aa20.51■□□□□ 0.87
HOXB3-207ENST00000472863 ZNF256Q9Y2P7 627 aaPredicted RBP20.51■□□□□ 0.87
HOXB3-207ENST00000472863 TRAV25A0A0B4J276 109 aa20.5■□□□□ 0.87
HOXB3-207ENST00000472863 P01737 135 aa20.5■□□□□ 0.87
HOXB3-207ENST00000472863 SMUG1Q53HV7 270 aa20.49■□□□□ 0.87
HOXB3-207ENST00000472863 S100PP25815 95 aa20.49■□□□□ 0.87
HOXB3-207ENST00000472863 DEFB131AP59861 70 aa20.49■□□□□ 0.87
HOXB3-207ENST00000472863 IMMP2LQ96T52 175 aa20.49■□□□□ 0.87
HOXB3-207ENST00000472863 IGLV1-51P01701 117 aa20.48■□□□□ 0.87
HOXB3-207ENST00000472863 AGRNO00468 2067 aa20.48■□□□□ 0.87
HOXB3-207ENST00000472863 A0A1W2PPQ1 181 aa20.47■□□□□ 0.87
HOXB3-207ENST00000472863 SH2D1AO60880 128 aa20.47■□□□□ 0.87
HOXB3-207ENST00000472863 FAM162BQ5T6X4 162 aa20.47■□□□□ 0.87
HOXB3-207ENST00000472863 RPP21Q9H633 154 aaKnown RBP20.47■□□□□ 0.87
HOXB3-207ENST00000472863 A0A0J9YX75 114 aa20.47■□□□□ 0.87
HOXB3-207ENST00000472863 OR4C46A6NHA9 309 aa20.47■□□□□ 0.87
HOXB3-207ENST00000472863 TCL1AP56279 114 aa20.46■□□□□ 0.87
HOXB3-207ENST00000472863 KCNIP4Q6PIL6 250 aa20.46■□□□□ 0.87
HOXB3-207ENST00000472863 J3KRW8 73 aa20.45■□□□□ 0.86
HOXB3-207ENST00000472863 RPL19P84098 196 aaKnown RBP20.45■□□□□ 0.86
HOXB3-207ENST00000472863 ZNF124Q15973 351 aa20.45■□□□□ 0.86
HOXB3-207ENST00000472863 EBLN2Q6P2I7 272 aa20.45■□□□□ 0.86
HOXB3-207ENST00000472863 FAM19A4Q96LR4 140 aa20.45■□□□□ 0.86
HOXB3-207ENST00000472863 SAV1Q9H4B6 383 aaPredicted RBP20.45■□□□□ 0.86
HOXB3-207ENST00000472863 LENEPQ9Y5L5 61 aa20.45■□□□□ 0.86
HOXB3-207ENST00000472863 PRR9Q5T870 116 aa20.45■□□□□ 0.86
HOXB3-207ENST00000472863 OR2D3Q8NGH3 330 aa20.45■□□□□ 0.86
HOXB3-207ENST00000472863 MAP6D1Q9H9H5 199 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms