RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 KLF12Q9Y4X4 402 aa8.59□□□□□ -1.03
FN1-217ENST00000471193 TRAV34A0A0B4J273 112 aa8.58□□□□□ -1.04
FN1-217ENST00000471193 TRBV6-1A0A0K0K1D8 114 aa8.58□□□□□ -1.04
FN1-217ENST00000471193 FBLL1A6NHQ2 334 aaKnown RBP8.58□□□□□ -1.04
FN1-217ENST00000471193 UBE2G1P62253 170 aa8.58□□□□□ -1.04
FN1-217ENST00000471193 TMEM183BQ1AE95 376 aa8.58□□□□□ -1.04
FN1-217ENST00000471193 TMEM78Q5T7P6 136 aa8.58□□□□□ -1.04
FN1-217ENST00000471193 TRPT1Q86TN4 253 aaKnown RBP8.58□□□□□ -1.04
FN1-217ENST00000471193 Q8TAT8 98 aa8.58□□□□□ -1.04
FN1-217ENST00000471193 LINC00479Q96M42 142 aa8.58□□□□□ -1.04
FN1-217ENST00000471193 CLUHP3Q96NS8 147 aa8.58□□□□□ -1.04
FN1-217ENST00000471193 AGPAT4-IT1Q9H0P7 198 aa8.58□□□□□ -1.04
FN1-217ENST00000471193 SLC35B3Q9H1N7 401 aa8.58□□□□□ -1.04
FN1-217ENST00000471193 PARLQ9H300 379 aa8.58□□□□□ -1.04
FN1-217ENST00000471193 TREM1Q9NP99 234 aa8.58□□□□□ -1.04
FN1-217ENST00000471193 RBMY1BA6NDE4 496 aaKnown RBP8.57□□□□□ -1.04
FN1-217ENST00000471193 RBMY1EA6NEQ0 496 aaKnown RBP8.57□□□□□ -1.04
FN1-217ENST00000471193 S100A9P06702 114 aaKnown RBP8.57□□□□□ -1.04
FN1-217ENST00000471193 RBMY1DP0C7P1 496 aaKnown RBP8.57□□□□□ -1.04
FN1-217ENST00000471193 RPL35P42766 123 aaKnown RBP8.57□□□□□ -1.04
FN1-217ENST00000471193 FLI1Q01543 452 aaPredicted RBP8.57□□□□□ -1.04
FN1-217ENST00000471193 AMTNQ6UX39 209 aa8.57□□□□□ -1.04
FN1-217ENST00000471193 STHQ8IWL8 128 aa8.57□□□□□ -1.04
FN1-217ENST00000471193 FAM19A4Q96LR4 140 aa8.57□□□□□ -1.04
FN1-217ENST00000471193 SGK494Q96LW2 274 aa8.57□□□□□ -1.04
FN1-217ENST00000471193 IGF2BP2-AS1Q96M15 143 aa8.57□□□□□ -1.04
FN1-217ENST00000471193 LINC00477Q96M19 166 aa8.57□□□□□ -1.04
FN1-217ENST00000471193 ODF3Q96PU9 254 aa8.57□□□□□ -1.04
FN1-217ENST00000471193 SRD5A3Q9H8P0 318 aa8.57□□□□□ -1.04
FN1-217ENST00000471193 PPP1R14DQ9NXH3 145 aa8.57□□□□□ -1.04
FN1-217ENST00000471193 ZNF492Q9P255 531 aa8.57□□□□□ -1.04
FN1-217ENST00000471193 PSG8Q9UQ74 426 aa8.57□□□□□ -1.04
FN1-217ENST00000471193 MGAM2Q2M2H8 2515 aa8.56□□□□□ -1.04
FN1-217ENST00000471193 TRBV7-9A0A0J9YWB2 115 aa8.56□□□□□ -1.04
FN1-217ENST00000471193 LTAP01374 205 aa8.56□□□□□ -1.04
FN1-217ENST00000471193 SFTA3P0C7M3 94 aa8.56□□□□□ -1.04
FN1-217ENST00000471193 CT45A10P0DMU9 189 aa8.56□□□□□ -1.04
FN1-217ENST00000471193 ZNF138P52744 262 aa8.56□□□□□ -1.04
FN1-217ENST00000471193 CEBPGP53567 150 aa8.56□□□□□ -1.04
FN1-217ENST00000471193 TAS2R60P59551 318 aa8.56□□□□□ -1.04
FN1-217ENST00000471193 NDUFA5Q16718 116 aa8.56□□□□□ -1.04
FN1-217ENST00000471193 OR4B1Q8NGF8 309 aa8.56□□□□□ -1.04
FN1-217ENST00000471193 AURKAIP1Q9NWT8 199 aaPredicted RBP8.56□□□□□ -1.04
FN1-217ENST00000471193 TRBV20OR9-2A0A075B6H5 130 aa8.55□□□□□ -1.04
FN1-217ENST00000471193 C9JCJ5 164 aa8.55□□□□□ -1.04
FN1-217ENST00000471193 IGKV3-20P01619 116 aa8.55□□□□□ -1.04
FN1-217ENST00000471193 IGHV4-30-4P0DP06 118 aa8.55□□□□□ -1.04
FN1-217ENST00000471193 CRISP2P16562 243 aa8.55□□□□□ -1.04
FN1-217ENST00000471193 ZNF674Q2M3X9 581 aa8.55□□□□□ -1.04
FN1-217ENST00000471193 CENPWQ5EE01 88 aa8.55□□□□□ -1.04
FN1-217ENST00000471193 PRNTQ86SH4 94 aa8.55□□□□□ -1.04
FN1-217ENST00000471193 TVP23CQ96ET8 276 aa8.55□□□□□ -1.04
FN1-217ENST00000471193 ASCL2Q99929 193 aa8.55□□□□□ -1.04
FN1-217ENST00000471193 LENEPQ9Y5L5 61 aa8.55□□□□□ -1.04
FN1-217ENST00000471193 A8MZ25 164 aa8.54□□□□□ -1.04
FN1-217ENST00000471193 LEPP41159 167 aa8.54□□□□□ -1.04
FN1-217ENST00000471193 SMIM7Q9BQ49 75 aa8.54□□□□□ -1.04
FN1-217ENST00000471193 NDFIP1Q9BT67 221 aa8.54□□□□□ -1.04
FN1-217ENST00000471193 ZFP30Q9Y2G7 519 aa8.54□□□□□ -1.04
FN1-217ENST00000471193 SORL1Q92673 2214 aa8.54□□□□□ -1.04
FN1-217ENST00000471193 TMEM218A2RU14 115 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 ZNF727A8MUV8 499 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 KLLNB2CW77 178 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 M0R2Z0 102 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 RPL35AP18077 110 aaKnown RBP8.53□□□□□ -1.04
FN1-217ENST00000471193 ADCYAP1P18509 176 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 GNG4P50150 75 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 FAM74A3Q4VXF1 159 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 SOHLH1Q5JUK2 328 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 SAPCD1Q5SSQ6 148 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 MORN3Q6PF18 240 aaPredicted RBP8.53□□□□□ -1.04
FN1-217ENST00000471193 COX8CQ7Z4L0 72 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 BAGE2Q86Y30 109 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 SLC7A5P1Q8MH63 180 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 ZFAND2AQ8N6M9 145 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 SMIM12Q96EX1 92 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 C8orf49Q96NF6 230 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 MLST8Q9BVC4 326 aa8.53□□□□□ -1.04
FN1-217ENST00000471193 LOC102724200A0A096LPH7 203 aaPredicted RBP8.52□□□□□ -1.05
FN1-217ENST00000471193 PGPEP1LA6NFU8 196 aa8.52□□□□□ -1.05
FN1-217ENST00000471193 K7EIL1 84 aa8.52□□□□□ -1.05
FN1-217ENST00000471193 IGLV2-8P01709 118 aa8.52□□□□□ -1.05
FN1-217ENST00000471193 PRB2P02812 416 aaPredicted RBP8.52□□□□□ -1.05
FN1-217ENST00000471193 TSPOP30536 169 aa8.52□□□□□ -1.05
FN1-217ENST00000471193 CDKN1BP46527 198 aa8.52□□□□□ -1.05
FN1-217ENST00000471193 SPINK13Q1W4C9 94 aa8.52□□□□□ -1.05
FN1-217ENST00000471193 PRR9Q5T870 116 aa8.52□□□□□ -1.05
FN1-217ENST00000471193 LINC00322Q6ZN03 302 aaPredicted RBP8.52□□□□□ -1.05
FN1-217ENST00000471193 TMEM183AQ8IXX5 376 aa8.52□□□□□ -1.05
FN1-217ENST00000471193 NHLRC2Q8NBF2 726 aa8.52□□□□□ -1.05
FN1-217ENST00000471193 TUBA4BQ9H853 241 aa8.52□□□□□ -1.05
FN1-217ENST00000471193 LY96Q9Y6Y9 160 aa8.52□□□□□ -1.05
FN1-217ENST00000471193 NBEAL1Q6ZS30 2694 aa8.51□□□□□ -1.05
FN1-217ENST00000471193 KIR2DL5BA0A0G2JN68 375 aa8.51□□□□□ -1.05
FN1-217ENST00000471193 KIR2DL5BA0A0G2JPC4 375 aa8.51□□□□□ -1.05
FN1-217ENST00000471193 CRXO43186 299 aaPredicted RBP8.51□□□□□ -1.05
FN1-217ENST00000471193 AMBPP02760 352 aa8.51□□□□□ -1.05
FN1-217ENST00000471193 GIG44P09565 113 aaPredicted RBP8.51□□□□□ -1.05
FN1-217ENST00000471193 FXYD7P58549 80 aa8.51□□□□□ -1.05
FN1-217ENST00000471193 NUTF2P61970 127 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms