RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 ARL2-SNX15V9GYD0 113 aa8.47□□□□□ -1.05
HLA-C-206ENST00000470363 TRAV34A0A0B4J273 112 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 A0A0J9YWU9 116 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 UBE2CO00762 179 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 SPRY2O43597 315 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 ZNF688P0C7X2 276 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 TAGLN2P37802 199 aaKnown RBP8.46□□□□□ -1.06
HLA-C-206ENST00000470363 MEOX2P50222 304 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 PAFAH1B2P68402 229 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 PSG3Q16557 428 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 LYPD1Q8N2G4 141 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 EIF4E3Q8N5X7 224 aaKnown RBP8.46□□□□□ -1.06
HLA-C-206ENST00000470363 CYB561D1Q8N8Q1 229 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 C5orf17Q8NAS9 161 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 CMTM2Q8TAZ6 248 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 SGK494Q96LW2 274 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 LINC00479Q96M42 142 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 DERL1Q9BUN8 251 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 MAP6D1Q9H9H5 199 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 EPDR1Q9UM22 224 aa8.46□□□□□ -1.06
HLA-C-206ENST00000470363 IGKV2-40A0A087WW87 121 aaPredicted RBP8.45□□□□□ -1.06
HLA-C-206ENST00000470363 F6UB75 175 aa8.45□□□□□ -1.06
HLA-C-206ENST00000470363 F6UZH7 168 aa8.45□□□□□ -1.06
HLA-C-206ENST00000470363 PEX7O00628 323 aa8.45□□□□□ -1.06
HLA-C-206ENST00000470363 ISLRO14498 428 aa8.45□□□□□ -1.06
HLA-C-206ENST00000470363 IGKV2D-40P01614 121 aaPredicted RBP8.45□□□□□ -1.06
HLA-C-206ENST00000470363 TCRAP04437 139 aa8.45□□□□□ -1.06
HLA-C-206ENST00000470363 ZNF705DP0CH99 300 aaPredicted RBP8.45□□□□□ -1.06
HLA-C-206ENST00000470363 ZNF705BP0CI00 300 aaPredicted RBP8.45□□□□□ -1.06
HLA-C-206ENST00000470363 ID1P41134 155 aa8.45□□□□□ -1.06
HLA-C-206ENST00000470363 APOC4P55056 127 aa8.45□□□□□ -1.06
HLA-C-206ENST00000470363 PSMG4Q5JS54 123 aa8.45□□□□□ -1.06
HLA-C-206ENST00000470363 UQCC3Q6UW78 93 aa8.45□□□□□ -1.06
HLA-C-206ENST00000470363 RPUSD4Q96CM3 377 aaKnown RBP8.45□□□□□ -1.06
HLA-C-206ENST00000470363 TXNDC17Q9BRA2 123 aa8.45□□□□□ -1.06
HLA-C-206ENST00000470363 NKX6-2Q9C056 277 aaPredicted RBP8.45□□□□□ -1.06
HLA-C-206ENST00000470363 DIRC3C9JPN6 131 aa8.44□□□□□ -1.06
HLA-C-206ENST00000470363 PDE6DO43924 150 aa8.44□□□□□ -1.06
HLA-C-206ENST00000470363 SFTA3P0C7M3 94 aa8.44□□□□□ -1.06
HLA-C-206ENST00000470363 AKR1C3P42330 323 aa8.44□□□□□ -1.06
HLA-C-206ENST00000470363 CSN1S1P47710 185 aa8.44□□□□□ -1.06
HLA-C-206ENST00000470363 ZNF674Q2M3X9 581 aa8.44□□□□□ -1.06
HLA-C-206ENST00000470363 DEFB135Q30KP9 77 aa8.44□□□□□ -1.06
HLA-C-206ENST00000470363 CEMP1Q6PRD7 247 aaPredicted RBP8.44□□□□□ -1.06
HLA-C-206ENST00000470363 GOLT1AQ6ZVE7 132 aa8.44□□□□□ -1.06
HLA-C-206ENST00000470363 ZNF738Q8NE65 137 aa8.44□□□□□ -1.06
HLA-C-206ENST00000470363 C11orf52Q96A22 123 aa8.44□□□□□ -1.06
HLA-C-206ENST00000470363 SLC35B3Q9H1N7 401 aa8.44□□□□□ -1.06
HLA-C-206ENST00000470363 SMDT1Q9H4I9 107 aa8.44□□□□□ -1.06
HLA-C-206ENST00000470363 PRELID1Q9Y255 219 aa8.44□□□□□ -1.06
HLA-C-206ENST00000470363 TRAV8-1A0A0A6YYK1 113 aa8.43□□□□□ -1.06
HLA-C-206ENST00000470363 TMEM218A2RU14 115 aa8.43□□□□□ -1.06
HLA-C-206ENST00000470363 OR4C46A6NHA9 309 aa8.43□□□□□ -1.06
HLA-C-206ENST00000470363 ADCYAP1P18509 176 aa8.43□□□□□ -1.06
HLA-C-206ENST00000470363 DEFB131AP59861 70 aa8.43□□□□□ -1.06
HLA-C-206ENST00000470363 ERCC8Q13216 396 aa8.43□□□□□ -1.06
HLA-C-206ENST00000470363 ZNF124Q15973 351 aa8.43□□□□□ -1.06
HLA-C-206ENST00000470363 APRG1Q8IVJ8 170 aa8.43□□□□□ -1.06
HLA-C-206ENST00000470363 C2CD4CQ8TF44 421 aa8.43□□□□□ -1.06
HLA-C-206ENST00000470363 HIST1H2BAQ96A08 127 aa8.43□□□□□ -1.06
HLA-C-206ENST00000470363 VGLL1Q99990 258 aa8.43□□□□□ -1.06
HLA-C-206ENST00000470363 PARLQ9H300 379 aa8.43□□□□□ -1.06
HLA-C-206ENST00000470363 TRAV2A0A0B4J234 112 aa8.42□□□□□ -1.06
HLA-C-206ENST00000470363 NUPR2A6NF83 97 aa8.42□□□□□ -1.06
HLA-C-206ENST00000470363 KNCNA6PVL3 124 aa8.42□□□□□ -1.06
HLA-C-206ENST00000470363 TMEM250H0YL14 139 aa8.42□□□□□ -1.06
HLA-C-206ENST00000470363 SNRPD3P62318 126 aaKnown RBP8.42□□□□□ -1.06
HLA-C-206ENST00000470363 SOHLH1Q5JUK2 328 aa8.42□□□□□ -1.06
HLA-C-206ENST00000470363 GDF5OSQ5U4N7 250 aa8.42□□□□□ -1.06
HLA-C-206ENST00000470363 MRPL53Q96EL3 112 aaKnown RBP8.42□□□□□ -1.06
HLA-C-206ENST00000470363 ATG101Q9BSB4 218 aa8.42□□□□□ -1.06
HLA-C-206ENST00000470363 CXorf65A6NEN9 183 aa8.41□□□□□ -1.06
HLA-C-206ENST00000470363 PGPEP1LA6NFU8 196 aa8.41□□□□□ -1.06
HLA-C-206ENST00000470363 ZNF727A8MUV8 499 aa8.41□□□□□ -1.06
HLA-C-206ENST00000470363 F8W036 122 aa8.41□□□□□ -1.06
HLA-C-206ENST00000470363 ATP6V1G1O75348 118 aa8.41□□□□□ -1.06
HLA-C-206ENST00000470363 IGLV2-11P01706 119 aa8.41□□□□□ -1.06
HLA-C-206ENST00000470363 RPL35AP18077 110 aaKnown RBP8.41□□□□□ -1.06
HLA-C-206ENST00000470363 RPL35P42766 123 aaKnown RBP8.41□□□□□ -1.06
HLA-C-206ENST00000470363 CNN1P51911 297 aaKnown RBP8.41□□□□□ -1.06
HLA-C-206ENST00000470363 SAMD13Q5VXD3 122 aa8.41□□□□□ -1.06
HLA-C-206ENST00000470363 PRNTQ86SH4 94 aa8.41□□□□□ -1.06
HLA-C-206ENST00000470363 Q8TAT8 98 aa8.41□□□□□ -1.06
HLA-C-206ENST00000470363 SMIM7Q9BQ49 75 aa8.41□□□□□ -1.06
HLA-C-206ENST00000470363 AGPAT4-IT1Q9H0P7 198 aa8.41□□□□□ -1.06
HLA-C-206ENST00000470363 CSTL1Q9H114 145 aa8.41□□□□□ -1.06
HLA-C-206ENST00000470363 CLEC5AQ9NY25 188 aa8.41□□□□□ -1.06
HLA-C-206ENST00000470363 TRBV20OR9-2A0A075B6H5 130 aa8.4□□□□□ -1.06
HLA-C-206ENST00000470363 NDUFS6O75380 124 aaKnown RBP8.4□□□□□ -1.06
HLA-C-206ENST00000470363 LY6G6CO95867 125 aa8.4□□□□□ -1.06
HLA-C-206ENST00000470363 IGKV3-20P01619 116 aa8.4□□□□□ -1.06
HLA-C-206ENST00000470363 CMC4P56277 68 aaPredicted RBP8.4□□□□□ -1.06
HLA-C-206ENST00000470363 UBE2G1P62253 170 aa8.4□□□□□ -1.06
HLA-C-206ENST00000470363 HIST1H1AQ02539 215 aaPredicted RBP8.4□□□□□ -1.06
HLA-C-206ENST00000470363 TMEM183BQ1AE95 376 aa8.4□□□□□ -1.06
HLA-C-206ENST00000470363 DMRTA1Q5VZB9 504 aa8.4□□□□□ -1.06
HLA-C-206ENST00000470363 NHLRC2Q8NBF2 726 aa8.4□□□□□ -1.06
HLA-C-206ENST00000470363 OR8A1Q8NGG7 326 aa8.4□□□□□ -1.06
HLA-C-206ENST00000470363 TCEAL7Q9BRU2 100 aa8.4□□□□□ -1.06
HLA-C-206ENST00000470363 PSG8Q9UQ74 426 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms