RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 CBLN1P23435 193 aa13.72□□□□□ -0.21
SMC4-211ENST00000469858 TRAV9-1A0A075B6T8 112 aa13.72□□□□□ -0.21
SMC4-211ENST00000469858 LOC105371267A0A1B0GV96 52 aa13.72□□□□□ -0.21
SMC4-211ENST00000469858 SAPCD1Q5SSQ6 148 aa13.72□□□□□ -0.21
SMC4-211ENST00000469858 GPR61Q9BZJ8 451 aa13.72□□□□□ -0.21
SMC4-211ENST00000469858 SPINK4O60575 86 aa13.71□□□□□ -0.21
SMC4-211ENST00000469858 NDFIP1Q9BT67 221 aa13.71□□□□□ -0.21
SMC4-211ENST00000469858 HIVEP1P15822 2718 aa13.71□□□□□ -0.21
SMC4-211ENST00000469858 NDUFA7O95182 113 aa13.71□□□□□ -0.22
SMC4-211ENST00000469858 CRIP1P50238 77 aa13.71□□□□□ -0.22
SMC4-211ENST00000469858 WFDC3Q8IUB2 231 aa13.71□□□□□ -0.22
SMC4-211ENST00000469858 TCF21O43680 179 aa13.7□□□□□ -0.22
SMC4-211ENST00000469858 SRSF2Q01130 221 aaKnown RBP13.7□□□□□ -0.22
SMC4-211ENST00000469858 TSKUQ8WUA8 353 aa13.7□□□□□ -0.22
SMC4-211ENST00000469858 WFDC12Q8WWY7 111 aa13.7□□□□□ -0.22
SMC4-211ENST00000469858 CITED2Q99967 270 aaPredicted RBP13.7□□□□□ -0.22
SMC4-211ENST00000469858 AGPAT4-IT1Q9H0P7 198 aa13.7□□□□□ -0.22
SMC4-211ENST00000469858 RNF114Q9Y508 228 aa13.7□□□□□ -0.22
SMC4-211ENST00000469858 NPIPB6E9PJ23 425 aa13.69□□□□□ -0.22
SMC4-211ENST00000469858 M0QZ24 198 aa13.69□□□□□ -0.22
SMC4-211ENST00000469858 ZNF705DP0CH99 300 aaPredicted RBP13.69□□□□□ -0.22
SMC4-211ENST00000469858 ZNF705BP0CI00 300 aaPredicted RBP13.69□□□□□ -0.22
SMC4-211ENST00000469858 TMEM78Q5T7P6 136 aa13.69□□□□□ -0.22
SMC4-211ENST00000469858 DCANP1Q8TF63 244 aa13.69□□□□□ -0.22
SMC4-211ENST00000469858 NEU1Q99519 415 aa13.69□□□□□ -0.22
SMC4-211ENST00000469858 TFPI2P48307 235 aa13.69□□□□□ -0.22
SMC4-211ENST00000469858 CT83Q5H943 113 aa13.69□□□□□ -0.22
SMC4-211ENST00000469858 OR2D3Q8NGH3 330 aa13.69□□□□□ -0.22
SMC4-211ENST00000469858 DLX4Q92988 240 aaPredicted RBP13.69□□□□□ -0.22
SMC4-211ENST00000469858 MS4A6AQ9H2W1 248 aa13.69□□□□□ -0.22
SMC4-211ENST00000469858 HIGD1CA8MV81 97 aa13.68□□□□□ -0.22
SMC4-211ENST00000469858 A8MWL6 223 aa13.68□□□□□ -0.22
SMC4-211ENST00000469858 DEFB1P60022 68 aa13.68□□□□□ -0.22
SMC4-211ENST00000469858 C9orf47Q6ZRZ4 202 aa13.68□□□□□ -0.22
SMC4-211ENST00000469858 COX8CQ7Z4L0 72 aa13.68□□□□□ -0.22
SMC4-211ENST00000469858 OR4B1Q8NGF8 309 aa13.68□□□□□ -0.22
SMC4-211ENST00000469858 OR9G4Q8NGQ1 327 aa13.68□□□□□ -0.22
SMC4-211ENST00000469858 FRZBQ92765 325 aa13.68□□□□□ -0.22
SMC4-211ENST00000469858 RAX2Q96IS3 184 aa13.68□□□□□ -0.22
SMC4-211ENST00000469858 PEMTQ9UBM1 199 aa13.68□□□□□ -0.22
SMC4-211ENST00000469858 NAT8BQ9UHF3 227 aa13.68□□□□□ -0.22
SMC4-211ENST00000469858 TSSC4Q9Y5U2 329 aaPredicted RBP13.68□□□□□ -0.22
SMC4-211ENST00000469858 FN1P02751 2386 aaKnown RBP13.68□□□□□ -0.22
SMC4-211ENST00000469858 FLNBO75369 2602 aaKnown RBP13.67□□□□□ -0.22
SMC4-211ENST00000469858 NSD1Q96L73 2696 aaPredicted RBP13.67□□□□□ -0.22
SMC4-211ENST00000469858 IZUMO1RA6ND01 250 aa13.67□□□□□ -0.22
SMC4-211ENST00000469858 SH2D1AO60880 128 aa13.67□□□□□ -0.22
SMC4-211ENST00000469858 S100A6P06703 90 aa13.67□□□□□ -0.22
SMC4-211ENST00000469858 FRMD6-AS1P0C7T7 363 aa13.67□□□□□ -0.22
SMC4-211ENST00000469858 ZNF138P52744 262 aa13.67□□□□□ -0.22
SMC4-211ENST00000469858 RPL19P84098 196 aaKnown RBP13.67□□□□□ -0.22
SMC4-211ENST00000469858 SMUG1Q53HV7 270 aa13.67□□□□□ -0.22
SMC4-211ENST00000469858 FAM162BQ5T6X4 162 aa13.67□□□□□ -0.22
SMC4-211ENST00000469858 MRPL54Q6P161 138 aaKnown RBP13.67□□□□□ -0.22
SMC4-211ENST00000469858 ADAMTSL5Q6ZMM2 481 aa13.67□□□□□ -0.22
SMC4-211ENST00000469858 NUP35Q8NFH5 326 aa13.67□□□□□ -0.22
SMC4-211ENST00000469858 PHOX2AO14813 284 aa13.67□□□□□ -0.22
SMC4-211ENST00000469858 ID1P41134 155 aa13.67□□□□□ -0.22
SMC4-211ENST00000469858 ACTL10Q5JWF8 245 aa13.67□□□□□ -0.22
SMC4-211ENST00000469858 SAMD13Q5VXD3 122 aa13.67□□□□□ -0.22
SMC4-211ENST00000469858 OVOL1O14753 267 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 HIST1H2BKO60814 126 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 HIST1H2BJP06899 126 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 TRGC1P0CF51 173 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 GZMBP10144 247 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 HIST1H2BOP23527 126 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 HIST1H2BBP33778 126 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 ZNF80P51504 273 aaPredicted RBP13.66□□□□□ -0.22
SMC4-211ENST00000469858 HIST1H2BDP58876 126 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 HIST1H2BCP62807 126 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 FABP9Q0Z7S8 132 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 HIST2H2BEQ16778 126 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.66□□□□□ -0.22
SMC4-211ENST00000469858 OR10J6PQ8NGY7 276 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 HIST1H2BHQ93079 126 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 HIST1H2BNQ99877 126 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 HIST1H2BMQ99879 126 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 TRAPPC1Q9Y5R8 145 aa13.66□□□□□ -0.22
SMC4-211ENST00000469858 CRLF1O75462 422 aa13.65□□□□□ -0.22
SMC4-211ENST00000469858 PROK1P58294 105 aa13.65□□□□□ -0.22
SMC4-211ENST00000469858 GTSF1Q8WW33 167 aa13.65□□□□□ -0.22
SMC4-211ENST00000469858 F6UB75 175 aa13.65□□□□□ -0.22
SMC4-211ENST00000469858 CCL24O00175 119 aa13.65□□□□□ -0.22
SMC4-211ENST00000469858 SETD2Q9BYW2 2564 aaPredicted RBP13.64□□□□□ -0.23
SMC4-211ENST00000469858 HIST1H1AQ02539 215 aaPredicted RBP13.64□□□□□ -0.23
SMC4-211ENST00000469858 FHL3Q13643 280 aa13.64□□□□□ -0.23
SMC4-211ENST00000469858 GFRA4Q9GZZ7 299 aa13.64□□□□□ -0.23
SMC4-211ENST00000469858 SNURFLB1AK76 121 aa13.63□□□□□ -0.23
SMC4-211ENST00000469858 ZNF688P0C7X2 276 aa13.63□□□□□ -0.23
SMC4-211ENST00000469858 SNRPEP62304 92 aaKnown RBP13.63□□□□□ -0.23
SMC4-211ENST00000469858 OR8A1Q8NGG7 326 aa13.63□□□□□ -0.23
SMC4-211ENST00000469858 PGLYRP4Q96LB8 373 aa13.63□□□□□ -0.23
SMC4-211ENST00000469858 SAV1Q9H4B6 383 aaPredicted RBP13.63□□□□□ -0.23
SMC4-211ENST00000469858 SETXQ7Z333 2677 aaKnown RBP13.63□□□□□ -0.23
SMC4-211ENST00000469858 K7EQG2 157 aa13.63□□□□□ -0.23
SMC4-211ENST00000469858 LINC00477Q96M19 166 aa13.63□□□□□ -0.23
SMC4-211ENST00000469858 TMSB15BA0A087X1C1 80 aa13.62□□□□□ -0.23
SMC4-211ENST00000469858 TMEM189A5PLL7 270 aa13.62□□□□□ -0.23
SMC4-211ENST00000469858 CSN3P07498 182 aa13.62□□□□□ -0.23
SMC4-211ENST00000469858 PSMG4Q5JS54 123 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms