RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 ZNF705AQ6ZN79 300 aaPredicted RBP8.67□□□□□ -1.02
VPS13D-204ENST00000469054 C9orf47Q6ZRZ4 202 aa8.67□□□□□ -1.02
VPS13D-204ENST00000469054 C1orf158Q8N1D5 194 aa8.67□□□□□ -1.02
VPS13D-204ENST00000469054 SFT2D1Q8WV19 159 aa8.67□□□□□ -1.02
VPS13D-204ENST00000469054 VGLL1Q99990 258 aa8.67□□□□□ -1.02
VPS13D-204ENST00000469054 X6R8D5 127 aa8.67□□□□□ -1.02
VPS13D-204ENST00000469054 TRAV12-2A0A075B6T6 113 aa8.66□□□□□ -1.02
VPS13D-204ENST00000469054 RBAKDNA6NC62 111 aa8.66□□□□□ -1.02
VPS13D-204ENST00000469054 INSP01308 110 aa8.66□□□□□ -1.02
VPS13D-204ENST00000469054 SLC25A5P05141 298 aaKnown RBP8.66□□□□□ -1.02
VPS13D-204ENST00000469054 H2AFB1P0C5Y9 115 aa8.66□□□□□ -1.02
VPS13D-204ENST00000469054 SULT1A2P50226 295 aa8.66□□□□□ -1.02
VPS13D-204ENST00000469054 SUMO1P63165 101 aaKnown RBP8.66□□□□□ -1.02
VPS13D-204ENST00000469054 ZNF492Q9P255 531 aa8.66□□□□□ -1.02
VPS13D-204ENST00000469054 GOLT1BQ9Y3E0 138 aa8.66□□□□□ -1.02
VPS13D-204ENST00000469054 IGHV3OR16-12A0A075B7B8 117 aa8.65□□□□□ -1.02
VPS13D-204ENST00000469054 A0A0J9YWU9 116 aa8.65□□□□□ -1.02
VPS13D-204ENST00000469054 MIFP14174 115 aa8.65□□□□□ -1.02
VPS13D-204ENST00000469054 LEPP41159 167 aa8.65□□□□□ -1.02
VPS13D-204ENST00000469054 KIR3DS1Q14943 382 aa8.65□□□□□ -1.02
VPS13D-204ENST00000469054 TMEM78Q5T7P6 136 aa8.65□□□□□ -1.02
VPS13D-204ENST00000469054 LCE2CQ5TA81 110 aa8.65□□□□□ -1.02
VPS13D-204ENST00000469054 C5orf17Q8NAS9 161 aa8.65□□□□□ -1.02
VPS13D-204ENST00000469054 FAM19A4Q96LR4 140 aa8.65□□□□□ -1.02
VPS13D-204ENST00000469054 NEU1Q99519 415 aa8.65□□□□□ -1.02
VPS13D-204ENST00000469054 NKX6-2Q9C056 277 aaPredicted RBP8.65□□□□□ -1.02
VPS13D-204ENST00000469054 RPH3ALQ9UNE2 315 aa8.65□□□□□ -1.02
VPS13D-204ENST00000469054 YTHDF2Q9Y5A9 579 aaKnown RBP8.65□□□□□ -1.02
VPS13D-204ENST00000469054 TGP01266 2768 aa8.65□□□□□ -1.03
VPS13D-204ENST00000469054 SMIM9A6NGZ8 99 aa8.64□□□□□ -1.03
VPS13D-204ENST00000469054 FAM74A7A6NL05 159 aa8.64□□□□□ -1.03
VPS13D-204ENST00000469054 GGTLC3B5MD39 225 aa8.64□□□□□ -1.03
VPS13D-204ENST00000469054 ZNF138P52744 262 aa8.64□□□□□ -1.03
VPS13D-204ENST00000469054 UBE2G2P60604 165 aa8.64□□□□□ -1.03
VPS13D-204ENST00000469054 GNG5P63218 68 aa8.64□□□□□ -1.03
VPS13D-204ENST00000469054 GOLT1AQ6ZVE7 132 aa8.64□□□□□ -1.03
VPS13D-204ENST00000469054 Q8NAQ8 132 aa8.64□□□□□ -1.03
VPS13D-204ENST00000469054 TMEM208Q9BTX3 173 aa8.64□□□□□ -1.03
VPS13D-204ENST00000469054 EPDR1Q9UM22 224 aa8.64□□□□□ -1.03
VPS13D-204ENST00000469054 IGHV4-28A0A0C4DH34 117 aa8.63□□□□□ -1.03
VPS13D-204ENST00000469054 TRBV7-9A0A0J9YWB2 115 aa8.63□□□□□ -1.03
VPS13D-204ENST00000469054 A0A1B0GV50 99 aa8.63□□□□□ -1.03
VPS13D-204ENST00000469054 SERTM2A0A1B0GWG4 89 aa8.63□□□□□ -1.03
VPS13D-204ENST00000469054 KLLNB2CW77 178 aa8.63□□□□□ -1.03
VPS13D-204ENST00000469054 J3KRW8 73 aa8.63□□□□□ -1.03
VPS13D-204ENST00000469054 TCRAP04437 139 aa8.63□□□□□ -1.03
VPS13D-204ENST00000469054 NMBP08949 121 aa8.63□□□□□ -1.03
VPS13D-204ENST00000469054 RBMY1A1P0DJD3 496 aaKnown RBP8.63□□□□□ -1.03
VPS13D-204ENST00000469054 RBMY1CP0DJD4 496 aa8.63□□□□□ -1.03
VPS13D-204ENST00000469054 CRISP2P16562 243 aa8.63□□□□□ -1.03
VPS13D-204ENST00000469054 RBMY1FQ15415 496 aaKnown RBP8.63□□□□□ -1.03
VPS13D-204ENST00000469054 GFI1BQ5VTD9 330 aa8.63□□□□□ -1.03
VPS13D-204ENST00000469054 Q8TAT8 98 aa8.63□□□□□ -1.03
VPS13D-204ENST00000469054 LINC01587Q99440 93 aa8.63□□□□□ -1.03
VPS13D-204ENST00000469054 C20orf144Q9BQM9 153 aa8.63□□□□□ -1.03
VPS13D-204ENST00000469054 C11orf68Q9H3H3 251 aaKnown RBP8.63□□□□□ -1.03
VPS13D-204ENST00000469054 NBEAL2Q6ZNJ1 2754 aa8.62□□□□□ -1.03
VPS13D-204ENST00000469054 TRAV1-1A0A0B4J248 108 aa8.62□□□□□ -1.03
VPS13D-204ENST00000469054 TEX46H3BTG2 121 aa8.62□□□□□ -1.03
VPS13D-204ENST00000469054 DEFB4AO15263 64 aa8.62□□□□□ -1.03
VPS13D-204ENST00000469054 HBE1P02100 147 aa8.62□□□□□ -1.03
VPS13D-204ENST00000469054 LCE2AQ5TA79 106 aaPredicted RBP8.62□□□□□ -1.03
VPS13D-204ENST00000469054 ALKAL2Q6UX46 152 aa8.62□□□□□ -1.03
VPS13D-204ENST00000469054 TMEM256Q8N2U0 113 aa8.62□□□□□ -1.03
VPS13D-204ENST00000469054 ZFAND2AQ8N6M9 145 aa8.62□□□□□ -1.03
VPS13D-204ENST00000469054 LENEPQ9Y5L5 61 aa8.62□□□□□ -1.03
VPS13D-204ENST00000469054 ARL2-SNX15V9GYD0 113 aa8.62□□□□□ -1.03
VPS13D-204ENST00000469054 TRAV8-1A0A0A6YYK1 113 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 C7orf71A4D174 169 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 H7BYZ3 331 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 K7EQM0 130 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 PAGE4O60829 102 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 IFNA7P01567 189 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 GPX1P07203 203 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 PPT1P50897 306 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 TAS2R60P59551 318 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 RRN3P1Q2M238 152 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 CST9LP1Q5W188 147 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 CCDC28AQ8IWP9 274 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 CYB561D1Q8N8Q1 229 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 MUC7Q8TAX7 377 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 HIST1H2BAQ96A08 127 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 ATG101Q9BSB4 218 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 TENM3Q9P273 2699 aa8.61□□□□□ -1.03
VPS13D-204ENST00000469054 COL7A1Q02388 2944 aa8.6□□□□□ -1.03
VPS13D-204ENST00000469054 TRAV12-3A0A0B4J271 114 aa8.6□□□□□ -1.03
VPS13D-204ENST00000469054 ZNF705GA8MUZ8 300 aaPredicted RBP8.6□□□□□ -1.03
VPS13D-204ENST00000469054 ZNF324O75467 553 aaPredicted RBP8.6□□□□□ -1.03
VPS13D-204ENST00000469054 PRM2P04554 102 aa8.6□□□□□ -1.03
VPS13D-204ENST00000469054 RNASE4P34096 147 aaKnown RBP8.6□□□□□ -1.03
VPS13D-204ENST00000469054 CCL20P78556 96 aa8.6□□□□□ -1.03
VPS13D-204ENST00000469054 IL17DQ8TAD2 202 aa8.6□□□□□ -1.03
VPS13D-204ENST00000469054 SGK494Q96LW2 274 aa8.6□□□□□ -1.03
VPS13D-204ENST00000469054 NIPSNAP3BQ9BS92 247 aa8.6□□□□□ -1.03
VPS13D-204ENST00000469054 PSG8Q9UQ74 426 aa8.6□□□□□ -1.03
VPS13D-204ENST00000469054 LOC102723971A0A1B0GUV8 181 aa8.59□□□□□ -1.03
VPS13D-204ENST00000469054 TMEM189A5PLL7 270 aa8.59□□□□□ -1.03
VPS13D-204ENST00000469054 FBLL1A6NHQ2 334 aaKnown RBP8.59□□□□□ -1.03
VPS13D-204ENST00000469054 F6UZH7 168 aa8.59□□□□□ -1.03
VPS13D-204ENST00000469054 PEX7O00628 323 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms