RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 FABP12A6NFH5 140 aa6.58□□□□□ -1.36
HDAC3-203ENST00000467533 TBPP20226 339 aa6.58□□□□□ -1.36
HDAC3-203ENST00000467533 RPP30P78346 268 aaKnown RBP6.58□□□□□ -1.36
HDAC3-203ENST00000467533 LYZL2Q7Z4W2 148 aa6.58□□□□□ -1.36
HDAC3-203ENST00000467533 DAZ4Q86SG3 579 aaKnown RBP6.58□□□□□ -1.36
HDAC3-203ENST00000467533 OR4C5Q8NGB2 326 aa6.58□□□□□ -1.36
HDAC3-203ENST00000467533 DAZ3Q9NR90 486 aaKnown RBP6.58□□□□□ -1.36
HDAC3-203ENST00000467533 A0A0B4J2A0 478 aa6.57□□□□□ -1.36
HDAC3-203ENST00000467533 IGHV3-16A0A0C4DH30 117 aa6.57□□□□□ -1.36
HDAC3-203ENST00000467533 RAB3DO95716 219 aa6.57□□□□□ -1.36
HDAC3-203ENST00000467533 TGFBR1P36897 503 aa6.57□□□□□ -1.36
HDAC3-203ENST00000467533 SELENOTP62341 195 aa6.57□□□□□ -1.36
HDAC3-203ENST00000467533 C14orf177Q52M58 125 aa6.57□□□□□ -1.36
HDAC3-203ENST00000467533 PRR9Q5T870 116 aa6.57□□□□□ -1.36
HDAC3-203ENST00000467533 PATE2Q6UY27 113 aa6.57□□□□□ -1.36
HDAC3-203ENST00000467533 Q6ZQT7 251 aa6.57□□□□□ -1.36
HDAC3-203ENST00000467533 LINC00305Q7Z4B0 112 aa6.57□□□□□ -1.36
HDAC3-203ENST00000467533 SHPKQ9UHJ6 478 aa6.57□□□□□ -1.36
HDAC3-203ENST00000467533 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-203ENST00000467533 LPAP08519 4548 aa6.57□□□□□ -1.36
HDAC3-203ENST00000467533 H3BP45 60 aa6.56□□□□□ -1.36
HDAC3-203ENST00000467533 WRBO00258 174 aa6.56□□□□□ -1.36
HDAC3-203ENST00000467533 SPANXN5Q5MJ07 72 aa6.56□□□□□ -1.36
HDAC3-203ENST00000467533 MUC21Q5SSG8 566 aa6.56□□□□□ -1.36
HDAC3-203ENST00000467533 FAAP20Q6NZ36 180 aa6.56□□□□□ -1.36
HDAC3-203ENST00000467533 RASL10AQ92737 203 aa6.56□□□□□ -1.36
HDAC3-203ENST00000467533 FAM19A4Q96LR4 140 aa6.56□□□□□ -1.36
HDAC3-203ENST00000467533 SRRQ9GZT4 340 aa6.56□□□□□ -1.36
HDAC3-203ENST00000467533 COMMD3Q9UBI1 195 aa6.56□□□□□ -1.36
HDAC3-203ENST00000467533 KCNIP3Q9Y2W7 256 aa6.56□□□□□ -1.36
HDAC3-203ENST00000467533 A0A0J9YXV3 536 aa6.55□□□□□ -1.36
HDAC3-203ENST00000467533 H3BQ15 152 aa6.55□□□□□ -1.36
HDAC3-203ENST00000467533 M0R3E3 92 aa6.55□□□□□ -1.36
HDAC3-203ENST00000467533 MED6O75586 246 aa6.55□□□□□ -1.36
HDAC3-203ENST00000467533 APOA1P02647 267 aa6.55□□□□□ -1.36
HDAC3-203ENST00000467533 IGLC2P0DOY2 106 aa6.55□□□□□ -1.36
HDAC3-203ENST00000467533 GATA1P15976 413 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-203ENST00000467533 CRISP2P16562 243 aa6.55□□□□□ -1.36
HDAC3-203ENST00000467533 SURF2Q15527 256 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-203ENST00000467533 VWC2Q2TAL6 325 aa6.55□□□□□ -1.36
HDAC3-203ENST00000467533 OR51S1Q8NGJ8 323 aa6.55□□□□□ -1.36
HDAC3-203ENST00000467533 OR52I2Q8NH67 350 aa6.55□□□□□ -1.36
HDAC3-203ENST00000467533 SAT2Q96F10 170 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-203ENST00000467533 LINC00477Q96M19 166 aa6.55□□□□□ -1.36
HDAC3-203ENST00000467533 CIB3Q96Q77 187 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-203ENST00000467533 PRADC1Q9BSG0 188 aa6.55□□□□□ -1.36
HDAC3-203ENST00000467533 SPXQ9BT56 116 aa6.55□□□□□ -1.36
HDAC3-203ENST00000467533 MRPS26Q9BYN8 205 aaKnown RBP6.55□□□□□ -1.36
HDAC3-203ENST00000467533 GTSF1LQ9H1H1 148 aa6.55□□□□□ -1.36
HDAC3-203ENST00000467533 VCX3AQ9NNX9 186 aa6.55□□□□□ -1.36
HDAC3-203ENST00000467533 PANO1I0J062 215 aa6.54□□□□□ -1.36
HDAC3-203ENST00000467533 COX7A2P2O60397 106 aa6.54□□□□□ -1.36
HDAC3-203ENST00000467533 SMIM18P0DKX4 95 aa6.54□□□□□ -1.36
HDAC3-203ENST00000467533 RPS19P39019 145 aaKnown RBP6.54□□□□□ -1.36
HDAC3-203ENST00000467533 TAS2R19P59542 299 aa6.54□□□□□ -1.36
HDAC3-203ENST00000467533 RHOHQ15669 191 aa6.54□□□□□ -1.36
HDAC3-203ENST00000467533 ZFAND2AQ8N6M9 145 aa6.54□□□□□ -1.36
HDAC3-203ENST00000467533 TMEM229BQ8NBD8 167 aa6.54□□□□□ -1.36
HDAC3-203ENST00000467533 MRPL53Q96EL3 112 aaKnown RBP6.54□□□□□ -1.36
HDAC3-203ENST00000467533 DNAJC30Q96LL9 226 aa6.54□□□□□ -1.36
HDAC3-203ENST00000467533 AGPAT4-IT1Q9H0P7 198 aa6.54□□□□□ -1.36
HDAC3-203ENST00000467533 STRAPQ9Y3F4 350 aaKnown RBP6.54□□□□□ -1.36
HDAC3-203ENST00000467533 FBLL1A6NHQ2 334 aaKnown RBP6.53□□□□□ -1.36
HDAC3-203ENST00000467533 OR10J4P0C629 311 aa6.53□□□□□ -1.36
HDAC3-203ENST00000467533 SLC38A11Q08AI6 406 aa6.53□□□□□ -1.36
HDAC3-203ENST00000467533 GUK1Q16774 197 aa6.53□□□□□ -1.36
HDAC3-203ENST00000467533 TMEM183BQ1AE95 376 aa6.53□□□□□ -1.36
HDAC3-203ENST00000467533 TMEM78Q5T7P6 136 aa6.53□□□□□ -1.36
HDAC3-203ENST00000467533 PXDC1Q5TGL8 231 aa6.53□□□□□ -1.36
HDAC3-203ENST00000467533 WDR73Q6P4I2 378 aa6.53□□□□□ -1.36
HDAC3-203ENST00000467533 TMEM183AQ8IXX5 376 aa6.53□□□□□ -1.36
HDAC3-203ENST00000467533 SLC25A29Q8N8R3 303 aa6.53□□□□□ -1.36
HDAC3-203ENST00000467533 YIPF6Q96EC8 236 aa6.53□□□□□ -1.36
HDAC3-203ENST00000467533 ZC2HC1AQ96GY0 325 aa6.53□□□□□ -1.36
HDAC3-203ENST00000467533 OR51M1Q9H341 326 aa6.53□□□□□ -1.36
HDAC3-203ENST00000467533 MTFP1Q9UDX5 166 aa6.53□□□□□ -1.36
HDAC3-203ENST00000467533 GPR132Q9UNW8 380 aa6.53□□□□□ -1.36
HDAC3-203ENST00000467533 TRGV11A0A075B6L2 103 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 IGKV2-40A0A087WW87 121 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-203ENST00000467533 FAM25AB3EWG3 89 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 FAM25CB3EWG5 89 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 FAM25GB3EWG6 89 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 DISC1C4P0D8 188 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 GOSR2O14653 212 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 SYNGR2O43760 224 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 HPGDSO60760 199 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 PITX3O75364 302 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 IGKV2D-40P01614 121 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-203ENST00000467533 NMBP08949 121 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 ANXA3P12429 323 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 KRTAP10-8P60410 259 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 RRAS2P62070 204 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-203ENST00000467533 SRPXP78539 464 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 BAK1Q16611 211 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 LCE2AQ5TA79 106 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-203ENST00000467533 ZNF546Q86UE3 836 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 C2orf50Q96LR7 162 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 URGCP-MRPS24S4R325 110 aa6.52□□□□□ -1.37
HDAC3-203ENST00000467533 C5orf51A6NDU8 294 aa6.51□□□□□ -1.37
HDAC3-203ENST00000467533 M0R2P5 195 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms