RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 HHLA3Q9XRX5 114 aa10.11□□□□□ -0.79
PDZRN3-205ENST00000466780 SPCS1Q9Y6A9 102 aa10.11□□□□□ -0.79
PDZRN3-205ENST00000466780 SMAD5-AS1Q9Y6J3 95 aa10.11□□□□□ -0.79
PDZRN3-205ENST00000466780 CSMD1Q96PZ7 3565 aa10.11□□□□□ -0.79
PDZRN3-205ENST00000466780 LINC01546A6NGU7 62 aa10.11□□□□□ -0.79
PDZRN3-205ENST00000466780 NDUFA3O95167 84 aa10.11□□□□□ -0.79
PDZRN3-205ENST00000466780 PIFOQ8TCI5 191 aa10.11□□□□□ -0.79
PDZRN3-205ENST00000466780 ZMAT4Q9H898 229 aa10.11□□□□□ -0.79
PDZRN3-205ENST00000466780 ODF1Q14990 250 aa10.1□□□□□ -0.79
PDZRN3-205ENST00000466780 NPBQ8NG41 125 aa10.1□□□□□ -0.79
PDZRN3-205ENST00000466780 ZNF48Q96MX3 618 aaPredicted RBP10.1□□□□□ -0.79
PDZRN3-205ENST00000466780 LEPP41159 167 aa10.1□□□□□ -0.79
PDZRN3-205ENST00000466780 FXYD2P54710 66 aa10.1□□□□□ -0.79
PDZRN3-205ENST00000466780 NDPQ00604 133 aa10.1□□□□□ -0.79
PDZRN3-205ENST00000466780 MAP1LC3AQ9H492 121 aa10.1□□□□□ -0.79
PDZRN3-205ENST00000466780 RPL7P18124 248 aaKnown RBP10.09□□□□□ -0.79
PDZRN3-205ENST00000466780 BMI1P35226 326 aa10.09□□□□□ -0.79
PDZRN3-205ENST00000466780 ZNF562Q6V9R5 426 aa10.09□□□□□ -0.79
PDZRN3-205ENST00000466780 S100A7AQ86SG5 101 aa10.09□□□□□ -0.79
PDZRN3-205ENST00000466780 OR5A1Q8NGJ0 315 aa10.09□□□□□ -0.79
PDZRN3-205ENST00000466780 CNFNQ9BYD5 112 aa10.09□□□□□ -0.79
PDZRN3-205ENST00000466780 B9A039 149 aa10.09□□□□□ -0.79
PDZRN3-205ENST00000466780 GATA1P15976 413 aaPredicted RBP10.09□□□□□ -0.79
PDZRN3-205ENST00000466780 C5orf64Q2M2E5 130 aa10.09□□□□□ -0.79
PDZRN3-205ENST00000466780 C21orf62Q9NYP8 219 aa10.09□□□□□ -0.79
PDZRN3-205ENST00000466780 DPM3Q9P2X0 92 aa10.09□□□□□ -0.79
PDZRN3-205ENST00000466780 ORM1P02763 201 aa10.08□□□□□ -0.8
PDZRN3-205ENST00000466780 EVI2AP22794 236 aa10.08□□□□□ -0.8
PDZRN3-205ENST00000466780 GCSHP23434 173 aa10.08□□□□□ -0.8
PDZRN3-205ENST00000466780 FCER1GP30273 86 aa10.08□□□□□ -0.8
PDZRN3-205ENST00000466780 FOXC1Q12948 553 aa10.08□□□□□ -0.8
PDZRN3-205ENST00000466780 NBASA2RRP1 2371 aa10.08□□□□□ -0.8
PDZRN3-205ENST00000466780 FBLL1A6NHQ2 334 aaKnown RBP10.08□□□□□ -0.8
PDZRN3-205ENST00000466780 TMEM238C9JI98 176 aa10.08□□□□□ -0.8
PDZRN3-205ENST00000466780 TNFRSF6BO95407 300 aa10.08□□□□□ -0.8
PDZRN3-205ENST00000466780 KLRD1Q13241 179 aa10.08□□□□□ -0.8
PDZRN3-205ENST00000466780 SAMD5Q5TGI4 173 aa10.08□□□□□ -0.8
PDZRN3-205ENST00000466780 LY6G5BQ8NDX9 201 aa10.08□□□□□ -0.8
PDZRN3-205ENST00000466780 DCHS2Q6V1P9 2916 aa10.08□□□□□ -0.8
PDZRN3-205ENST00000466780 IGHV3OR16-8A0A075B7F1 116 aa10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 SMIM13P0DJ93 91 aa10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 HIGD1BQ9P298 99 aa10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 ABCA4P78363 2273 aa10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 K7ERJ3 54 aa10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 CTSGP08311 255 aa10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 FABP2P12104 132 aa10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 PPIFP30405 207 aaKnown RBP10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 CEACAM3P40198 252 aa10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 SRSF2Q01130 221 aaKnown RBP10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 ERCC8Q13216 396 aa10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 HES1Q14469 280 aa10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 DYNAPQ8N1N2 210 aa10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 OR11H6Q8NGC7 330 aa10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 CHAC1Q9BUX1 264 aa10.07□□□□□ -0.8
PDZRN3-205ENST00000466780 PRAC2D3DTV9 90 aa10.06□□□□□ -0.8
PDZRN3-205ENST00000466780 PRSS1P07477 247 aa10.06□□□□□ -0.8
PDZRN3-205ENST00000466780 TTC9CQ8N5M4 171 aa10.06□□□□□ -0.8
PDZRN3-205ENST00000466780 PHLDA1Q8WV24 401 aaPredicted RBP10.06□□□□□ -0.8
PDZRN3-205ENST00000466780 ARPC1AQ92747 370 aa10.06□□□□□ -0.8
PDZRN3-205ENST00000466780 NXT2Q9NPJ8 142 aaKnown RBP10.06□□□□□ -0.8
PDZRN3-205ENST00000466780 FABP5P3A8MUU1 101 aa10.06□□□□□ -0.8
PDZRN3-205ENST00000466780 IGKCP01834 107 aa10.06□□□□□ -0.8
PDZRN3-205ENST00000466780 CD3EP07766 207 aa10.06□□□□□ -0.8
PDZRN3-205ENST00000466780 GTSCR1Q86UQ5 136 aa10.06□□□□□ -0.8
PDZRN3-205ENST00000466780 TMEM158Q8WZ71 300 aa10.06□□□□□ -0.8
PDZRN3-205ENST00000466780 WNK2Q9Y3S1 2297 aa10.05□□□□□ -0.8
PDZRN3-205ENST00000466780 PTPRQQ9UMZ3 2332 aa10.05□□□□□ -0.8
PDZRN3-205ENST00000466780 IGLV2-18A0A075B6J9 118 aa10.05□□□□□ -0.8
PDZRN3-205ENST00000466780 TRBV25-1A0A075B6N4 114 aa10.05□□□□□ -0.8
PDZRN3-205ENST00000466780 IGHV3-35A0A0C4DH35 117 aa10.05□□□□□ -0.8
PDZRN3-205ENST00000466780 ZNF672Q499Z4 452 aaPredicted RBP10.05□□□□□ -0.8
PDZRN3-205ENST00000466780 FOXC2Q99958 501 aa10.05□□□□□ -0.8
PDZRN3-205ENST00000466780 LY6HO94772 140 aa10.05□□□□□ -0.8
PDZRN3-205ENST00000466780 NBL1P41271 181 aa10.05□□□□□ -0.8
PDZRN3-205ENST00000466780 LINC01559Q495D7 138 aa10.05□□□□□ -0.8
PDZRN3-205ENST00000466780 DTX2Q86UW9 622 aa10.05□□□□□ -0.8
PDZRN3-205ENST00000466780 LINC01560Q8TB33 94 aa10.05□□□□□ -0.8
PDZRN3-205ENST00000466780 LRBAP50851 2863 aa10.04□□□□□ -0.8
PDZRN3-205ENST00000466780 RELNP78509 3460 aa10.04□□□□□ -0.8
PDZRN3-205ENST00000466780 ODF3BA8MYP8 253 aa10.04□□□□□ -0.8
PDZRN3-205ENST00000466780 K7EMI3 77 aa10.04□□□□□ -0.8
PDZRN3-205ENST00000466780 PSMG4Q5JS54 123 aa10.04□□□□□ -0.8
PDZRN3-205ENST00000466780 ZC2HC1BQ5TFG8 222 aa10.04□□□□□ -0.8
PDZRN3-205ENST00000466780 IL17RELQ6ZVW7 336 aa10.04□□□□□ -0.8
PDZRN3-205ENST00000466780 C11orf21Q9P2W6 132 aa10.04□□□□□ -0.8
PDZRN3-205ENST00000466780 ANKHD1Q8IWZ3 2542 aaKnown RBP10.03□□□□□ -0.8
PDZRN3-205ENST00000466780 IGKV3D-20A0A0C4DH25 116 aa10.03□□□□□ -0.8
PDZRN3-205ENST00000466780 TMEM8BA6NDV4 472 aa10.03□□□□□ -0.8
PDZRN3-205ENST00000466780 NCBP2LA6PVI3 153 aaKnown RBP10.03□□□□□ -0.8
PDZRN3-205ENST00000466780 TRGV3P03979 118 aa10.03□□□□□ -0.8
PDZRN3-205ENST00000466780 SMIM17P0DL12 118 aa10.03□□□□□ -0.8
PDZRN3-205ENST00000466780 RNF182Q8N6D2 247 aa10.03□□□□□ -0.8
PDZRN3-205ENST00000466780 Q8N8P6 123 aa10.03□□□□□ -0.8
PDZRN3-205ENST00000466780 TEX48A0A1B0GUV7 120 aa10.03□□□□□ -0.8
PDZRN3-205ENST00000466780 FAM90A27PA6NNH2 459 aa10.03□□□□□ -0.8
PDZRN3-205ENST00000466780 DPM2O94777 84 aa10.03□□□□□ -0.8
PDZRN3-205ENST00000466780 TM2D2Q9BX73 214 aa10.03□□□□□ -0.8
PDZRN3-205ENST00000466780 CEND1Q8N111 149 aa10.02□□□□□ -0.81
PDZRN3-205ENST00000466780 MAPKAPK5-AS1Q8N8E1 139 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms