RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 AP1S3Q96PC3 154 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 FKBP11Q9NYL4 201 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 SIP14410 1827 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 SPTBP11277 2137 aa0.43□□□□□ -2.34
SSB-207ENST00000465871 UBR2Q8IWV8 1755 aa0.42□□□□□ -2.34
SSB-207ENST00000465871 SYNMO15061 1565 aa0.42□□□□□ -2.34
SSB-207ENST00000465871 TRAPPC8Q9Y2L5 1435 aa0.42□□□□□ -2.34
SSB-207ENST00000465871 TRAV13-1A0A0B4J241 112 aa0.42□□□□□ -2.34
SSB-207ENST00000465871 BBIP1A8MTZ0 92 aa0.42□□□□□ -2.34
SSB-207ENST00000465871 H3BMG7 143 aa0.42□□□□□ -2.34
SSB-207ENST00000465871 SULT1C4O75897 302 aa0.42□□□□□ -2.34
SSB-207ENST00000465871 KDELR1P24390 212 aa0.42□□□□□ -2.34
SSB-207ENST00000465871 S100GP29377 79 aa0.42□□□□□ -2.34
SSB-207ENST00000465871 RPL37AP61513 92 aaKnown RBP0.42□□□□□ -2.34
SSB-207ENST00000465871 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
SSB-207ENST00000465871 SPINK9Q5DT21 86 aa0.42□□□□□ -2.34
SSB-207ENST00000465871 SPATA8Q6RVD6 105 aa0.42□□□□□ -2.34
SSB-207ENST00000465871 C3orf62Q6ZUJ4 267 aa0.42□□□□□ -2.34
SSB-207ENST00000465871 CIB3Q96Q77 187 aaPredicted RBP0.42□□□□□ -2.34
SSB-207ENST00000465871 LXNQ9BS40 222 aa0.42□□□□□ -2.34
SSB-207ENST00000465871 MUC5BQ9HC84 5762 aaPredicted RBP0.42□□□□□ -2.34
SSB-207ENST00000465871 FANCMQ8IYD8 2048 aa0.42□□□□□ -2.34
SSB-207ENST00000465871 COL24A1Q17RW2 1714 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 ERBINQ96RT1 1412 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 MYLKQ15746 1914 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.41□□□□□ -2.34
SSB-207ENST00000465871 A0A0J9YY99 117 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 TRBV27A0A0K0K1C4 114 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 ARL5CA6NH57 179 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 M0QZK8 103 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 PGRMC1O00264 195 aaKnown RBP0.41□□□□□ -2.34
SSB-207ENST00000465871 FAM107AO95990 144 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 RPL7P18124 248 aaKnown RBP0.41□□□□□ -2.34
SSB-207ENST00000465871 SPINT3P49223 89 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 SNRPD3P62318 126 aaKnown RBP0.41□□□□□ -2.34
SSB-207ENST00000465871 SAMD13Q5VXD3 122 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 TMEM229BQ8NBD8 167 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 TMEM35BQ8NCS4 154 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 CCL4L1Q8NHW4 92 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 THEM6Q8WUY1 208 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 CCL19Q99731 98 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 CENPHQ9H3R5 247 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 MED31Q9Y3C7 131 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 ZDBF2Q9HCK1 2354 aa0.41□□□□□ -2.34
SSB-207ENST00000465871 PHRF1Q9P1Y6 1649 aaKnown RBP0.41□□□□□ -2.34
SSB-207ENST00000465871 FRMPD1Q5SYB0 1578 aa0.4□□□□□ -2.34
SSB-207ENST00000465871 MUC4Q99102 2169 aa0.4□□□□□ -2.34
SSB-207ENST00000465871 USP24Q9UPU5 2620 aa0.4□□□□□ -2.34
SSB-207ENST00000465871 BCL9O00512 1426 aa0.4□□□□□ -2.34
SSB-207ENST00000465871 KIAA1107Q9UPP5 1409 aa0.4□□□□□ -2.34
SSB-207ENST00000465871 ZFC3H1O60293 1989 aaKnown RBP0.4□□□□□ -2.35
SSB-207ENST00000465871 LOC107986453A0A1B0GWG9 222 aa0.4□□□□□ -2.35
SSB-207ENST00000465871 SAA1P0DJI8 122 aaPredicted RBP0.4□□□□□ -2.35
SSB-207ENST00000465871 PDE6GP18545 87 aa0.4□□□□□ -2.35
SSB-207ENST00000465871 CRYGSP22914 178 aa0.4□□□□□ -2.35
SSB-207ENST00000465871 POLR2HP52434 150 aaKnown RBP0.4□□□□□ -2.35
SSB-207ENST00000465871 FOXA3P55318 350 aaPredicted RBP0.4□□□□□ -2.35
SSB-207ENST00000465871 QRFPP83859 136 aa0.4□□□□□ -2.35
SSB-207ENST00000465871 C6orf52Q5T4I8 152 aa0.4□□□□□ -2.35
SSB-207ENST00000465871 SMIM15Q7Z3B0 74 aa0.4□□□□□ -2.35
SSB-207ENST00000465871 BRK1Q8WUW1 75 aa0.4□□□□□ -2.35
SSB-207ENST00000465871 NABP2Q9BQ15 211 aa0.4□□□□□ -2.35
SSB-207ENST00000465871 LPAR5Q9H1C0 372 aa0.4□□□□□ -2.35
SSB-207ENST00000465871 ZNF462Q96JM2 2506 aa0.4□□□□□ -2.35
SSB-207ENST00000465871 ASH1LQ9NR48 2969 aaKnown RBP0.4□□□□□ -2.35
SSB-207ENST00000465871 NISCHQ9Y2I1 1504 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 TRPM1Q7Z4N2 1603 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 A0A1W2PPB8 328 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 A0A1W2PRS3 328 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 KIR3DP1A8MWS1 328 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 EDF1O60869 148 aaKnown RBP0.39□□□□□ -2.35
SSB-207ENST00000465871 SLC25A4P12235 298 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 RPS3P23396 243 aaKnown RBP eCLIP0.39□□□□□ -2.35
SSB-207ENST00000465871 SRP9P49458 86 aaKnown RBP0.39□□□□□ -2.35
SSB-207ENST00000465871 GTF2A1P52655 376 aaPredicted RBP0.39□□□□□ -2.35
SSB-207ENST00000465871 ZNF137PP52743 207 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 FXYD6P3P58550 94 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 LSM3P62310 102 aaKnown RBP0.39□□□□□ -2.35
SSB-207ENST00000465871 BLCAPP62952 87 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 TFAMQ00059 246 aaKnown RBP0.39□□□□□ -2.35
SSB-207ENST00000465871 TMEM128Q5BJH2 165 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 CSAG1Q6PB30 78 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 Q6ZS92 163 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 C10orf111Q8N326 155 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 TCTEX1D1Q8N7M0 179 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.39□□□□□ -2.35
SSB-207ENST00000465871 MORN4Q8NDC4 146 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 OR9Q1Q8NGQ5 310 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 PLAC4Q8WY50 150 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 CCDC115Q96NT0 180 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 CBLN4Q9NTU7 201 aa0.39□□□□□ -2.35
SSB-207ENST00000465871 DSPPQ9NZW4 1301 aa0.38□□□□□ -2.35
SSB-207ENST00000465871 DLC1Q96QB1 1528 aa0.38□□□□□ -2.35
SSB-207ENST00000465871 TANC2Q9HCD6 1990 aa0.38□□□□□ -2.35
SSB-207ENST00000465871 PIK3C2AO00443 1686 aa0.38□□□□□ -2.35
SSB-207ENST00000465871 A0A0D9SG42 100 aa0.38□□□□□ -2.35
SSB-207ENST00000465871 LOC107984640A0A0U1RRK4 108 aa0.38□□□□□ -2.35
SSB-207ENST00000465871 TMEM189A5PLL7 270 aa0.38□□□□□ -2.35
SSB-207ENST00000465871 CDC42EP2O14613 210 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms