RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 TMEM78Q5T7P6 136 aa14.72□□□□□ -0.05
NUP43-205ENST00000463048 SGK494Q96LW2 274 aa14.72□□□□□ -0.05
NUP43-205ENST00000463048 A0A0J9YWU9 116 aa14.71□□□□□ -0.05
NUP43-205ENST00000463048 CRXO43186 299 aaPredicted RBP14.71□□□□□ -0.05
NUP43-205ENST00000463048 INSP01308 110 aa14.71□□□□□ -0.05
NUP43-205ENST00000463048 IFNA7P01567 189 aa14.71□□□□□ -0.05
NUP43-205ENST00000463048 RAB5CP51148 216 aa14.71□□□□□ -0.05
NUP43-205ENST00000463048 CST9LP1Q5W188 147 aa14.71□□□□□ -0.05
NUP43-205ENST00000463048 IGF2BP2-AS1Q96M15 143 aa14.71□□□□□ -0.05
NUP43-205ENST00000463048 TMEM208Q9BTX3 173 aa14.71□□□□□ -0.05
NUP43-205ENST00000463048 FAM74A7A6NL05 159 aa14.7□□□□□ -0.06
NUP43-205ENST00000463048 ZNF705EA8MWA4 302 aaPredicted RBP14.7□□□□□ -0.06
NUP43-205ENST00000463048 LEPP41159 167 aa14.7□□□□□ -0.06
NUP43-205ENST00000463048 CDKN1BP46527 198 aa14.7□□□□□ -0.06
NUP43-205ENST00000463048 C9orf47Q6ZRZ4 202 aa14.7□□□□□ -0.06
NUP43-205ENST00000463048 C1orf158Q8N1D5 194 aa14.7□□□□□ -0.06
NUP43-205ENST00000463048 LINC00477Q96M19 166 aa14.7□□□□□ -0.06
NUP43-205ENST00000463048 GOLT1BQ9Y3E0 138 aa14.7□□□□□ -0.06
NUP43-205ENST00000463048 TRAV8-1A0A0A6YYK1 113 aa14.69□□□□□ -0.06
NUP43-205ENST00000463048 A0A1W2PRE2 83 aa14.69□□□□□ -0.06
NUP43-205ENST00000463048 PAGE4O60829 102 aa14.69□□□□□ -0.06
NUP43-205ENST00000463048 AMBPP02760 352 aa14.69□□□□□ -0.06
NUP43-205ENST00000463048 TSPOP30536 169 aa14.69□□□□□ -0.06
NUP43-205ENST00000463048 CCL20P78556 96 aa14.69□□□□□ -0.06
NUP43-205ENST00000463048 C5orf17Q8NAS9 161 aa14.69□□□□□ -0.06
NUP43-205ENST00000463048 X6R8D5 127 aa14.69□□□□□ -0.06
NUP43-205ENST00000463048 PRM2P04554 102 aa14.68□□□□□ -0.06
NUP43-205ENST00000463048 RBMY1A1P0DJD3 496 aaKnown RBP14.68□□□□□ -0.06
NUP43-205ENST00000463048 RBMY1CP0DJD4 496 aa14.68□□□□□ -0.06
NUP43-205ENST00000463048 ZNF138P52744 262 aa14.68□□□□□ -0.06
NUP43-205ENST00000463048 RBMY1FQ15415 496 aaKnown RBP14.68□□□□□ -0.06
NUP43-205ENST00000463048 GFI1BQ5VTD9 330 aa14.68□□□□□ -0.06
NUP43-205ENST00000463048 EPDR1Q9UM22 224 aa14.68□□□□□ -0.06
NUP43-205ENST00000463048 TRAV12-3A0A0B4J271 114 aa14.67□□□□□ -0.06
NUP43-205ENST00000463048 IGHV4-28A0A0C4DH34 117 aa14.67□□□□□ -0.06
NUP43-205ENST00000463048 TCRAP04437 139 aa14.67□□□□□ -0.06
NUP43-205ENST00000463048 HTN1P15515 57 aa14.67□□□□□ -0.06
NUP43-205ENST00000463048 RNASE4P34096 147 aaKnown RBP14.67□□□□□ -0.06
NUP43-205ENST00000463048 ATP5G3P48201 142 aa14.67□□□□□ -0.06
NUP43-205ENST00000463048 ZNF492Q9P255 531 aa14.67□□□□□ -0.06
NUP43-205ENST00000463048 GNG13Q9P2W3 67 aa14.67□□□□□ -0.06
NUP43-205ENST00000463048 RBAKDNA6NC62 111 aa14.66□□□□□ -0.06
NUP43-205ENST00000463048 BTN1A1Q13410 526 aa14.66□□□□□ -0.06
NUP43-205ENST00000463048 ZNF705AQ6ZN79 300 aaPredicted RBP14.66□□□□□ -0.06
NUP43-205ENST00000463048 ODF3Q96PU9 254 aa14.66□□□□□ -0.06
NUP43-205ENST00000463048 LINC01587Q99440 93 aa14.66□□□□□ -0.06
NUP43-205ENST00000463048 EDA2RQ9HAV5 297 aa14.66□□□□□ -0.06
NUP43-205ENST00000463048 ZNF705GA8MUZ8 300 aaPredicted RBP14.65□□□□□ -0.06
NUP43-205ENST00000463048 GPX1P07203 203 aa14.65□□□□□ -0.06
NUP43-205ENST00000463048 EMP1P54849 157 aa14.65□□□□□ -0.06
NUP43-205ENST00000463048 PRR9Q5T870 116 aa14.65□□□□□ -0.06
NUP43-205ENST00000463048 LINC00479Q96M42 142 aa14.65□□□□□ -0.06
NUP43-205ENST00000463048 WWC2-AS2Q96NR7 200 aa14.65□□□□□ -0.06
NUP43-205ENST00000463048 TRAV34A0A0B4J273 112 aa14.64□□□□□ -0.07
NUP43-205ENST00000463048 TEX46H3BTG2 121 aa14.64□□□□□ -0.07
NUP43-205ENST00000463048 HBE1P02100 147 aa14.64□□□□□ -0.07
NUP43-205ENST00000463048 CYB561D1Q8N8Q1 229 aa14.64□□□□□ -0.07
NUP43-205ENST00000463048 Q8NAQ8 132 aa14.64□□□□□ -0.07
NUP43-205ENST00000463048 FAM19A4Q96LR4 140 aa14.64□□□□□ -0.07
NUP43-205ENST00000463048 STAB2Q8WWQ8 2551 aa14.64□□□□□ -0.07
NUP43-205ENST00000463048 K7EQM0 130 aa14.63□□□□□ -0.07
NUP43-205ENST00000463048 PEX7O00628 323 aa14.63□□□□□ -0.07
NUP43-205ENST00000463048 MIFP14174 115 aa14.63□□□□□ -0.07
NUP43-205ENST00000463048 Q6ZQT7 251 aa14.63□□□□□ -0.07
NUP43-205ENST00000463048 PRNTQ86SH4 94 aa14.63□□□□□ -0.07
NUP43-205ENST00000463048 ZFAND2AQ8N6M9 145 aa14.63□□□□□ -0.07
NUP43-205ENST00000463048 ATG101Q9BSB4 218 aa14.63□□□□□ -0.07
NUP43-205ENST00000463048 TRAV1-1A0A0B4J248 108 aa14.62□□□□□ -0.07
NUP43-205ENST00000463048 C7orf71A4D174 169 aa14.62□□□□□ -0.07
NUP43-205ENST00000463048 F6UZH7 168 aa14.62□□□□□ -0.07
NUP43-205ENST00000463048 ARL6IP6Q8N6S5 226 aa14.62□□□□□ -0.07
NUP43-205ENST00000463048 NKX6-2Q9C056 277 aaPredicted RBP14.62□□□□□ -0.07
NUP43-205ENST00000463048 PSG8Q9UQ74 426 aa14.62□□□□□ -0.07
NUP43-205ENST00000463048 CRISP2P16562 243 aa14.61□□□□□ -0.07
NUP43-205ENST00000463048 PPT1P50897 306 aa14.61□□□□□ -0.07
NUP43-205ENST00000463048 RRN3P1Q2M238 152 aa14.61□□□□□ -0.07
NUP43-205ENST00000463048 PCNPQ8WW12 178 aaKnown RBP14.61□□□□□ -0.07
NUP43-205ENST00000463048 TVP23CQ96ET8 276 aa14.61□□□□□ -0.07
NUP43-205ENST00000463048 NIPSNAP3BQ9BS92 247 aa14.61□□□□□ -0.07
NUP43-205ENST00000463048 LOC102723971A0A1B0GUV8 181 aa14.6□□□□□ -0.07
NUP43-205ENST00000463048 SERTM2A0A1B0GWG4 89 aa14.6□□□□□ -0.07
NUP43-205ENST00000463048 KLLNB2CW77 178 aa14.6□□□□□ -0.07
NUP43-205ENST00000463048 C11orf94C9JXX5 98 aa14.6□□□□□ -0.07
NUP43-205ENST00000463048 AZU1P20160 251 aa14.6□□□□□ -0.07
NUP43-205ENST00000463048 BLOC1S1P78537 153 aa14.6□□□□□ -0.07
NUP43-205ENST00000463048 FLI1Q01543 452 aaPredicted RBP14.6□□□□□ -0.07
NUP43-205ENST00000463048 CCDC28AQ8IWP9 274 aa14.6□□□□□ -0.07
NUP43-205ENST00000463048 C8orf49Q96NF6 230 aa14.6□□□□□ -0.07
NUP43-205ENST00000463048 TREM1Q9NP99 234 aa14.6□□□□□ -0.07
NUP43-205ENST00000463048 MANBALQ9NQG1 85 aa14.6□□□□□ -0.07
NUP43-205ENST00000463048 IGLV2-11P01706 119 aa14.59□□□□□ -0.07
NUP43-205ENST00000463048 TMEM256Q8N2U0 113 aa14.59□□□□□ -0.07
NUP43-205ENST00000463048 NEU1Q99519 415 aa14.59□□□□□ -0.07
NUP43-205ENST00000463048 NDFIP1Q9BT67 221 aa14.59□□□□□ -0.07
NUP43-205ENST00000463048 ARL2-SNX15V9GYD0 113 aa14.59□□□□□ -0.07
NUP43-205ENST00000463048 SCO2A0A1W2PP80 73 aa14.58□□□□□ -0.08
NUP43-205ENST00000463048 SMIM9A6NGZ8 99 aa14.58□□□□□ -0.08
NUP43-205ENST00000463048 H7BYZ3 331 aa14.58□□□□□ -0.08
NUP43-205ENST00000463048 AKR1C3P42330 323 aa14.58□□□□□ -0.08
NUP43-205ENST00000463048 PMS2P11Q13670 270 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms