RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 GAGE12FP0CL80 117 aa9.09□□□□□ -0.96
TRAPPC3-205ENST00000462715 GAGE12GP0CL81 117 aa9.09□□□□□ -0.96
TRAPPC3-205ENST00000462715 GAGE12IP0CL82 117 aa9.09□□□□□ -0.96
TRAPPC3-205ENST00000462715 NMUP48645 174 aa9.09□□□□□ -0.96
TRAPPC3-205ENST00000462715 GAGE4Q13068 117 aa9.09□□□□□ -0.96
TRAPPC3-205ENST00000462715 LYRM7Q5U5X0 104 aa9.09□□□□□ -0.96
TRAPPC3-205ENST00000462715 WFDC11Q8NEX6 87 aa9.09□□□□□ -0.96
TRAPPC3-205ENST00000462715 OR8A1Q8NGG7 326 aa9.09□□□□□ -0.96
TRAPPC3-205ENST00000462715 Q8TCH9 128 aa9.09□□□□□ -0.96
TRAPPC3-205ENST00000462715 LINC00479Q96M42 142 aa9.09□□□□□ -0.96
TRAPPC3-205ENST00000462715 NHP2Q9NX24 153 aaKnown RBP9.09□□□□□ -0.96
TRAPPC3-205ENST00000462715 PRNDQ9UKY0 176 aa9.09□□□□□ -0.96
TRAPPC3-205ENST00000462715 SELENOKQ9Y6D0 94 aa9.09□□□□□ -0.96
TRAPPC3-205ENST00000462715 ITPR3Q14573 2671 aa9.08□□□□□ -0.96
TRAPPC3-205ENST00000462715 GATA3P23771 443 aa9.08□□□□□ -0.96
TRAPPC3-205ENST00000462715 CFAP126Q5VTH2 177 aa9.08□□□□□ -0.96
TRAPPC3-205ENST00000462715 S1PR3Q99500 378 aa9.08□□□□□ -0.96
TRAPPC3-205ENST00000462715 TANC2Q9HCD6 1990 aa9.08□□□□□ -0.96
TRAPPC3-205ENST00000462715 IGHV4-30-2A0A087WSY4 118 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 M0QXV9 152 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 ZNF138P52744 262 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 XGP55808 180 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 PAX8Q06710 450 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 ZNF562Q6V9R5 426 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 RNF7Q9UBF6 113 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 CENPVL3A0A0U1RRI6 287 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 LINC01546A6NGU7 62 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 NPIPB5A8MRT5 1133 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 TMEM178BH3BS89 294 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 SPINT2O43291 252 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 WDR86Q86TI4 376 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 FXYD5Q96DB9 178 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 PRELID3AQ96N28 172 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 CITED1Q99966 193 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 BPESC1Q9GZL8 116 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 UFC1Q9Y3C8 167 aa9.07□□□□□ -0.96
TRAPPC3-205ENST00000462715 TRBV25-1A0A075B6N4 114 aa9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 B5MCH6 92 aa9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 RHODO00212 210 aa9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 KLF17Q5JT82 389 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 PDPNQ86YL7 162 aa9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 TMEM158Q8WZ71 300 aa9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 DLX4Q92988 240 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 SPXQ9BT56 116 aa9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 INS-IGF2F8WCM5 200 aa9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 MOSP00540 346 aa9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 ASIPP42127 132 aa9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 PRCDQ00LT1 54 aa9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 CD69Q07108 199 aa9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 UBALD1Q8TB05 177 aa9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 DDB2Q92466 427 aa9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 IFI27L2Q9H2X8 130 aa9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 DYSFO75923 2080 aa9.06□□□□□ -0.96
TRAPPC3-205ENST00000462715 COX7A2P2O60397 106 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 CSN3P07498 182 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 CFHR2P36980 270 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 ZNF137PP52743 207 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 C10orf113Q5VZT2 155 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 ZNF826PQ6ZT77 177 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 HIF1ANQ9NWT6 349 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 FLNAP21333 2647 aaKnown RBP9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 IGKV1OR2-108A0A075B7D4 117 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 RNF223E7ERA6 249 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 FSTL3O95633 263 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 SLC25A5P05141 298 aaKnown RBP9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 INSL3P51460 131 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 MOB3BQ86TA1 216 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 SBSPONQ8IVN8 264 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 C11orf53Q8IXP5 236 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 TMEM116Q8NCL8 245 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 OSR1Q8TAX0 266 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 FAM234AQ9H0X4 552 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 F11RQ9Y624 299 aaKnown RBP9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 CELSR1Q9NYQ6 3014 aa9.05□□□□□ -0.96
TRAPPC3-205ENST00000462715 TEN1Q86WV5 123 aa9.04□□□□□ -0.96
TRAPPC3-205ENST00000462715 TMEM126AQ9H061 195 aa9.04□□□□□ -0.96
TRAPPC3-205ENST00000462715 C15orf65H3BRN8 121 aa9.04□□□□□ -0.96
TRAPPC3-205ENST00000462715 ATP5LO75964 103 aa9.04□□□□□ -0.96
TRAPPC3-205ENST00000462715 LHBP01229 141 aa9.04□□□□□ -0.96
TRAPPC3-205ENST00000462715 ZNF688P0C7X2 276 aa9.04□□□□□ -0.96
TRAPPC3-205ENST00000462715 LOXL1Q08397 574 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC3-205ENST00000462715 TMEM155Q4W5P6 130 aa9.04□□□□□ -0.96
TRAPPC3-205ENST00000462715 HHLA3Q9XRX5 114 aa9.04□□□□□ -0.96
TRAPPC3-205ENST00000462715 TRAV3A0A0B4J244 114 aa9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 FABP5P3A8MUU1 101 aa9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 SRRM5B3KS81 715 aa9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 K7ERJ3 54 aa9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 PROP1O75360 226 aa9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 NHLRC4P0CG21 123 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 CD24P25063 80 aa9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 IFI27P40305 119 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 LINC00322Q6ZN03 302 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 FAM90A1Q86YD7 464 aa9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 MAP1LC3AQ9H492 121 aa9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 RAB9BQ9NP90 201 aa9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 IGHV4-61A0A0C4DH41 118 aa9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 PSPNO60542 156 aa9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 ORMDL3Q8N138 153 aa9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 THAP8Q8NA92 274 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms