RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 MORN3Q6PF18 240 aaPredicted RBP7.48□□□□□ -1.21
UPF2-204ENST00000460569 AMTNQ6UX39 209 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 C9orf47Q6ZRZ4 202 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 Q8TAT8 98 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 HIST1H2BAQ96A08 127 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 LINC00477Q96M19 166 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 FAM210AQ96ND0 272 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 CLUHP3Q96NS8 147 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 RARRES2Q99969 163 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 TXNDC17Q9BRA2 123 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 EIF5A2Q9GZV4 153 aaKnown RBP7.48□□□□□ -1.21
UPF2-204ENST00000460569 AGPAT4-IT1Q9H0P7 198 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 SLC35B3Q9H1N7 401 aa7.48□□□□□ -1.21
UPF2-204ENST00000460569 KIR2DL5BA0A0G2JN68 375 aa7.47□□□□□ -1.21
UPF2-204ENST00000460569 KIR2DL5BA0A0G2JPC4 375 aa7.47□□□□□ -1.21
UPF2-204ENST00000460569 M0R2Z0 102 aa7.47□□□□□ -1.21
UPF2-204ENST00000460569 RGS13O14921 159 aa7.47□□□□□ -1.21
UPF2-204ENST00000460569 CA1P00915 261 aaPredicted RBP7.47□□□□□ -1.21
UPF2-204ENST00000460569 CT45A10P0DMU9 189 aa7.47□□□□□ -1.21
UPF2-204ENST00000460569 ZNF138P52744 262 aa7.47□□□□□ -1.21
UPF2-204ENST00000460569 UBE2G1P62253 170 aa7.47□□□□□ -1.21
UPF2-204ENST00000460569 SPINK13Q1W4C9 94 aa7.47□□□□□ -1.21
UPF2-204ENST00000460569 ZNF506Q5JVG8 444 aa7.47□□□□□ -1.21
UPF2-204ENST00000460569 LINC00322Q6ZN03 302 aaPredicted RBP7.47□□□□□ -1.21
UPF2-204ENST00000460569 KIR2DL5AQ8N109 375 aa7.47□□□□□ -1.21
UPF2-204ENST00000460569 KIR2DL5BQ8NHK3 375 aa7.47□□□□□ -1.21
UPF2-204ENST00000460569 SGK494Q96LW2 274 aa7.47□□□□□ -1.21
UPF2-204ENST00000460569 ASCL2Q99929 193 aa7.47□□□□□ -1.21
UPF2-204ENST00000460569 CSTL1Q9H114 145 aa7.47□□□□□ -1.21
UPF2-204ENST00000460569 MEGF8Q7Z7M0 2845 aa7.47□□□□□ -1.21
UPF2-204ENST00000460569 DNAH3Q8TD57 4116 aa7.46□□□□□ -1.21
UPF2-204ENST00000460569 TRAV34A0A0B4J273 112 aa7.46□□□□□ -1.22
UPF2-204ENST00000460569 J3KRW8 73 aa7.46□□□□□ -1.22
UPF2-204ENST00000460569 PDE6DO43924 150 aa7.46□□□□□ -1.22
UPF2-204ENST00000460569 LEPP41159 167 aa7.46□□□□□ -1.22
UPF2-204ENST00000460569 FLI1Q01543 452 aaPredicted RBP7.46□□□□□ -1.22
UPF2-204ENST00000460569 TMEM75Q8N9X5 138 aa7.46□□□□□ -1.22
UPF2-204ENST00000460569 C11orf52Q96A22 123 aa7.46□□□□□ -1.22
UPF2-204ENST00000460569 LINC00479Q96M42 142 aa7.46□□□□□ -1.22
UPF2-204ENST00000460569 ODF3Q96PU9 254 aa7.46□□□□□ -1.22
UPF2-204ENST00000460569 C1QTNF4Q9BXJ3 329 aa7.46□□□□□ -1.22
UPF2-204ENST00000460569 ZNF492Q9P255 531 aa7.46□□□□□ -1.22
UPF2-204ENST00000460569 XCL2Q9UBD3 114 aa7.46□□□□□ -1.22
UPF2-204ENST00000460569 PSG8Q9UQ74 426 aa7.46□□□□□ -1.22
UPF2-204ENST00000460569 TRAV12-2A0A075B6T6 113 aa7.45□□□□□ -1.22
UPF2-204ENST00000460569 FBLL1A6NHQ2 334 aaKnown RBP7.45□□□□□ -1.22
UPF2-204ENST00000460569 AMBPP02760 352 aa7.45□□□□□ -1.22
UPF2-204ENST00000460569 TSPOP30536 169 aa7.45□□□□□ -1.22
UPF2-204ENST00000460569 CDKN1BP46527 198 aa7.45□□□□□ -1.22
UPF2-204ENST00000460569 DEFB135Q30KP9 77 aa7.45□□□□□ -1.22
UPF2-204ENST00000460569 PRNTQ86SH4 94 aa7.45□□□□□ -1.22
UPF2-204ENST00000460569 Q86TA4 180 aa7.45□□□□□ -1.22
UPF2-204ENST00000460569 C2CD4CQ8TF44 421 aa7.45□□□□□ -1.22
UPF2-204ENST00000460569 FMC1Q96HJ9 113 aa7.45□□□□□ -1.22
UPF2-204ENST00000460569 NDFIP1Q9BT67 221 aa7.45□□□□□ -1.22
UPF2-204ENST00000460569 MED9Q9NWA0 146 aa7.45□□□□□ -1.22
UPF2-204ENST00000460569 FBN3Q75N90 2809 aa7.45□□□□□ -1.22
UPF2-204ENST00000460569 UBE2CO00762 179 aa7.44□□□□□ -1.22
UPF2-204ENST00000460569 INSP01308 110 aa7.44□□□□□ -1.22
UPF2-204ENST00000460569 IGLV2-11P01706 119 aa7.44□□□□□ -1.22
UPF2-204ENST00000460569 GIG44P09565 113 aaPredicted RBP7.44□□□□□ -1.22
UPF2-204ENST00000460569 CEBPGP53567 150 aa7.44□□□□□ -1.22
UPF2-204ENST00000460569 SBSPONQ8IVN8 264 aa7.44□□□□□ -1.22
UPF2-204ENST00000460569 FAM19A4Q96LR4 140 aa7.44□□□□□ -1.22
UPF2-204ENST00000460569 DERL1Q9BUN8 251 aa7.44□□□□□ -1.22
UPF2-204ENST00000460569 LENEPQ9Y5L5 61 aa7.44□□□□□ -1.22
UPF2-204ENST00000460569 TRBV7-9A0A0J9YWB2 115 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 TMEM250H0YL14 139 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 S100A9P06702 114 aaKnown RBP7.43□□□□□ -1.22
UPF2-204ENST00000460569 GPX1P07203 203 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 CRISP2P16562 243 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 RPL35P42766 123 aaKnown RBP7.43□□□□□ -1.22
UPF2-204ENST00000460569 KIR3DS1Q14943 382 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 PEA15Q15121 130 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 TMEM183BQ1AE95 376 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 PRR9Q5T870 116 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 GFI1BQ5VTD9 330 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 ZFAND2AQ8N6M9 145 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 TVP23CQ96ET8 276 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 IGF2BP2-AS1Q96M15 143 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 C8orf49Q96NF6 230 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 B9D2Q9BPU9 175 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 RETNQ9HD89 108 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 TREM1Q9NP99 234 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 KLF12Q9Y4X4 402 aa7.43□□□□□ -1.22
UPF2-204ENST00000460569 IGHV3OR16-12A0A075B7B8 117 aa7.42□□□□□ -1.22
UPF2-204ENST00000460569 TRBV6-1A0A0K0K1D8 114 aa7.42□□□□□ -1.22
UPF2-204ENST00000460569 C7orf71A4D174 169 aa7.42□□□□□ -1.22
UPF2-204ENST00000460569 KLLNB2CW77 178 aa7.42□□□□□ -1.22
UPF2-204ENST00000460569 CRXO43186 299 aaPredicted RBP7.42□□□□□ -1.22
UPF2-204ENST00000460569 SRP19P09132 144 aaKnown RBP7.42□□□□□ -1.22
UPF2-204ENST00000460569 RNASE4P34096 147 aaKnown RBP7.42□□□□□ -1.22
UPF2-204ENST00000460569 SRSF3P84103 164 aaKnown RBP7.42□□□□□ -1.22
UPF2-204ENST00000460569 BTN1A1Q13410 526 aa7.42□□□□□ -1.22
UPF2-204ENST00000460569 ZNF674Q2M3X9 581 aa7.42□□□□□ -1.22
UPF2-204ENST00000460569 SAPCD1Q5SSQ6 148 aa7.42□□□□□ -1.22
UPF2-204ENST00000460569 Q6ZWC4 215 aa7.42□□□□□ -1.22
UPF2-204ENST00000460569 RCHY1Q96PM5 261 aa7.42□□□□□ -1.22
UPF2-204ENST00000460569 TMEM208Q9BTX3 173 aa7.42□□□□□ -1.22
UPF2-204ENST00000460569 PARLQ9H300 379 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms