RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 RXFP4Q8TDU9 374 aa10.69□□□□□ -0.7
ATG4B-213ENST00000460211 ZNF503Q96F45 646 aa10.69□□□□□ -0.7
ATG4B-213ENST00000460211 PHYHIPLQ96FC7 376 aa10.69□□□□□ -0.7
ATG4B-213ENST00000460211 Q9H3A6 140 aa10.69□□□□□ -0.7
ATG4B-213ENST00000460211 KMT2AQ03164 3969 aa10.69□□□□□ -0.7
ATG4B-213ENST00000460211 HERC2O95714 4834 aa10.69□□□□□ -0.7
ATG4B-213ENST00000460211 LYRM9A8MSI8 78 aa10.68□□□□□ -0.7
ATG4B-213ENST00000460211 J3KRW8 73 aa10.68□□□□□ -0.7
ATG4B-213ENST00000460211 ARPC5O15511 151 aa10.68□□□□□ -0.7
ATG4B-213ENST00000460211 CDC34P49427 236 aaPredicted RBP10.68□□□□□ -0.7
ATG4B-213ENST00000460211 DAD1P61803 113 aa10.68□□□□□ -0.7
ATG4B-213ENST00000460211 ERCC8Q13216 396 aa10.68□□□□□ -0.7
ATG4B-213ENST00000460211 GFI1BQ5VTD9 330 aa10.68□□□□□ -0.7
ATG4B-213ENST00000460211 RPL7L1Q6DKI1 246 aaKnown RBP10.68□□□□□ -0.7
ATG4B-213ENST00000460211 C9orf47Q6ZRZ4 202 aa10.68□□□□□ -0.7
ATG4B-213ENST00000460211 CMTM2Q8TAZ6 248 aa10.68□□□□□ -0.7
ATG4B-213ENST00000460211 C16orf74Q96GX8 76 aa10.68□□□□□ -0.7
ATG4B-213ENST00000460211 ACTR3CQ9C0K3 210 aaPredicted RBP10.68□□□□□ -0.7
ATG4B-213ENST00000460211 AGPAT4-IT1Q9H0P7 198 aa10.68□□□□□ -0.7
ATG4B-213ENST00000460211 IGKV2-40A0A087WW87 121 aaPredicted RBP10.67□□□□□ -0.7
ATG4B-213ENST00000460211 IGKV2D-40P01614 121 aaPredicted RBP10.67□□□□□ -0.7
ATG4B-213ENST00000460211 NMBP08949 121 aa10.67□□□□□ -0.7
ATG4B-213ENST00000460211 OTORQ9NRC9 128 aa10.67□□□□□ -0.7
ATG4B-213ENST00000460211 TRAV12-3A0A0B4J271 114 aa10.66□□□□□ -0.7
ATG4B-213ENST00000460211 RBAKDNA6NC62 111 aa10.66□□□□□ -0.7
ATG4B-213ENST00000460211 PGPA6NDG6 321 aa10.66□□□□□ -0.7
ATG4B-213ENST00000460211 PRM2P04554 102 aa10.66□□□□□ -0.7
ATG4B-213ENST00000460211 GPX1P07203 203 aa10.66□□□□□ -0.7
ATG4B-213ENST00000460211 AZU1P20160 251 aa10.66□□□□□ -0.7
ATG4B-213ENST00000460211 KIR3DS1Q14943 382 aa10.66□□□□□ -0.7
ATG4B-213ENST00000460211 TMEM263Q8WUH6 116 aaKnown RBP10.66□□□□□ -0.7
ATG4B-213ENST00000460211 RAB24Q969Q5 203 aa10.66□□□□□ -0.7
ATG4B-213ENST00000460211 PYGO2Q9BRQ0 406 aa10.66□□□□□ -0.7
ATG4B-213ENST00000460211 DNAH10Q8IVF4 4471 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 IGHV4-4A0A075B6R2 117 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 TRBV7-9A0A0J9YWB2 115 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 C7orf71A4D174 169 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 G3V3Q6 166 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 HMGB3O15347 200 aaKnown RBP10.65□□□□□ -0.7
ATG4B-213ENST00000460211 EIF3GO75821 320 aaKnown RBP eCLIP10.65□□□□□ -0.7
ATG4B-213ENST00000460211 STAG3L2P0CL84 134 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 STAG3L3P0CL85 134 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 ARL14EPLP0DKL9 152 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 CRISP2P16562 243 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 ZNF138P52744 262 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 LGALS9CQ6DKI2 356 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 FAM210BQ96KR6 192 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 HYLS1Q96M11 299 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 VGLL1Q99990 258 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 SH3BGRL3Q9H299 93 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 ZNF492Q9P255 531 aa10.65□□□□□ -0.7
ATG4B-213ENST00000460211 TIMM8BQ9Y5J9 83 aaPredicted RBP10.65□□□□□ -0.7
ATG4B-213ENST00000460211 KLLNB2CW77 178 aa10.64□□□□□ -0.71
ATG4B-213ENST00000460211 DIRC3C9JPN6 131 aa10.64□□□□□ -0.71
ATG4B-213ENST00000460211 CXorf1O96002 111 aa10.64□□□□□ -0.71
ATG4B-213ENST00000460211 HTN3P15516 51 aa10.64□□□□□ -0.71
ATG4B-213ENST00000460211 RNASE4P34096 147 aaKnown RBP10.64□□□□□ -0.71
ATG4B-213ENST00000460211 AKR1C8PQ5T2L2 129 aa10.64□□□□□ -0.71
ATG4B-213ENST00000460211 ARL6IP6Q8N6S5 226 aa10.64□□□□□ -0.71
ATG4B-213ENST00000460211 FAM19A4Q96LR4 140 aa10.64□□□□□ -0.71
ATG4B-213ENST00000460211 NDUFAF3Q9BU61 184 aa10.64□□□□□ -0.71
ATG4B-213ENST00000460211 TMEM167BQ9NRX6 74 aa10.64□□□□□ -0.71
ATG4B-213ENST00000460211 APLNQ9ULZ1 77 aa10.64□□□□□ -0.71
ATG4B-213ENST00000460211 SMLR1H3BR10 107 aa10.63□□□□□ -0.71
ATG4B-213ENST00000460211 DEFB130BP0DP73 79 aa10.63□□□□□ -0.71
ATG4B-213ENST00000460211 DEFB130AP0DP74 79 aa10.63□□□□□ -0.71
ATG4B-213ENST00000460211 GCHFRP30047 84 aa10.63□□□□□ -0.71
ATG4B-213ENST00000460211 RNASE8Q8TDE3 154 aaKnown RBP10.63□□□□□ -0.71
ATG4B-213ENST00000460211 PLA2G2EQ9NZK7 142 aa10.63□□□□□ -0.71
ATG4B-213ENST00000460211 HMSDA8MTL9 139 aa10.62□□□□□ -0.71
ATG4B-213ENST00000460211 SNURFLB1AK76 121 aa10.62□□□□□ -0.71
ATG4B-213ENST00000460211 BTN1A1Q13410 526 aa10.62□□□□□ -0.71
ATG4B-213ENST00000460211 ZNF345Q14585 488 aa10.62□□□□□ -0.71
ATG4B-213ENST00000460211 ARPC5LQ9BPX5 153 aa10.62□□□□□ -0.71
ATG4B-213ENST00000460211 NOP10Q9NPE3 64 aaKnown RBP10.62□□□□□ -0.71
ATG4B-213ENST00000460211 RPH3ALQ9UNE2 315 aa10.62□□□□□ -0.71
ATG4B-213ENST00000460211 LENEPQ9Y5L5 61 aa10.62□□□□□ -0.71
ATG4B-213ENST00000460211 HECTD4Q9Y4D8 3996 aa10.61□□□□□ -0.71
ATG4B-213ENST00000460211 A0A0D9SG52 128 aa10.61□□□□□ -0.71
ATG4B-213ENST00000460211 PLAC8L1A1L4L8 177 aa10.61□□□□□ -0.71
ATG4B-213ENST00000460211 CBY3A6NI87 242 aa10.61□□□□□ -0.71
ATG4B-213ENST00000460211 RGS13O14921 159 aa10.61□□□□□ -0.71
ATG4B-213ENST00000460211 ZNF324O75467 553 aaPredicted RBP10.61□□□□□ -0.71
ATG4B-213ENST00000460211 CD300CQ08708 224 aa10.61□□□□□ -0.71
ATG4B-213ENST00000460211 IQCF2Q8IXL9 164 aa10.61□□□□□ -0.71
ATG4B-213ENST00000460211 KCNRGQ8N5I3 272 aa10.61□□□□□ -0.71
ATG4B-213ENST00000460211 ZFAND2AQ8N6M9 145 aa10.61□□□□□ -0.71
ATG4B-213ENST00000460211 ZNF680Q8NEM1 530 aa10.61□□□□□ -0.71
ATG4B-213ENST00000460211 Q8TAT8 98 aa10.61□□□□□ -0.71
ATG4B-213ENST00000460211 TMED6Q8WW62 240 aa10.61□□□□□ -0.71
ATG4B-213ENST00000460211 ST6GAL2Q96JF0 529 aa10.61□□□□□ -0.71
ATG4B-213ENST00000460211 LINC00467Q9BRT7 94 aa10.61□□□□□ -0.71
ATG4B-213ENST00000460211 PCLOQ9Y6V0 5065 aa10.61□□□□□ -0.71
ATG4B-213ENST00000460211 CTXND1A0A1B0GTU2 59 aa10.6□□□□□ -0.71
ATG4B-213ENST00000460211 SERTM2A0A1B0GWG4 89 aa10.6□□□□□ -0.71
ATG4B-213ENST00000460211 KANTRA0A1W2PQU2 76 aa10.6□□□□□ -0.71
ATG4B-213ENST00000460211 K7EQM0 130 aa10.6□□□□□ -0.71
ATG4B-213ENST00000460211 ATP5G1P05496 136 aa10.6□□□□□ -0.71
ATG4B-213ENST00000460211 ATP5G3P48201 142 aa10.6□□□□□ -0.71
ATG4B-213ENST00000460211 EIF5AP63241 154 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms