RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 KCNIP2Q9NS61 270 aa15.86■□□□□ 0.13
PTPN4-207ENST00000460162 E5RGE8 158 aa15.85■□□□□ 0.13
PTPN4-207ENST00000460162 HOXA5P20719 270 aa15.85■□□□□ 0.13
PTPN4-207ENST00000460162 GCSAMLQ5JQS6 135 aa15.85■□□□□ 0.13
PTPN4-207ENST00000460162 THAP6Q8TBB0 222 aa15.85■□□□□ 0.13
PTPN4-207ENST00000460162 LINC00467Q9BRT7 94 aa15.85■□□□□ 0.13
PTPN4-207ENST00000460162 SLC25A2Q9BXI2 301 aa15.85■□□□□ 0.13
PTPN4-207ENST00000460162 NMES1Q9C002 83 aa15.85■□□□□ 0.13
PTPN4-207ENST00000460162 RYR1P21817 5038 aa15.84■□□□□ 0.13
PTPN4-207ENST00000460162 NHLH2Q02577 135 aa15.84■□□□□ 0.13
PTPN4-207ENST00000460162 ERCC8Q13216 396 aa15.84■□□□□ 0.13
PTPN4-207ENST00000460162 ZNF575Q86XF7 245 aa15.84■□□□□ 0.13
PTPN4-207ENST00000460162 EXOC3-AS1Q8N2X6 119 aa15.84■□□□□ 0.13
PTPN4-207ENST00000460162 BLNKQ8WV28 456 aa15.84■□□□□ 0.13
PTPN4-207ENST00000460162 TMPRSS5Q9H3S3 457 aa15.84■□□□□ 0.13
PTPN4-207ENST00000460162 UPK1BO75841 260 aa15.83■□□□□ 0.12
PTPN4-207ENST00000460162 CRISP2P16562 243 aa15.83■□□□□ 0.12
PTPN4-207ENST00000460162 TNP2Q05952 138 aa15.83■□□□□ 0.12
PTPN4-207ENST00000460162 C9orf47Q6ZRZ4 202 aa15.83■□□□□ 0.12
PTPN4-207ENST00000460162 Q6ZTI0 123 aa15.83■□□□□ 0.12
PTPN4-207ENST00000460162 C11orf72Q8NBR9 251 aa15.83■□□□□ 0.12
PTPN4-207ENST00000460162 FAM167A-AS1Q96KT0 104 aa15.83■□□□□ 0.12
PTPN4-207ENST00000460162 C18orf15Q96N68 181 aa15.83■□□□□ 0.12
PTPN4-207ENST00000460162 MRPL32Q9BYC8 188 aaKnown RBP15.83■□□□□ 0.12
PTPN4-207ENST00000460162 MUC4Q99102 2169 aa15.82■□□□□ 0.12
PTPN4-207ENST00000460162 A0A0J9YY99 117 aa15.82■□□□□ 0.12
PTPN4-207ENST00000460162 PRAF2O60831 178 aa15.82■□□□□ 0.12
PTPN4-207ENST00000460162 NMBP08949 121 aa15.82■□□□□ 0.12
PTPN4-207ENST00000460162 BTN1A1Q13410 526 aa15.82■□□□□ 0.12
PTPN4-207ENST00000460162 ANXA2RQ3ZCQ2 193 aa15.82■□□□□ 0.12
PTPN4-207ENST00000460162 LRRC37A5PQ49AS3 106 aa15.82■□□□□ 0.12
PTPN4-207ENST00000460162 TTC32Q5I0X7 151 aa15.82■□□□□ 0.12
PTPN4-207ENST00000460162 MIR17HGQ75NE6 70 aa15.82■□□□□ 0.12
PTPN4-207ENST00000460162 EIF4E3Q8N5X7 224 aaKnown RBP15.82■□□□□ 0.12
PTPN4-207ENST00000460162 UPK3BQ9BT76 320 aa15.82■□□□□ 0.12
PTPN4-207ENST00000460162 AGPAT4-IT1Q9H0P7 198 aa15.82■□□□□ 0.12
PTPN4-207ENST00000460162 OR5AC2Q9NZP5 309 aa15.82■□□□□ 0.12
PTPN4-207ENST00000460162 ZNF324O75467 553 aaPredicted RBP15.81■□□□□ 0.12
PTPN4-207ENST00000460162 SIX6O95475 246 aa15.81■□□□□ 0.12
PTPN4-207ENST00000460162 CYCSP99999 105 aaKnown RBP15.81■□□□□ 0.12
PTPN4-207ENST00000460162 CD300CQ08708 224 aa15.81■□□□□ 0.12
PTPN4-207ENST00000460162 ICAM4Q14773 271 aa15.81■□□□□ 0.12
PTPN4-207ENST00000460162 WDR61Q9GZS3 305 aaKnown RBP15.81■□□□□ 0.12
PTPN4-207ENST00000460162 Q9H8V8 135 aa15.81■□□□□ 0.12
PTPN4-207ENST00000460162 GSN-AS1Q9NRJ2 163 aa15.81■□□□□ 0.12
PTPN4-207ENST00000460162 IGKV2-40A0A087WW87 121 aaPredicted RBP15.8■□□□□ 0.12
PTPN4-207ENST00000460162 IGKV2D-40P01614 121 aaPredicted RBP15.8■□□□□ 0.12
PTPN4-207ENST00000460162 TMEM78Q5T7P6 136 aa15.8■□□□□ 0.12
PTPN4-207ENST00000460162 OR51M1Q9H341 326 aa15.8■□□□□ 0.12
PTPN4-207ENST00000460162 TRGV2A0A075B6R0 118 aa15.79■□□□□ 0.12
PTPN4-207ENST00000460162 GPX1P07203 203 aa15.79■□□□□ 0.12
PTPN4-207ENST00000460162 NBEAP1P0C6P0 100 aa15.79■□□□□ 0.12
PTPN4-207ENST00000460162 TCL1AP56279 114 aa15.79■□□□□ 0.12
PTPN4-207ENST00000460162 IBA57Q5T440 356 aaKnown RBP15.79■□□□□ 0.12
PTPN4-207ENST00000460162 FAM122CQ6P4D5 195 aa15.79■□□□□ 0.12
PTPN4-207ENST00000460162 C17orf112F2Z3M2 114 aa15.78■□□□□ 0.12
PTPN4-207ENST00000460162 H0YIZ8 118 aa15.78■□□□□ 0.12
PTPN4-207ENST00000460162 RNASE4P34096 147 aaKnown RBP15.78■□□□□ 0.12
PTPN4-207ENST00000460162 ZFAND2AQ8N6M9 145 aa15.78■□□□□ 0.12
PTPN4-207ENST00000460162 FXYD5Q96DB9 178 aa15.78■□□□□ 0.12
PTPN4-207ENST00000460162 Q9H3A6 140 aa15.78■□□□□ 0.12
PTPN4-207ENST00000460162 FUT9Q9Y231 359 aa15.78■□□□□ 0.12
PTPN4-207ENST00000460162 MRPS16Q9Y3D3 137 aaKnown RBP15.78■□□□□ 0.12
PTPN4-207ENST00000460162 TRGV1A0A0A0MS02 117 aa15.77■□□□□ 0.12
PTPN4-207ENST00000460162 TRBV7-9A0A0J9YWB2 115 aa15.77■□□□□ 0.12
PTPN4-207ENST00000460162 PAXXQ9BUH6 204 aa15.77■□□□□ 0.12
PTPN4-207ENST00000460162 ZNF492Q9P255 531 aa15.77■□□□□ 0.12
PTPN4-207ENST00000460162 A0A1W2PPQ1 181 aa15.76■□□□□ 0.11
PTPN4-207ENST00000460162 INMT-MINDY4F8WBC2 141 aa15.76■□□□□ 0.11
PTPN4-207ENST00000460162 SPINK4O60575 86 aa15.76■□□□□ 0.11
PTPN4-207ENST00000460162 OR10J4P0C629 311 aa15.76■□□□□ 0.11
PTPN4-207ENST00000460162 ESRGQ1W209 222 aa15.76■□□□□ 0.11
PTPN4-207ENST00000460162 PRR9Q5T870 116 aa15.76■□□□□ 0.11
PTPN4-207ENST00000460162 PHYHIPLQ96FC7 376 aa15.76■□□□□ 0.11
PTPN4-207ENST00000460162 ATP5SQ99766 215 aa15.76■□□□□ 0.11
PTPN4-207ENST00000460162 VGLL1Q99990 258 aa15.76■□□□□ 0.11
PTPN4-207ENST00000460162 KRTAP1-5Q9BYS1 174 aa15.76■□□□□ 0.11
PTPN4-207ENST00000460162 C16orf90A8MZG2 172 aa15.75■□□□□ 0.11
PTPN4-207ENST00000460162 RGS13O14921 159 aa15.75■□□□□ 0.11
PTPN4-207ENST00000460162 PET100P0DJ07 73 aa15.75■□□□□ 0.11
PTPN4-207ENST00000460162 H2BFSP57053 126 aa15.75■□□□□ 0.11
PTPN4-207ENST00000460162 IFITM3Q01628 133 aa15.75■□□□□ 0.11
PTPN4-207ENST00000460162 PPP1R1CQ8WVI7 109 aa15.75■□□□□ 0.11
PTPN4-207ENST00000460162 VSIG2Q96IQ7 327 aa15.75■□□□□ 0.11
PTPN4-207ENST00000460162 A0A096LPF7 62 aa15.74■□□□□ 0.11
PTPN4-207ENST00000460162 OR7C2O60412 319 aa15.74■□□□□ 0.11
PTPN4-207ENST00000460162 ZNF138P52744 262 aa15.74■□□□□ 0.11
PTPN4-207ENST00000460162 ARPC5LQ9BPX5 153 aa15.74■□□□□ 0.11
PTPN4-207ENST00000460162 MARVELD1Q9BSK0 173 aa15.74■□□□□ 0.11
PTPN4-207ENST00000460162 PTTG2Q9NZH5 202 aa15.74■□□□□ 0.11
PTPN4-207ENST00000460162 KLF12Q9Y4X4 402 aa15.74■□□□□ 0.11
PTPN4-207ENST00000460162 ABCA13Q86UQ4 5058 aa15.74■□□□□ 0.11
PTPN4-207ENST00000460162 IGHV1OR15-1A0A075B7D0 117 aa15.73■□□□□ 0.11
PTPN4-207ENST00000460162 RBAKDNA6NC62 111 aa15.73■□□□□ 0.11
PTPN4-207ENST00000460162 BTF3P20290 206 aaKnown RBP15.73■□□□□ 0.11
PTPN4-207ENST00000460162 CSN1S1P47710 185 aa15.73■□□□□ 0.11
PTPN4-207ENST00000460162 LYPD1Q8N2G4 141 aa15.73■□□□□ 0.11
PTPN4-207ENST00000460162 Q8TAT8 98 aa15.73■□□□□ 0.11
PTPN4-207ENST00000460162 ST6GAL2Q96JF0 529 aa15.73■□□□□ 0.11
PTPN4-207ENST00000460162 UBE2L3P68036 154 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms