RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 ZC3H13Q5T200 1668 aaKnown RBP2.09□□□□□ -2.07
VPS8-215ENST00000460158 ROBO1Q9Y6N7 1651 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 COL18A1P39060 1754 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 TRGV5A0A0B4J1U4 118 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 C7orf66A4D0T2 115 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 C19orf71A6NCJ1 209 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 G3V3Q6 166 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 PRB2P02812 416 aaPredicted RBP2.09□□□□□ -2.07
VPS8-215ENST00000460158 SAA1P0DJI8 122 aaPredicted RBP2.09□□□□□ -2.07
VPS8-215ENST00000460158 IL7P13232 177 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 CKS2P33552 79 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 ETV6P41212 452 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 NPC2P61916 151 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 SUPT4H1P63272 117 aaKnown RBP2.09□□□□□ -2.07
VPS8-215ENST00000460158 EBI3Q14213 229 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 SS18Q15532 418 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.09□□□□□ -2.07
VPS8-215ENST00000460158 MIC13Q5XKP0 118 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 PATE2Q6UY27 113 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 C2orf91Q6ZV80 131 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 OR5AK2Q8NH90 309 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 OTOSQ8NHW6 89 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 FGF13Q92913 245 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 MRPS24Q96EL2 167 aaKnown RBP2.09□□□□□ -2.07
VPS8-215ENST00000460158 LINC00467Q9BRT7 94 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 BCL2L10Q9HD36 194 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 MED9Q9NWA0 146 aa2.09□□□□□ -2.07
VPS8-215ENST00000460158 NHP2Q9NX24 153 aaKnown RBP2.09□□□□□ -2.07
VPS8-215ENST00000460158 SLX4Q8IY92 1834 aa2.09□□□□□ -2.08
VPS8-215ENST00000460158 TANC1Q9C0D5 1861 aa2.09□□□□□ -2.08
VPS8-215ENST00000460158 PLXNA4Q9HCM2 1894 aa2.09□□□□□ -2.08
VPS8-215ENST00000460158 USP54Q70EL1 1684 aa2.09□□□□□ -2.08
VPS8-215ENST00000460158 RIC1Q4ADV7 1423 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 GAPVD1Q14C86 1478 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 IFT140Q96RY7 1462 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 MYO18AQ92614 2054 aaKnown RBP2.08□□□□□ -2.08
VPS8-215ENST00000460158 DOCK9Q9BZ29 2069 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 KIAA2026Q5HYC2 2103 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 CPAMD8Q8IZJ3 1885 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 FRMPD1Q5SYB0 1578 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 MDFIC2A0A1B0GVS7 189 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 A0A1W2PQD3 144 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 OOSP1A8MZH6 123 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 M0R2P5 195 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 RTL8CO15255 209 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 EDF1O60869 148 aaKnown RBP2.08□□□□□ -2.08
VPS8-215ENST00000460158 SNCGO76070 127 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 IGLC1P0CG04 106 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 ZNF14P17017 642 aaPredicted RBP2.08□□□□□ -2.08
VPS8-215ENST00000460158 RPL28P46779 137 aaKnown RBP2.08□□□□□ -2.08
VPS8-215ENST00000460158 XCL1P47992 114 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 IQCJQ1A5X6 159 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 Q6ZQT7 251 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 C3orf56Q8N813 242 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 CLEC2BQ92478 149 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 AQP3Q92482 292 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 LINC00574Q9H8X3 128 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 ASF1BQ9NVP2 202 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 KLK12Q9UKR0 248 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 TIMM9Q9Y5J7 89 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 TOPAZ1Q8N9V7 1692 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 CCDC88CQ9P219 2028 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 MON2Q7Z3U7 1717 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 LTN1O94822 1766 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 CLIP1P30622 1438 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 UACAQ9BZF9 1416 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 MALRD1Q5VYJ5 2156 aa2.08□□□□□ -2.08
VPS8-215ENST00000460158 MAGI2Q86UL8 1455 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 PLEKHH2Q8IVE3 1493 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 CASP8AP2Q9UKL3 1982 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 SMARCA4P51532 1647 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 LTBP4Q8N2S1 1624 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 SHBGP04278 402 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 GYPBP06028 91 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 COX6A1P12074 109 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 CCL4P13236 92 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 CD24P25063 80 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 PEBP1P30086 187 aaKnown RBP2.07□□□□□ -2.08
VPS8-215ENST00000460158 FUT5Q11128 374 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 PEA15Q15121 130 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 LGALSLQ3ZCW2 172 aaPredicted RBP2.07□□□□□ -2.08
VPS8-215ENST00000460158 FAM74A1Q5RGS3 127 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 ZNF660Q6AZW8 331 aaPredicted RBP2.07□□□□□ -2.08
VPS8-215ENST00000460158 OR2T35Q8NGX2 323 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 SPTSSAQ969W0 71 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 HYLS1Q96M11 299 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 RETNLBQ9BQ08 111 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 SCN11AQ9UI33 1791 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 COL11A1P12107 1806 aaPredicted RBP2.07□□□□□ -2.08
VPS8-215ENST00000460158 EML5Q05BV3 1969 aa2.07□□□□□ -2.08
VPS8-215ENST00000460158 NINQ8N4C6 2090 aa2.06□□□□□ -2.08
VPS8-215ENST00000460158 THOC2Q8NI27 1593 aaKnown RBP2.06□□□□□ -2.08
VPS8-215ENST00000460158 IGLV3-16A0A075B6K0 115 aa2.06□□□□□ -2.08
VPS8-215ENST00000460158 IGKV1OR2-108A0A075B7D4 117 aa2.06□□□□□ -2.08
VPS8-215ENST00000460158 IGHV3-15A0A0B4J1V0 119 aa2.06□□□□□ -2.08
VPS8-215ENST00000460158 IGHV1-24A0A0C4DH33 117 aa2.06□□□□□ -2.08
VPS8-215ENST00000460158 TMEM235A6NFC5 223 aa2.06□□□□□ -2.08
VPS8-215ENST00000460158 C17orf112F2Z3M2 114 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms