RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 LYPD1Q8N2G4 141 aa15.24■□□□□ 0.03
CNEP1R1-203ENST00000458059 HBDP02042 147 aa15.23■□□□□ 0.03
CNEP1R1-203ENST00000458059 IFI27L1Q96BM0 104 aa15.23■□□□□ 0.03
CNEP1R1-203ENST00000458059 RAB1BQ9H0U4 201 aa15.23■□□□□ 0.03
CNEP1R1-203ENST00000458059 GAGE12BA1L429 117 aa15.23■□□□□ 0.03
CNEP1R1-203ENST00000458059 SPRY2O43597 315 aa15.23■□□□□ 0.03
CNEP1R1-203ENST00000458059 CD5LO43866 347 aa15.23■□□□□ 0.03
CNEP1R1-203ENST00000458059 CTSGP08311 255 aa15.22■□□□□ 0.03
CNEP1R1-203ENST00000458059 VPS13CQ709C8 3753 aa15.22■□□□□ 0.03
CNEP1R1-203ENST00000458059 FGF6P10767 208 aa15.22■□□□□ 0.03
CNEP1R1-203ENST00000458059 CEACAM3P40198 252 aa15.22■□□□□ 0.03
CNEP1R1-203ENST00000458059 VMO1Q7Z5L0 202 aa15.22■□□□□ 0.03
CNEP1R1-203ENST00000458059 RPL7P18124 248 aaKnown RBP15.21■□□□□ 0.03
CNEP1R1-203ENST00000458059 AP1S3Q96PC3 154 aa15.21■□□□□ 0.03
CNEP1R1-203ENST00000458059 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.21■□□□□ 0.037e-10■■■□□ 14.7
CNEP1R1-203ENST00000458059 IGHG4P01861 327 aa15.21■□□□□ 0.03
CNEP1R1-203ENST00000458059 OCIAD2Q56VL3 154 aa15.21■□□□□ 0.03
CNEP1R1-203ENST00000458059 Q6AWC8 147 aa15.21■□□□□ 0.03
CNEP1R1-203ENST00000458059 JMJD8Q96S16 334 aa15.21■□□□□ 0.03
CNEP1R1-203ENST00000458059 TRBV6-1A0A0K0K1D8 114 aa15.21■□□□□ 0.02
CNEP1R1-203ENST00000458059 SAP30O75446 220 aa15.21■□□□□ 0.02
CNEP1R1-203ENST00000458059 ZNF493Q6ZR52 646 aa15.21■□□□□ 0.02
CNEP1R1-203ENST00000458059 IL17RELQ6ZVW7 336 aa15.21■□□□□ 0.02
CNEP1R1-203ENST00000458059 GAGE10A6NGK3 116 aa15.2■□□□□ 0.02
CNEP1R1-203ENST00000458059 ZNF562Q6V9R5 426 aa15.2■□□□□ 0.02
CNEP1R1-203ENST00000458059 TIMD4Q96H15 378 aa15.2■□□□□ 0.02
CNEP1R1-203ENST00000458059 RNF5Q99942 180 aa15.2■□□□□ 0.02
CNEP1R1-203ENST00000458059 TRAV26-2A0A0B4J265 109 aa15.2■□□□□ 0.02
CNEP1R1-203ENST00000458059 LEPP41159 167 aa15.2■□□□□ 0.02
CNEP1R1-203ENST00000458059 PEF1Q9UBV8 284 aaKnown RBP15.2■□□□□ 0.02
CNEP1R1-203ENST00000458059 LINC00527Q9UJ94 153 aa15.2■□□□□ 0.02
CNEP1R1-203ENST00000458059 NDUFA3O95167 84 aa15.19■□□□□ 0.02
CNEP1R1-203ENST00000458059 C15orf32Q32M92 178 aa15.19■□□□□ 0.02
CNEP1R1-203ENST00000458059 VKORC1Q9BQB6 163 aa15.19■□□□□ 0.02
CNEP1R1-203ENST00000458059 A0A1B0GW15 77 aa15.19■□□□□ 0.02
CNEP1R1-203ENST00000458059 CLEC3BP05452 202 aa15.19■□□□□ 0.02
CNEP1R1-203ENST00000458059 PRSS1P07477 247 aa15.19■□□□□ 0.02
CNEP1R1-203ENST00000458059 OR11H6Q8NGC7 330 aa15.19■□□□□ 0.02
CNEP1R1-203ENST00000458059 A1L4Q6 167 aa15.18■□□□□ 0.02
CNEP1R1-203ENST00000458059 LINC01548A6NM66 108 aa15.18■□□□□ 0.02
CNEP1R1-203ENST00000458059 G3V318 75 aa15.18■□□□□ 0.02
CNEP1R1-203ENST00000458059 ZFP36P26651 326 aaKnown RBP15.18■□□□□ 0.02
CNEP1R1-203ENST00000458059 CDKN1BP46527 198 aa15.18■□□□□ 0.02
CNEP1R1-203ENST00000458059 PDE6HQ13956 83 aa15.18■□□□□ 0.02
CNEP1R1-203ENST00000458059 LY6G5BQ8NDX9 201 aa15.18■□□□□ 0.02
CNEP1R1-203ENST00000458059 NPBQ8NG41 125 aa15.18■□□□□ 0.02
CNEP1R1-203ENST00000458059 SAPCD1Q5SSQ6 148 aa15.18■□□□□ 0.02
CNEP1R1-203ENST00000458059 KIR3DS1Q14943 382 aa15.18■□□□□ 0.02
CNEP1R1-203ENST00000458059 UFC1Q9Y3C8 167 aa15.18■□□□□ 0.02
CNEP1R1-203ENST00000458059 IGKV2D-26A0A0A0MRZ7 120 aa15.17■□□□□ 0.02
CNEP1R1-203ENST00000458059 CLEC19AQ6UXS0 136 aa15.17■□□□□ 0.02
CNEP1R1-203ENST00000458059 ZNF575Q86XF7 245 aa15.17■□□□□ 0.02
CNEP1R1-203ENST00000458059 IGHV7-81A0A0B4J1V7 117 aa15.17■□□□□ 0.02
CNEP1R1-203ENST00000458059 SMAD7O15105 426 aaKnown RBP15.17■□□□□ 0.02
CNEP1R1-203ENST00000458059 TRGV3P03979 118 aa15.17■□□□□ 0.02
CNEP1R1-203ENST00000458059 PRTN3P24158 256 aa15.16■□□□□ 0.02
CNEP1R1-203ENST00000458059 SRSF8Q9BRL6 282 aaKnown RBP15.16■□□□□ 0.02
CNEP1R1-203ENST00000458059 IGHV3OR16-10A0A075B7F0 116 aa15.16■□□□□ 0.02
CNEP1R1-203ENST00000458059 GCSHP23434 173 aa15.15■□□□□ 0.02
CNEP1R1-203ENST00000458059 LGALS9BQ3B8N2 356 aa15.15■□□□□ 0.02
CNEP1R1-203ENST00000458059 LGALS9CQ6DKI2 356 aa15.15■□□□□ 0.02
CNEP1R1-203ENST00000458059 GATD1Q8NB37 220 aa15.15■□□□□ 0.02
CNEP1R1-203ENST00000458059 RNF185Q96GF1 192 aa15.15■□□□□ 0.02
CNEP1R1-203ENST00000458059 U3KQK5 164 aa15.15■□□□□ 0.02
CNEP1R1-203ENST00000458059 RIPPLY3P57055 190 aa15.15■□□□□ 0.02
CNEP1R1-203ENST00000458059 GTSCR1Q86UQ5 136 aa15.15■□□□□ 0.02
CNEP1R1-203ENST00000458059 MAP1LC3AQ9H492 121 aa15.15■□□□□ 0.02
CNEP1R1-203ENST00000458059 TTC9CQ8N5M4 171 aa15.15■□□□□ 0.02
CNEP1R1-203ENST00000458059 DEFB104AQ8WTQ1 72 aa15.15■□□□□ 0.02
CNEP1R1-203ENST00000458059 FOXC2Q99958 501 aa15.15■□□□□ 0.02
CNEP1R1-203ENST00000458059 K7ERJ3 54 aa15.14■□□□□ 0.01
CNEP1R1-203ENST00000458059 TNFRSF6BO95407 300 aa15.14■□□□□ 0.01
CNEP1R1-203ENST00000458059 BMI1P35226 326 aa15.14■□□□□ 0.01
CNEP1R1-203ENST00000458059 DEFB1P60022 68 aa15.14■□□□□ 0.01
CNEP1R1-203ENST00000458059 BOD1L2Q8IYS8 172 aa15.14■□□□□ 0.01
CNEP1R1-203ENST00000458059 C11orf21Q9P2W6 132 aa15.14■□□□□ 0.01
CNEP1R1-203ENST00000458059 ODF3BA8MYP8 253 aa15.14■□□□□ 0.01
CNEP1R1-203ENST00000458059 ATP6V0E1O15342 81 aa15.13■□□□□ 0.01
CNEP1R1-203ENST00000458059 IGLC6P0CF74 106 aa15.13■□□□□ 0.01
CNEP1R1-203ENST00000458059 S100A7AQ86SG5 101 aa15.13■□□□□ 0.01
CNEP1R1-203ENST00000458059 FABP5P3A8MUU1 101 aa15.13■□□□□ 0.01
CNEP1R1-203ENST00000458059 TMEM158Q8WZ71 300 aa15.13■□□□□ 0.01
CNEP1R1-203ENST00000458059 A0A0G2JLM5 398 aa15.12■□□□□ 0.01
CNEP1R1-203ENST00000458059 MEGF9Q9H1U4 602 aa15.12■□□□□ 0.01
CNEP1R1-203ENST00000458059 KLK15Q9H2R5 256 aa15.12■□□□□ 0.01
CNEP1R1-203ENST00000458059 AGRNO00468 2067 aa15.12■□□□□ 0.01
CNEP1R1-203ENST00000458059 IGKV3-7A0A075B6H7 116 aa15.12■□□□□ 0.01
CNEP1R1-203ENST00000458059 FBLL1A6NHQ2 334 aaKnown RBP15.12■□□□□ 0.01
CNEP1R1-203ENST00000458059 PAX8Q06710 450 aa15.12■□□□□ 0.01
CNEP1R1-203ENST00000458059 TMEM160Q9NX00 188 aa15.12■□□□□ 0.01
CNEP1R1-203ENST00000458059 SEC11AP67812 179 aa15.12■□□□□ 0.01
CNEP1R1-203ENST00000458059 DTX2Q86UW9 622 aa15.12■□□□□ 0.01
CNEP1R1-203ENST00000458059 TMEM219Q86XT9 240 aa15.12■□□□□ 0.01
CNEP1R1-203ENST00000458059 CSPG4Q6UVK1 2322 aa15.11■□□□□ 0.01
CNEP1R1-203ENST00000458059 A6NDN8 102 aa15.11■□□□□ 0.01
CNEP1R1-203ENST00000458059 Q8N9W7 124 aa15.11■□□□□ 0.01
CNEP1R1-203ENST00000458059 MSRB2Q9Y3D2 182 aa15.11■□□□□ 0.01
CNEP1R1-203ENST00000458059 IGKV3D-20A0A0C4DH25 116 aa15.1■□□□□ 0.01
CNEP1R1-203ENST00000458059 AGPAT4-IT1Q9H0P7 198 aa15.1■□□□□ 0.01
CNEP1R1-203ENST00000458059 ADAMTSL5Q6ZMM2 481 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms