RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 GAS8-AS1O95177 125 aa10.69□□□□□ -0.7
PTPRE-204ENST00000455661 BSPH1Q075Z2 132 aa10.69□□□□□ -0.7
PTPRE-204ENST00000455661 SH2D6Q7Z4S9 175 aa10.69□□□□□ -0.7
PTPRE-204ENST00000455661 ARPC1AQ92747 370 aa10.69□□□□□ -0.7
PTPRE-204ENST00000455661 MALRD1Q5VYJ5 2156 aa10.69□□□□□ -0.7
PTPRE-204ENST00000455661 NCBP2LA6PVI3 153 aaKnown RBP10.69□□□□□ -0.7
PTPRE-204ENST00000455661 MRPL35Q9NZE8 188 aaKnown RBP10.69□□□□□ -0.7
PTPRE-204ENST00000455661 K7EMI3 77 aa10.68□□□□□ -0.7
PTPRE-204ENST00000455661 CCDC144NLQ6NUI1 221 aa10.68□□□□□ -0.7
PTPRE-204ENST00000455661 MAPKAPK5-AS1Q8N8E1 139 aa10.68□□□□□ -0.7
PTPRE-204ENST00000455661 RNASE6Q93091 150 aaKnown RBP10.68□□□□□ -0.7
PTPRE-204ENST00000455661 DTX2Q86UW9 622 aa10.68□□□□□ -0.7
PTPRE-204ENST00000455661 NBR2O15453 112 aa10.67□□□□□ -0.7
PTPRE-204ENST00000455661 SCGB2A1O75556 95 aa10.67□□□□□ -0.7
PTPRE-204ENST00000455661 PLNP26678 52 aa10.67□□□□□ -0.7
PTPRE-204ENST00000455661 LAGE3Q14657 143 aa10.67□□□□□ -0.7
PTPRE-204ENST00000455661 RRN3P1Q2M238 152 aa10.67□□□□□ -0.7
PTPRE-204ENST00000455661 ZNF48Q96MX3 618 aaPredicted RBP10.67□□□□□ -0.7
PTPRE-204ENST00000455661 ZDBF2Q9HCK1 2354 aa10.67□□□□□ -0.7
PTPRE-204ENST00000455661 A0A087WX48 190 aa10.67□□□□□ -0.7
PTPRE-204ENST00000455661 GATA1P15976 413 aaPredicted RBP10.67□□□□□ -0.7
PTPRE-204ENST00000455661 CKS1BP61024 79 aa10.67□□□□□ -0.7
PTPRE-204ENST00000455661 AMTNQ6UX39 209 aa10.67□□□□□ -0.7
PTPRE-204ENST00000455661 TIMM23O14925 209 aa10.66□□□□□ -0.7
PTPRE-204ENST00000455661 ZNF575Q86XF7 245 aa10.66□□□□□ -0.7
PTPRE-204ENST00000455661 IGLV2-18A0A075B6J9 118 aa10.66□□□□□ -0.7
PTPRE-204ENST00000455661 RAB9AP51151 201 aa10.66□□□□□ -0.7
PTPRE-204ENST00000455661 IGFL4Q6B9Z1 124 aa10.66□□□□□ -0.7
PTPRE-204ENST00000455661 C21orf62Q9NYP8 219 aa10.66□□□□□ -0.7
PTPRE-204ENST00000455661 A0A1B0GWB2 263 aa10.65□□□□□ -0.7
PTPRE-204ENST00000455661 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.65□□□□□ -0.7
PTPRE-204ENST00000455661 LY6LH3BQJ8 138 aa10.65□□□□□ -0.7
PTPRE-204ENST00000455661 NDUFA3O95167 84 aa10.65□□□□□ -0.7
PTPRE-204ENST00000455661 PPIFP30405 207 aaKnown RBP10.65□□□□□ -0.7
PTPRE-204ENST00000455661 IGLV11-55A0A075B6I3 123 aa10.64□□□□□ -0.71
PTPRE-204ENST00000455661 HLA-DMBP28068 263 aa10.64□□□□□ -0.71
PTPRE-204ENST00000455661 TCTEX1D4Q5JR98 221 aa10.64□□□□□ -0.71
PTPRE-204ENST00000455661 FAM57AQ8TBR7 257 aa10.64□□□□□ -0.71
PTPRE-204ENST00000455661 PRSS47A8MTI9 375 aa10.64□□□□□ -0.71
PTPRE-204ENST00000455661 LINC01619G3V211 115 aa10.64□□□□□ -0.71
PTPRE-204ENST00000455661 FANCD2OSQ96PS1 177 aa10.64□□□□□ -0.71
PTPRE-204ENST00000455661 PRO0461Q9UI25 63 aa10.64□□□□□ -0.71
PTPRE-204ENST00000455661 TRBV7-3A0A075B6L6 115 aa10.63□□□□□ -0.71
PTPRE-204ENST00000455661 HOXA3O43365 443 aaPredicted RBP10.63□□□□□ -0.71
PTPRE-204ENST00000455661 APOMO95445 188 aa10.63□□□□□ -0.71
PTPRE-204ENST00000455661 SMAD5-AS1Q9Y6J3 95 aa10.63□□□□□ -0.71
PTPRE-204ENST00000455661 MYMXA0A1B0GTQ4 84 aa10.63□□□□□ -0.71
PTPRE-204ENST00000455661 OR11H12B2RN74 326 aa10.63□□□□□ -0.71
PTPRE-204ENST00000455661 H7C1H1 209 aa10.63□□□□□ -0.71
PTPRE-204ENST00000455661 PRRG2O14669 202 aa10.63□□□□□ -0.71
PTPRE-204ENST00000455661 IGHG4P01861 327 aa10.63□□□□□ -0.71
PTPRE-204ENST00000455661 ERCC8Q13216 396 aa10.63□□□□□ -0.71
PTPRE-204ENST00000455661 MTURNQ8N3F0 131 aa10.63□□□□□ -0.71
PTPRE-204ENST00000455661 OR11H1Q8NG94 326 aa10.63□□□□□ -0.71
PTPRE-204ENST00000455661 OR11H2Q8NH07 326 aa10.63□□□□□ -0.71
PTPRE-204ENST00000455661 PRO3102Q9H379 93 aa10.63□□□□□ -0.71
PTPRE-204ENST00000455661 WDFY4Q6ZS81 3184 aa10.62□□□□□ -0.71
PTPRE-204ENST00000455661 F8W735 103 aaPredicted RBP10.62□□□□□ -0.71
PTPRE-204ENST00000455661 SCGB2A2Q13296 93 aa10.62□□□□□ -0.71
PTPRE-204ENST00000455661 IGFL3Q6UXB1 125 aa10.62□□□□□ -0.71
PTPRE-204ENST00000455661 DYNAPQ8N1N2 210 aa10.62□□□□□ -0.71
PTPRE-204ENST00000455661 NPBQ8NG41 125 aa10.62□□□□□ -0.71
PTPRE-204ENST00000455661 MRAP2Q96G30 205 aa10.62□□□□□ -0.71
PTPRE-204ENST00000455661 GPR179Q6PRD1 2367 aa10.62□□□□□ -0.71
PTPRE-204ENST00000455661 IGHV3-23P01764 117 aa10.62□□□□□ -0.71
PTPRE-204ENST00000455661 SVIPQ8NHG7 77 aa10.62□□□□□ -0.71
PTPRE-204ENST00000455661 CFHR4Q92496 578 aa10.62□□□□□ -0.71
PTPRE-204ENST00000455661 PSMG3-AS1Q96PY0 264 aa10.62□□□□□ -0.71
PTPRE-204ENST00000455661 ONECUT1Q9UBC0 465 aa10.62□□□□□ -0.71
PTPRE-204ENST00000455661 TRAV12-1A0A0B4J245 112 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 A0A0G2JNJ9 132 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 RBAKDNA6NC62 111 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 F8VRH5 84 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 INSL3P51460 131 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 ATP5G2Q06055 141 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 HES1Q14469 280 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 Q6ZS92 163 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 NRACQ8N912 160 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 DPM3Q9P2X0 92 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 Q9UFV3 132 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 UFC1Q9Y3C8 167 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 TRGV3P03979 118 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 C5orf64Q2M2E5 130 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 ZNF672Q499Z4 452 aaPredicted RBP10.61□□□□□ -0.71
PTPRE-204ENST00000455661 IL17RELQ6ZVW7 336 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 ATP6V0E2Q8NHE4 81 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 IGFBPL1Q8WX77 278 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 CLUHP3Q96NS8 147 aa10.61□□□□□ -0.71
PTPRE-204ENST00000455661 ZGRF1Q86YA3 2104 aa10.6□□□□□ -0.71
PTPRE-204ENST00000455661 TMEM238LA0A1B0GVL6 79 aa10.6□□□□□ -0.71
PTPRE-204ENST00000455661 A6NJY4 79 aa10.6□□□□□ -0.71
PTPRE-204ENST00000455661 FOXI1Q12951 378 aa10.6□□□□□ -0.71
PTPRE-204ENST00000455661 MRPL16Q9NX20 251 aaKnown RBP10.6□□□□□ -0.71
PTPRE-204ENST00000455661 TRAV26-2A0A0B4J265 109 aa10.59□□□□□ -0.71
PTPRE-204ENST00000455661 IGKV3D-20A0A0C4DH25 116 aa10.59□□□□□ -0.71
PTPRE-204ENST00000455661 EFNA4P52798 201 aa10.59□□□□□ -0.71
PTPRE-204ENST00000455661 DLX4Q92988 240 aaPredicted RBP10.59□□□□□ -0.71
PTPRE-204ENST00000455661 C1QTNF4Q9BXJ3 329 aa10.59□□□□□ -0.71
PTPRE-204ENST00000455661 PGPEP1Q9NXJ5 209 aa10.59□□□□□ -0.71
PTPRE-204ENST00000455661 CYSLTR1Q9Y271 337 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms