RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 Q8N2B8 174 aa3.92□□□□□ -1.78
HMGB1P4-201ENST00000455362 RPP25LQ8N5L8 163 aaKnown RBP3.92□□□□□ -1.78
HMGB1P4-201ENST00000455362 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P4-201ENST00000455362 ZNF738Q8NE65 137 aa3.92□□□□□ -1.78
HMGB1P4-201ENST00000455362 VN1R17PQ8TDU5 208 aa3.92□□□□□ -1.78
HMGB1P4-201ENST00000455362 TRGV9Q99603 122 aa3.92□□□□□ -1.78
HMGB1P4-201ENST00000455362 RARRES2Q99969 163 aa3.92□□□□□ -1.78
HMGB1P4-201ENST00000455362 GGTLC1Q9BX51 225 aa3.92□□□□□ -1.78
HMGB1P4-201ENST00000455362 VSIRQ9H7M9 311 aa3.92□□□□□ -1.78
HMGB1P4-201ENST00000455362 ZNF702PQ9H963 129 aa3.92□□□□□ -1.78
HMGB1P4-201ENST00000455362 RPRMQ9NS64 109 aa3.92□□□□□ -1.78
HMGB1P4-201ENST00000455362 ZNF355PQ9NSJ1 428 aa3.92□□□□□ -1.78
HMGB1P4-201ENST00000455362 CUBNO60494 3623 aa3.92□□□□□ -1.78
HMGB1P4-201ENST00000455362 TRAV1-1A0A0B4J248 108 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 TCRBV4S1A1TA0A5B7 111 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 ZFP92A6NM28 416 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 H3BUA1 57 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 IGKV1-17P01599 117 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 CTSGP08311 255 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 IGLC1P0CG04 106 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 GATA2P23769 480 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 RAB2AP61019 212 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 SELENOTP62341 195 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 ZNF90Q03938 601 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 ATP5G2Q06055 141 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 C15orf32Q32M92 178 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 NSUN5P1Q3KNT7 163 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 GCSAMLQ5JQS6 135 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 DPPA3Q6W0C5 159 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 CYP2G1PQ6ZSU1 146 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 PRIMA1Q86XR5 153 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 OR10G4Q8NGN3 311 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 OR10G9Q8NGN4 311 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 FAM213BQ8TBF2 198 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 ZNF418Q8TF45 676 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 MBD3L1Q8WWY6 194 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 C1QTNF4Q9BXJ3 329 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 KCNIP2Q9NS61 270 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 SLC39A9Q9NUM3 307 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 MED9Q9NWA0 146 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 C21orf62Q9NYP8 219 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 PXMP4Q9Y6I8 212 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 S4R3C0 116 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 STAB1Q9NY15 2570 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 COL6A5A8TX70 2615 aa3.91□□□□□ -1.78
HMGB1P4-201ENST00000455362 TRAV30A0A087WSZ9 112 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 TRBV7-1A0A0A6YYK4 115 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 FAM223BA6NKX1 122 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 K7EQG2 157 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 IGHV3-23P01764 117 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 TRGV3P03979 118 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 PSMB8P28062 276 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 TPPP2P59282 170 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 HILS1P60008 231 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 YPEL3P61236 119 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 RBX1P62877 108 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 PAFAH1B2P68402 229 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 CCL20P78556 96 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 DEFA5Q01523 94 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 ZNF616Q08AN1 781 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 ZNF726P1Q15940 193 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 ACOT6Q3I5F7 207 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 SPSB3Q6PJ21 355 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 PATE2Q6UY27 113 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 ZNF329Q86UD4 541 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 FAM223AQ8IWN6 122 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 SFT2D1Q8WV19 159 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 USMG5Q96IX5 58 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 C19orf24Q9BVV8 132 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 SORL1Q92673 2214 aa3.9□□□□□ -1.79
HMGB1P4-201ENST00000455362 VWFP04275 2813 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 A0A0G2JLM5 398 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 CTXND1A0A1B0GTU2 59 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 WI2-2373I1.2A0A1W2PRP0 233 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 OR2T8A6NH00 312 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 F6UB75 175 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 SMKR1H3BMG3 65 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 GNG7O60262 68 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 HYPMO75409 117 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 CRLF1O75462 422 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 EIF3GO75821 320 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 GCGP01275 180 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 CRYBA1P05813 215 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 CEBPGP53567 150 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 NDUFV3P56181 108 aaKnown RBP3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 RAB4BP61018 213 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 RHOBP62745 196 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 Q56UQ5 140 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 ACTL10Q5JWF8 245 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 SPATA31B1PQ5VZV4 182 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 C10orf99Q6UWK7 81 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 LCN15Q6UWW0 184 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 CLEC19AQ6UXS0 136 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 Q6ZRP5 223 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 Q8WTZ3 238 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 C14orf144Q96I85 54 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 ZNF414Q96IQ9 312 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 PGLYRP4Q96LB8 373 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 C2orf88Q9BSF0 95 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 SCRT1Q9BWW7 348 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms