RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 CRISP2P16562 243 aa9.68□□□□□ -0.86
LYSMD3-202ENST00000453259 IQCF2Q8IXL9 164 aa9.68□□□□□ -0.86
LYSMD3-202ENST00000453259 C12orf45Q8N5I9 185 aaPredicted RBP9.68□□□□□ -0.86
LYSMD3-202ENST00000453259 SLIRPQ9GZT3 109 aaKnown RBP9.68□□□□□ -0.86
LYSMD3-202ENST00000453259 C9orf170A2RU37 121 aa9.67□□□□□ -0.86
LYSMD3-202ENST00000453259 ORM1P02763 201 aa9.67□□□□□ -0.86
LYSMD3-202ENST00000453259 SMR3BP02814 79 aaPredicted RBP9.67□□□□□ -0.86
LYSMD3-202ENST00000453259 SRIP30626 198 aa9.67□□□□□ -0.86
LYSMD3-202ENST00000453259 MGST2Q99735 147 aa9.67□□□□□ -0.86
LYSMD3-202ENST00000453259 MRPL32Q9BYC8 188 aaKnown RBP9.67□□□□□ -0.86
LYSMD3-202ENST00000453259 KLF12Q9Y4X4 402 aa9.67□□□□□ -0.86
LYSMD3-202ENST00000453259 IGLV5-52A0A0A0MRZ9 124 aa9.66□□□□□ -0.86
LYSMD3-202ENST00000453259 TRBV7-9A0A0J9YWB2 115 aa9.66□□□□□ -0.86
LYSMD3-202ENST00000453259 CCNKO75909 580 aa9.66□□□□□ -0.86
LYSMD3-202ENST00000453259 GPX1P07203 203 aa9.66□□□□□ -0.86
LYSMD3-202ENST00000453259 PRB4P10163 310 aaPredicted RBP9.66□□□□□ -0.86
LYSMD3-202ENST00000453259 FUSP35637 526 aaKnown RBP eCLIP9.66□□□□□ -0.86
LYSMD3-202ENST00000453259 CAMLGP49069 296 aa9.66□□□□□ -0.86
LYSMD3-202ENST00000453259 PYDC2Q56P42 97 aa9.66□□□□□ -0.86
LYSMD3-202ENST00000453259 C9orf47Q6ZRZ4 202 aa9.66□□□□□ -0.86
LYSMD3-202ENST00000453259 SH2D6Q7Z4S9 175 aa9.66□□□□□ -0.86
LYSMD3-202ENST00000453259 PCNPQ8WW12 178 aaKnown RBP9.66□□□□□ -0.86
LYSMD3-202ENST00000453259 ARPC5LQ9BPX5 153 aa9.66□□□□□ -0.86
LYSMD3-202ENST00000453259 TMEM14CQ9P0S9 112 aa9.66□□□□□ -0.86
LYSMD3-202ENST00000453259 TNFRSF18Q9Y5U5 241 aa9.66□□□□□ -0.86
LYSMD3-202ENST00000453259 TRBV19A0A075B6N1 114 aa9.65□□□□□ -0.86
LYSMD3-202ENST00000453259 H3BTX0 84 aa9.65□□□□□ -0.86
LYSMD3-202ENST00000453259 RGS13O14921 159 aa9.65□□□□□ -0.86
LYSMD3-202ENST00000453259 NOL3O60936 208 aaKnown RBP9.65□□□□□ -0.86
LYSMD3-202ENST00000453259 SNRPCP09234 159 aaKnown RBP9.65□□□□□ -0.86
LYSMD3-202ENST00000453259 HIST1H1EP10412 219 aaKnown RBP9.65□□□□□ -0.86
LYSMD3-202ENST00000453259 ZNF415Q09FC8 603 aa9.65□□□□□ -0.86
LYSMD3-202ENST00000453259 FHL2Q14192 279 aa9.65□□□□□ -0.86
LYSMD3-202ENST00000453259 MORN5Q5VZ52 161 aa9.65□□□□□ -0.86
LYSMD3-202ENST00000453259 TXNDC17Q9BRA2 123 aa9.65□□□□□ -0.86
LYSMD3-202ENST00000453259 MDFICQ9P1T7 246 aa9.65□□□□□ -0.86
LYSMD3-202ENST00000453259 IGHV1OR15-1A0A075B7D0 117 aa9.64□□□□□ -0.87
LYSMD3-202ENST00000453259 TRAV5A0A0B4J249 113 aa9.64□□□□□ -0.87
LYSMD3-202ENST00000453259 NAP1L6A6NFF2 107 aa9.64□□□□□ -0.87
LYSMD3-202ENST00000453259 K7EQD1 137 aa9.64□□□□□ -0.87
LYSMD3-202ENST00000453259 PLA2G1BP04054 148 aaKnown RBP9.64□□□□□ -0.87
LYSMD3-202ENST00000453259 RNASE4P34096 147 aaKnown RBP9.64□□□□□ -0.87
LYSMD3-202ENST00000453259 TIRAPP58753 221 aa9.64□□□□□ -0.87
LYSMD3-202ENST00000453259 CD300CQ08708 224 aa9.64□□□□□ -0.87
LYSMD3-202ENST00000453259 BTN1A1Q13410 526 aa9.64□□□□□ -0.87
LYSMD3-202ENST00000453259 IAH1Q2TAA2 248 aaPredicted RBP9.64□□□□□ -0.87
LYSMD3-202ENST00000453259 TMEM78Q5T7P6 136 aa9.64□□□□□ -0.87
LYSMD3-202ENST00000453259 C8orf49Q96NF6 230 aa9.64□□□□□ -0.87
LYSMD3-202ENST00000453259 SRRQ9GZT4 340 aa9.64□□□□□ -0.87
LYSMD3-202ENST00000453259 AAMDCQ9H7C9 122 aa9.64□□□□□ -0.87
LYSMD3-202ENST00000453259 RCL1Q9Y2P8 373 aaKnown RBP9.64□□□□□ -0.87
LYSMD3-202ENST00000453259 TRGV4A0A0C4DH28 118 aa9.63□□□□□ -0.87
LYSMD3-202ENST00000453259 C7orf66A4D0T2 115 aa9.63□□□□□ -0.87
LYSMD3-202ENST00000453259 KRTAP29-1A8MX34 341 aaPredicted RBP9.63□□□□□ -0.87
LYSMD3-202ENST00000453259 C9JCJ5 164 aa9.63□□□□□ -0.87
LYSMD3-202ENST00000453259 PSCAO43653 123 aa9.63□□□□□ -0.87
LYSMD3-202ENST00000453259 PRAF2O60831 178 aa9.63□□□□□ -0.87
LYSMD3-202ENST00000453259 NDUFB6O95139 128 aa9.63□□□□□ -0.87
LYSMD3-202ENST00000453259 CRYGDP07320 174 aa9.63□□□□□ -0.87
LYSMD3-202ENST00000453259 WFDC10BQ8IUB3 73 aa9.63□□□□□ -0.87
LYSMD3-202ENST00000453259 OR10G4Q8NGN3 311 aa9.63□□□□□ -0.87
LYSMD3-202ENST00000453259 CHAC2Q8WUX2 184 aa9.63□□□□□ -0.87
LYSMD3-202ENST00000453259 AGPAT4-IT1Q9H0P7 198 aa9.63□□□□□ -0.87
LYSMD3-202ENST00000453259 MRPL16Q9NX20 251 aaKnown RBP9.63□□□□□ -0.87
LYSMD3-202ENST00000453259 V9GYH0 126 aa9.63□□□□□ -0.87
LYSMD3-202ENST00000453259 M0R3E3 92 aa9.62□□□□□ -0.87
LYSMD3-202ENST00000453259 SCGB1D2O95969 90 aa9.62□□□□□ -0.87
LYSMD3-202ENST00000453259 IGHV3-53P01767 116 aa9.62□□□□□ -0.87
LYSMD3-202ENST00000453259 RPL29P47914 159 aaKnown RBP9.62□□□□□ -0.87
LYSMD3-202ENST00000453259 ARL16Q0P5N6 197 aa9.62□□□□□ -0.87
LYSMD3-202ENST00000453259 SERTAD4-AS1Q5TG53 156 aa9.62□□□□□ -0.87
LYSMD3-202ENST00000453259 NRARPQ7Z6K4 114 aa9.62□□□□□ -0.87
LYSMD3-202ENST00000453259 ZFAND2AQ8N6M9 145 aa9.62□□□□□ -0.87
LYSMD3-202ENST00000453259 SPXQ9BT56 116 aa9.62□□□□□ -0.87
LYSMD3-202ENST00000453259 C20orf85Q9H1P6 137 aa9.62□□□□□ -0.87
LYSMD3-202ENST00000453259 UQCC1Q9NVA1 299 aa9.62□□□□□ -0.87
LYSMD3-202ENST00000453259 WDR83OSQ9Y284 106 aa9.62□□□□□ -0.87
LYSMD3-202ENST00000453259 TIMM9Q9Y5J7 89 aa9.62□□□□□ -0.87
LYSMD3-202ENST00000453259 LRCOL1A6NCL2 159 aa9.61□□□□□ -0.87
LYSMD3-202ENST00000453259 L7N2F9 121 aa9.61□□□□□ -0.87
LYSMD3-202ENST00000453259 S100A5P33763 92 aa9.61□□□□□ -0.87
LYSMD3-202ENST00000453259 VAMP2P63027 116 aa9.61□□□□□ -0.87
LYSMD3-202ENST00000453259 ERCC8Q13216 396 aa9.61□□□□□ -0.87
LYSMD3-202ENST00000453259 VWC2Q2TAL6 325 aa9.61□□□□□ -0.87
LYSMD3-202ENST00000453259 CNPY1Q3B7I2 92 aa9.61□□□□□ -0.87
LYSMD3-202ENST00000453259 DEFB104AQ8WTQ1 72 aa9.61□□□□□ -0.87
LYSMD3-202ENST00000453259 RASL10AQ92737 203 aa9.61□□□□□ -0.87
LYSMD3-202ENST00000453259 SLC39A9Q9NUM3 307 aa9.61□□□□□ -0.87
LYSMD3-202ENST00000453259 TP53TG3Q9ULZ0 132 aa9.61□□□□□ -0.87
LYSMD3-202ENST00000453259 H3BMQ9 156 aa9.6□□□□□ -0.87
LYSMD3-202ENST00000453259 NDUFB4O95168 129 aa9.6□□□□□ -0.87
LYSMD3-202ENST00000453259 LINC01556Q5JQF7 62 aa9.6□□□□□ -0.87
LYSMD3-202ENST00000453259 MIC13Q5XKP0 118 aa9.6□□□□□ -0.87
LYSMD3-202ENST00000453259 Q8N814 137 aa9.6□□□□□ -0.87
LYSMD3-202ENST00000453259 MITD1Q8WV92 249 aa9.6□□□□□ -0.87
LYSMD3-202ENST00000453259 ZNF492Q9P255 531 aa9.6□□□□□ -0.87
LYSMD3-202ENST00000453259 IGHV3-38A0A0C4DH36 116 aa9.59□□□□□ -0.87
LYSMD3-202ENST00000453259 E5RGE8 158 aa9.59□□□□□ -0.87
LYSMD3-202ENST00000453259 MBPP02686 304 aaPredicted RBP9.59□□□□□ -0.87
LYSMD3-202ENST00000453259 GYPEP15421 78 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms