RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.76□□□□□ -1.97
LINC00393-202ENST00000452852 TRAV1-2A0A0B4J238 106 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 IZUMO1RA6ND01 250 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 IFITM5A6NNB3 132 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 PPP5D1E7EU14 171 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 J3QRK9 145 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 MFNGO00587 321 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 TCAPO15273 167 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 HRASP01112 189 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 PRH1P02810 166 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 ZNF688P0C7X2 276 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 SAA1P0DJI8 122 aaPredicted RBP2.76□□□□□ -1.97
LINC00393-202ENST00000452852 HIST1H1BP16401 226 aaKnown RBP2.76□□□□□ -1.97
LINC00393-202ENST00000452852 M6PRP20645 277 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 RPL27AP46776 148 aaKnown RBP2.76□□□□□ -1.97
LINC00393-202ENST00000452852 HSPA13P48723 471 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 AQP4P55087 323 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 GNG2P59768 71 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 ARPC4P59998 168 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 RNASE13Q5GAN3 156 aaKnown RBP2.76□□□□□ -1.97
LINC00393-202ENST00000452852 HACD4Q5VWC8 232 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 Q6ZS49 121 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 H1FOOQ8IZA3 346 aaPredicted RBP2.76□□□□□ -1.97
LINC00393-202ENST00000452852 TMEM256Q8N2U0 113 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 LINC00337Q8N6G1 96 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 CYB561D1Q8N8Q1 229 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 DYNC2LI1Q8TCX1 351 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 FMC1Q96HJ9 113 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 CNBD2Q96M20 576 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 OR2A7Q96R45 310 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 RSG1Q9BU20 258 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 OR51E2Q9H255 320 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 DUSP21Q9H596 190 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 ZNF430Q9H8G1 570 aaPredicted RBP2.76□□□□□ -1.97
LINC00393-202ENST00000452852 HRASLSQ9HDD0 168 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 DIABLOQ9NR28 239 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 TENM3Q9P273 2699 aa2.76□□□□□ -1.97
LINC00393-202ENST00000452852 ALMS1Q8TCU4 4167 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 LOC102724200A0A096LPH7 203 aaPredicted RBP2.75□□□□□ -1.97
LINC00393-202ENST00000452852 TRBV7-1A0A0A6YYK4 115 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 TRDV1A0A1B0GX56 115 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 TMEM235A6NFC5 223 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 C2orf70A6NJV1 201 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 LGALS9O00182 355 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 BPY2O14599 106 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 CRXO43186 299 aaPredicted RBP2.75□□□□□ -1.97
LINC00393-202ENST00000452852 CD7P09564 240 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 CBLN1P23435 193 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 NFYAP23511 347 aaPredicted RBP2.75□□□□□ -1.97
LINC00393-202ENST00000452852 CATR1Q13166 79 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 DEFB114Q30KQ6 69 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 C2orf83Q53S99 150 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 C10orf55Q5SWW7 151 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 LAMTOR1Q6IAA8 161 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 PRNTQ86SH4 94 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 GPHB5Q86YW7 130 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 KRTAP11-1Q8IUC1 163 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 TTC9CQ8N5M4 171 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 DEFB125Q8N687 156 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 OR4A5Q8NH83 315 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 CIRBP-AS1Q8TBR5 109 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 ENKURQ8TC29 256 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 BORCS5Q969J3 196 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 MRAP2Q96G30 205 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 TMEM56Q96MV1 263 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 FAM210AQ96ND0 272 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 COMMD5Q9GZQ3 224 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 DCSTAMPQ9H295 470 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 NDUFB11Q9NX14 153 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 TAS2R8Q9NYW2 309 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 SSR3Q9UNL2 185 aa2.75□□□□□ -1.97
LINC00393-202ENST00000452852 RYR2Q92736 4967 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 HYDINQ4G0P3 5121 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 PLECQ15149 4684 aaKnown RBP2.74□□□□□ -1.97
LINC00393-202ENST00000452852 FRAS1Q86XX4 4008 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 TMEM223A0PJW6 202 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 NUPR2A6NF83 97 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 HLA-AP01891 365 aaKnown RBP2.74□□□□□ -1.97
LINC00393-202ENST00000452852 HLA-DQA1P01909 254 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 HLA-DQB1P01920 261 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 REG1AP05451 166 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 PVALBP20472 110 aaPredicted RBP2.74□□□□□ -1.97
LINC00393-202ENST00000452852 PSMB9P28065 219 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 TSPOP30536 169 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 CDC34P49427 236 aaPredicted RBP2.74□□□□□ -1.97
LINC00393-202ENST00000452852 CMC4P56277 68 aaPredicted RBP2.74□□□□□ -1.97
LINC00393-202ENST00000452852 FXYD4P59646 89 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 RPL30P62888 115 aaKnown RBP2.74□□□□□ -1.97
LINC00393-202ENST00000452852 IZUMO2Q6UXV1 221 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 TMEM167AQ8TBQ9 72 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 NARS2Q96I59 477 aaKnown RBP2.74□□□□□ -1.97
LINC00393-202ENST00000452852 NDFIP1Q9BT67 221 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 C6orf62Q9GZU0 229 aaPredicted RBP2.74□□□□□ -1.97
LINC00393-202ENST00000452852 WFDC10AQ9H1F0 79 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 Q9H521 79 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 SLC2A9Q9NRM0 540 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 BET1LQ9NYM9 111 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 KLK5Q9Y337 293 aaPredicted RBP2.74□□□□□ -1.97
LINC00393-202ENST00000452852 UFC1Q9Y3C8 167 aa2.74□□□□□ -1.97
LINC00393-202ENST00000452852 S4R3C0 116 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms