RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 C1orf158Q8N1D5 194 aa8.65□□□□□ -1.02
AC004540.1-204ENST00000449537 OR2G3Q8NGZ4 309 aa8.65□□□□□ -1.02
AC004540.1-204ENST00000449537 NPCDR1Q9BY65 106 aa8.65□□□□□ -1.02
AC004540.1-204ENST00000449537 WFDC1Q9HC57 220 aa8.65□□□□□ -1.02
AC004540.1-204ENST00000449537 SEPSECSQ9HD40 501 aaKnown RBP8.65□□□□□ -1.02
AC004540.1-204ENST00000449537 MED9Q9NWA0 146 aa8.65□□□□□ -1.02
AC004540.1-204ENST00000449537 IGKV1D-37A0A075B6S9 117 aa8.64□□□□□ -1.03
AC004540.1-204ENST00000449537 IGKV1OR2-108A0A075B7D4 117 aa8.64□□□□□ -1.03
AC004540.1-204ENST00000449537 AGPAT2O15120 278 aa8.64□□□□□ -1.03
AC004540.1-204ENST00000449537 NMBP08949 121 aa8.64□□□□□ -1.03
AC004540.1-204ENST00000449537 DNAH10OSP0CZ25 163 aa8.64□□□□□ -1.03
AC004540.1-204ENST00000449537 RD3LP0DJH9 198 aa8.64□□□□□ -1.03
AC004540.1-204ENST00000449537 ATP6V0CP27449 155 aa8.64□□□□□ -1.03
AC004540.1-204ENST00000449537 PLP1P60201 277 aa8.64□□□□□ -1.03
AC004540.1-204ENST00000449537 SERF2P84101 59 aa8.64□□□□□ -1.03
AC004540.1-204ENST00000449537 ESRGQ1W209 222 aa8.64□□□□□ -1.03
AC004540.1-204ENST00000449537 TMEM182Q6ZP80 229 aaPredicted RBP8.64□□□□□ -1.03
AC004540.1-204ENST00000449537 PFDN5Q99471 154 aa8.64□□□□□ -1.03
AC004540.1-204ENST00000449537 MRPL36Q9P0J6 103 aaKnown RBP8.64□□□□□ -1.03
AC004540.1-204ENST00000449537 LRP1Q07954 4544 aaKnown RBP8.63□□□□□ -1.03
AC004540.1-204ENST00000449537 CBY3A6NI87 242 aa8.63□□□□□ -1.03
AC004540.1-204ENST00000449537 Q6ZRG5 221 aa8.63□□□□□ -1.03
AC004540.1-204ENST00000449537 OR1L4Q8NGR5 311 aa8.63□□□□□ -1.03
AC004540.1-204ENST00000449537 RNF125Q96EQ8 232 aa8.63□□□□□ -1.03
AC004540.1-204ENST00000449537 MGST2Q99735 147 aa8.63□□□□□ -1.03
AC004540.1-204ENST00000449537 MRPS16Q9Y3D3 137 aaKnown RBP8.63□□□□□ -1.03
AC004540.1-204ENST00000449537 IL4P05112 153 aa8.62□□□□□ -1.03
AC004540.1-204ENST00000449537 LINC00869P0C866 280 aa8.62□□□□□ -1.03
AC004540.1-204ENST00000449537 PSG1P11464 419 aa8.62□□□□□ -1.03
AC004540.1-204ENST00000449537 B2MP61769 119 aa8.62□□□□□ -1.03
AC004540.1-204ENST00000449537 MLANAQ16655 118 aa8.62□□□□□ -1.03
AC004540.1-204ENST00000449537 TIGITQ495A1 244 aa8.62□□□□□ -1.03
AC004540.1-204ENST00000449537 GDF5OSQ5U4N7 250 aa8.62□□□□□ -1.03
AC004540.1-204ENST00000449537 OR4B1Q8NGF8 309 aa8.62□□□□□ -1.03
AC004540.1-204ENST00000449537 TMEM208Q9BTX3 173 aa8.62□□□□□ -1.03
AC004540.1-204ENST00000449537 PXMP4Q9Y6I8 212 aa8.62□□□□□ -1.03
AC004540.1-204ENST00000449537 ACOT6Q3I5F7 207 aaPredicted RBP8.61□□□□□ -1.03
AC004540.1-204ENST00000449537 NFE4Q86UQ8 179 aa8.61□□□□□ -1.03
AC004540.1-204ENST00000449537 LINC00528Q8N1L1 170 aa8.61□□□□□ -1.03
AC004540.1-204ENST00000449537 FAM213BQ8TBF2 198 aa8.61□□□□□ -1.03
AC004540.1-204ENST00000449537 CLUHP3Q96NS8 147 aa8.61□□□□□ -1.03
AC004540.1-204ENST00000449537 SLC35B3Q9H1N7 401 aa8.61□□□□□ -1.03
AC004540.1-204ENST00000449537 SH3BGRL3Q9H299 93 aa8.61□□□□□ -1.03
AC004540.1-204ENST00000449537 SLC39A9Q9NUM3 307 aa8.61□□□□□ -1.03
AC004540.1-204ENST00000449537 TNFRSF18Q9Y5U5 241 aa8.61□□□□□ -1.03
AC004540.1-204ENST00000449537 LYZP61626 148 aa8.6□□□□□ -1.03
AC004540.1-204ENST00000449537 PSG9Q00887 426 aa8.6□□□□□ -1.03
AC004540.1-204ENST00000449537 ZNF90Q03938 601 aa8.6□□□□□ -1.03
AC004540.1-204ENST00000449537 C1orf194Q5T5A4 169 aa8.6□□□□□ -1.03
AC004540.1-204ENST00000449537 SAMD13Q5VXD3 122 aa8.6□□□□□ -1.03
AC004540.1-204ENST00000449537 UQCC3Q6UW78 93 aa8.6□□□□□ -1.03
AC004540.1-204ENST00000449537 C16orf54Q6UWD8 224 aa8.6□□□□□ -1.03
AC004540.1-204ENST00000449537 SLC7A5P1Q8MH63 180 aa8.6□□□□□ -1.03
AC004540.1-204ENST00000449537 RXFP4Q8TDU9 374 aa8.6□□□□□ -1.03
AC004540.1-204ENST00000449537 GPR82Q96P67 336 aa8.6□□□□□ -1.03
AC004540.1-204ENST00000449537 PBDC1Q9BVG4 233 aa8.6□□□□□ -1.03
AC004540.1-204ENST00000449537 MRPL32Q9BYC8 188 aaKnown RBP8.6□□□□□ -1.03
AC004540.1-204ENST00000449537 NRN1Q9NPD7 142 aa8.6□□□□□ -1.03
AC004540.1-204ENST00000449537 RAB19A4D1S5 217 aa8.59□□□□□ -1.03
AC004540.1-204ENST00000449537 ZNF705GA8MUZ8 300 aaPredicted RBP8.59□□□□□ -1.03
AC004540.1-204ENST00000449537 COX7A2P2O60397 106 aa8.59□□□□□ -1.03
AC004540.1-204ENST00000449537 HYPMO75409 117 aa8.59□□□□□ -1.03
AC004540.1-204ENST00000449537 DEFB1P60022 68 aa8.59□□□□□ -1.03
AC004540.1-204ENST00000449537 OR5I1Q13606 314 aa8.59□□□□□ -1.03
AC004540.1-204ENST00000449537 FFAR4Q5NUL3 377 aa8.59□□□□□ -1.03
AC004540.1-204ENST00000449537 PCNPQ8WW12 178 aaKnown RBP8.59□□□□□ -1.03
AC004540.1-204ENST00000449537 GLMPQ8WWB7 406 aa8.59□□□□□ -1.03
AC004540.1-204ENST00000449537 RSG1Q9BU20 258 aa8.59□□□□□ -1.03
AC004540.1-204ENST00000449537 KRTAP9-2Q9BYQ4 174 aa8.59□□□□□ -1.03
AC004540.1-204ENST00000449537 SAV1Q9H4B6 383 aaPredicted RBP8.59□□□□□ -1.03
AC004540.1-204ENST00000449537 FAM30AQ9NZY2 134 aa8.59□□□□□ -1.03
AC004540.1-204ENST00000449537 HIGD1AQ9Y241 93 aa8.59□□□□□ -1.03
AC004540.1-204ENST00000449537 U3KQE9 123 aa8.59□□□□□ -1.03
AC004540.1-204ENST00000449537 TRAV26-1A0A087WT03 109 aa8.58□□□□□ -1.04
AC004540.1-204ENST00000449537 IGLV5-52A0A0A0MRZ9 124 aa8.58□□□□□ -1.04
AC004540.1-204ENST00000449537 IFNA1P01562 189 aa8.58□□□□□ -1.04
AC004540.1-204ENST00000449537 PRM2P04554 102 aa8.58□□□□□ -1.04
AC004540.1-204ENST00000449537 H2AFB1P0C5Y9 115 aa8.58□□□□□ -1.04
AC004540.1-204ENST00000449537 M6PRP20645 277 aa8.58□□□□□ -1.04
AC004540.1-204ENST00000449537 MEOX2P50222 304 aa8.58□□□□□ -1.04
AC004540.1-204ENST00000449537 MIC13Q5XKP0 118 aa8.58□□□□□ -1.04
AC004540.1-204ENST00000449537 FOXI2Q6ZQN5 318 aa8.58□□□□□ -1.04
AC004540.1-204ENST00000449537 LINC00052Q96N35 136 aa8.58□□□□□ -1.04
AC004540.1-204ENST00000449537 ACTR3CQ9C0K3 210 aaPredicted RBP8.58□□□□□ -1.04
AC004540.1-204ENST00000449537 H3BRN7 92 aa8.57□□□□□ -1.04
AC004540.1-204ENST00000449537 SIVA1O15304 175 aa8.57□□□□□ -1.04
AC004540.1-204ENST00000449537 OR5G3P0C626 314 aa8.57□□□□□ -1.04
AC004540.1-204ENST00000449537 TAS2R45P59539 299 aa8.57□□□□□ -1.04
AC004540.1-204ENST00000449537 RHOBP62745 196 aa8.57□□□□□ -1.04
AC004540.1-204ENST00000449537 C10orf113Q5VZT2 155 aa8.57□□□□□ -1.04
AC004540.1-204ENST00000449537 EIF4E3Q8N5X7 224 aaKnown RBP8.57□□□□□ -1.04
AC004540.1-204ENST00000449537 OR1B1Q8NGR6 318 aa8.57□□□□□ -1.04
AC004540.1-204ENST00000449537 SHANK2-AS3Q9BTD1 123 aa8.57□□□□□ -1.04
AC004540.1-204ENST00000449537 A0A0J9YY99 117 aa8.56□□□□□ -1.04
AC004540.1-204ENST00000449537 CTXND1A0A1B0GTU2 59 aa8.56□□□□□ -1.04
AC004540.1-204ENST00000449537 A0A1W2PPV4 95 aa8.56□□□□□ -1.04
AC004540.1-204ENST00000449537 RPL7P18124 248 aaKnown RBP8.56□□□□□ -1.04
AC004540.1-204ENST00000449537 ORM2P19652 201 aa8.56□□□□□ -1.04
AC004540.1-204ENST00000449537 TAGLN2P37802 199 aaKnown RBP8.56□□□□□ -1.04
AC004540.1-204ENST00000449537 PPT1P50897 306 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms