RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 LINC00614P0C842 121 aa13.12□□□□□ -0.31
CDKN1A-204ENST00000448526 PPIFP30405 207 aaKnown RBP13.12□□□□□ -0.31
CDKN1A-204ENST00000448526 BLCAPP62952 87 aa13.12□□□□□ -0.31
CDKN1A-204ENST00000448526 LINC00173Q6ZV60 143 aa13.12□□□□□ -0.31
CDKN1A-204ENST00000448526 ATOH7Q8N100 152 aa13.12□□□□□ -0.31
CDKN1A-204ENST00000448526 CHCHD1Q96BP2 118 aaKnown RBP13.12□□□□□ -0.31
CDKN1A-204ENST00000448526 MIEN1Q9BRT3 115 aa13.12□□□□□ -0.31
CDKN1A-204ENST00000448526 A0A1B0GW15 77 aa13.11□□□□□ -0.31
CDKN1A-204ENST00000448526 IGHG2P01859 326 aa13.11□□□□□ -0.31
CDKN1A-204ENST00000448526 ZNF705AQ6ZN79 300 aaPredicted RBP13.11□□□□□ -0.31
CDKN1A-204ENST00000448526 SLC50A1Q9BRV3 221 aa13.11□□□□□ -0.31
CDKN1A-204ENST00000448526 FBN2P35556 2912 aa13.11□□□□□ -0.31
CDKN1A-204ENST00000448526 CSPG4Q6UVK1 2322 aa13.11□□□□□ -0.31
CDKN1A-204ENST00000448526 ZNF493Q6ZR52 646 aa13.1□□□□□ -0.31
CDKN1A-204ENST00000448526 CSN3P07498 182 aa13.1□□□□□ -0.31
CDKN1A-204ENST00000448526 ARL3P36405 182 aa13.1□□□□□ -0.31
CDKN1A-204ENST00000448526 MAJINQ3KP22 176 aa13.1□□□□□ -0.31
CDKN1A-204ENST00000448526 SPATA45Q537H7 98 aa13.1□□□□□ -0.31
CDKN1A-204ENST00000448526 UNQ9165/PRO28630Q6UXU0 137 aa13.1□□□□□ -0.31
CDKN1A-204ENST00000448526 C8orf86Q6ZUL3 223 aa13.1□□□□□ -0.31
CDKN1A-204ENST00000448526 IL17RELQ6ZVW7 336 aa13.1□□□□□ -0.31
CDKN1A-204ENST00000448526 BBC3Q96PG8 261 aaPredicted RBP13.1□□□□□ -0.31
CDKN1A-204ENST00000448526 KLK15Q9H2R5 256 aa13.1□□□□□ -0.31
CDKN1A-204ENST00000448526 BTF3P20290 206 aaKnown RBP13.09□□□□□ -0.31
CDKN1A-204ENST00000448526 BMI1P35226 326 aa13.09□□□□□ -0.31
CDKN1A-204ENST00000448526 ATP6V0BQ99437 205 aa13.09□□□□□ -0.31
CDKN1A-204ENST00000448526 AGPAT4-IT1Q9H0P7 198 aa13.09□□□□□ -0.31
CDKN1A-204ENST00000448526 B4DSR2 109 aa13.09□□□□□ -0.31
CDKN1A-204ENST00000448526 IGLC6P0CF74 106 aa13.09□□□□□ -0.31
CDKN1A-204ENST00000448526 LCNL1Q6ZST4 164 aa13.09□□□□□ -0.31
CDKN1A-204ENST00000448526 ZNF462Q96JM2 2506 aa13.09□□□□□ -0.31
CDKN1A-204ENST00000448526 RBAKDNA6NC62 111 aa13.08□□□□□ -0.32
CDKN1A-204ENST00000448526 RAB4AP20338 218 aa13.08□□□□□ -0.32
CDKN1A-204ENST00000448526 SMAD7O15105 426 aaKnown RBP13.07□□□□□ -0.32
CDKN1A-204ENST00000448526 IGHV3-11P01762 117 aa13.07□□□□□ -0.32
CDKN1A-204ENST00000448526 LBHQ53QV2 105 aaPredicted RBP13.07□□□□□ -0.32
CDKN1A-204ENST00000448526 AMN1Q8IY45 258 aa13.07□□□□□ -0.32
CDKN1A-204ENST00000448526 FER1L6-AS1Q8NA97 138 aa13.07□□□□□ -0.32
CDKN1A-204ENST00000448526 GLMPQ8WWB7 406 aa13.07□□□□□ -0.32
CDKN1A-204ENST00000448526 FABP5P3A8MUU1 101 aa13.07□□□□□ -0.32
CDKN1A-204ENST00000448526 ORM1P02763 201 aa13.07□□□□□ -0.32
CDKN1A-204ENST00000448526 RPS20P60866 119 aaKnown RBP13.06□□□□□ -0.32
CDKN1A-204ENST00000448526 SRSF2Q01130 221 aaKnown RBP13.06□□□□□ -0.32
CDKN1A-204ENST00000448526 FAM104BQ5XKR9 115 aa13.06□□□□□ -0.32
CDKN1A-204ENST00000448526 FAM208BQ5VWN6 2430 aa13.06□□□□□ -0.32
CDKN1A-204ENST00000448526 D6R8Y8 96 aa13.06□□□□□ -0.32
CDKN1A-204ENST00000448526 M0R143 59 aa13.06□□□□□ -0.32
CDKN1A-204ENST00000448526 SRSF1Q07955 248 aaKnown RBP eCLIP13.06□□□□□ -0.32
CDKN1A-204ENST00000448526 TMEM70Q9BUB7 260 aa13.06□□□□□ -0.32
CDKN1A-204ENST00000448526 C11orf21Q9P2W6 132 aa13.06□□□□□ -0.32
CDKN1A-204ENST00000448526 POLQO75417 2590 aa13.05□□□□□ -0.32
CDKN1A-204ENST00000448526 ANKRD17O75179 2603 aaKnown RBP13.05□□□□□ -0.32
CDKN1A-204ENST00000448526 A0A096LNT2 108 aa13.05□□□□□ -0.32
CDKN1A-204ENST00000448526 LEPROTL1O95214 131 aa13.05□□□□□ -0.32
CDKN1A-204ENST00000448526 BRI3O95415 125 aa13.05□□□□□ -0.32
CDKN1A-204ENST00000448526 PF4V1P10720 104 aa13.05□□□□□ -0.32
CDKN1A-204ENST00000448526 GPHB5Q86YW7 130 aa13.05□□□□□ -0.32
CDKN1A-204ENST00000448526 C20orf173Q96LM9 149 aa13.05□□□□□ -0.32
CDKN1A-204ENST00000448526 MSRB1Q9NZV6 116 aa13.05□□□□□ -0.32
CDKN1A-204ENST00000448526 U3KQK5 164 aa13.05□□□□□ -0.32
CDKN1A-204ENST00000448526 USP9YO00507 2555 aaPredicted RBP13.05□□□□□ -0.32
CDKN1A-204ENST00000448526 ZANQ9Y493 2812 aa13.04□□□□□ -0.32
CDKN1A-204ENST00000448526 M0QZK8 103 aa13.04□□□□□ -0.32
CDKN1A-204ENST00000448526 IGLC3P0DOY3 106 aa13.04□□□□□ -0.32
CDKN1A-204ENST00000448526 DSCR9P59020 149 aa13.04□□□□□ -0.32
CDKN1A-204ENST00000448526 TWIST1Q15672 202 aa13.04□□□□□ -0.32
CDKN1A-204ENST00000448526 MRPL51Q4U2R6 128 aaKnown RBP13.04□□□□□ -0.32
CDKN1A-204ENST00000448526 MRPL53Q96EL3 112 aaKnown RBP13.04□□□□□ -0.32
CDKN1A-204ENST00000448526 H3BUA1 57 aa13.04□□□□□ -0.32
CDKN1A-204ENST00000448526 NDUFA4O00483 81 aa13.04□□□□□ -0.32
CDKN1A-204ENST00000448526 LINC01559Q495D7 138 aa13.04□□□□□ -0.32
CDKN1A-204ENST00000448526 FAM106AQ4KMX7 169 aa13.04□□□□□ -0.32
CDKN1A-204ENST00000448526 Q6ZQT7 251 aa13.04□□□□□ -0.32
CDKN1A-204ENST00000448526 MAPK1IP1LQ8NDC0 245 aa13.04□□□□□ -0.32
CDKN1A-204ENST00000448526 USMG5Q96IX5 58 aa13.04□□□□□ -0.32
CDKN1A-204ENST00000448526 IGKV3D-20A0A0C4DH25 116 aa13.03□□□□□ -0.32
CDKN1A-204ENST00000448526 SYS1-DBNDD2H3BUS1 97 aa13.03□□□□□ -0.32
CDKN1A-204ENST00000448526 CRXO43186 299 aaPredicted RBP13.03□□□□□ -0.32
CDKN1A-204ENST00000448526 IGLV1-40P01703 118 aa13.03□□□□□ -0.32
CDKN1A-204ENST00000448526 TMEM95Q3KNT9 176 aa13.03□□□□□ -0.32
CDKN1A-204ENST00000448526 C16orf92Q96LL3 132 aa13.03□□□□□ -0.32
CDKN1A-204ENST00000448526 ZMAT5Q9UDW3 170 aaKnown RBP13.03□□□□□ -0.32
CDKN1A-204ENST00000448526 CENPEQ02224 2701 aa13.03□□□□□ -0.32
CDKN1A-204ENST00000448526 SLC25A16P16260 332 aa13.03□□□□□ -0.32
CDKN1A-204ENST00000448526 IFI27P40305 119 aaPredicted RBP13.03□□□□□ -0.32
CDKN1A-204ENST00000448526 CFHR3Q02985 330 aa13.03□□□□□ -0.32
CDKN1A-204ENST00000448526 C9orf47Q6ZRZ4 202 aa13.03□□□□□ -0.32
CDKN1A-204ENST00000448526 OR4X2Q8NGF9 303 aa13.03□□□□□ -0.32
CDKN1A-204ENST00000448526 LRRK2Q5S007 2527 aa13.02□□□□□ -0.32
CDKN1A-204ENST00000448526 A1L4Q6 167 aa13.02□□□□□ -0.33
CDKN1A-204ENST00000448526 SMKR1H3BMG3 65 aa13.02□□□□□ -0.33
CDKN1A-204ENST00000448526 LOXL1Q08397 574 aaPredicted RBP13.02□□□□□ -0.33
CDKN1A-204ENST00000448526 DEFB112Q30KQ8 113 aa13.02□□□□□ -0.33
CDKN1A-204ENST00000448526 TMEM78Q5T7P6 136 aa13.02□□□□□ -0.33
CDKN1A-204ENST00000448526 DMRTA1Q5VZB9 504 aa13.02□□□□□ -0.33
CDKN1A-204ENST00000448526 LINC00469Q8N7U9 141 aa13.02□□□□□ -0.33
CDKN1A-204ENST00000448526 PRSS3P2Q8NHM4 247 aa13.02□□□□□ -0.33
CDKN1A-204ENST00000448526 PRELID3AQ96N28 172 aa13.02□□□□□ -0.33
CDKN1A-204ENST00000448526 AP5S1Q9NUS5 200 aa13.02□□□□□ -0.33
CDKN1A-204ENST00000448526 UBR5O95071 2799 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms