RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 TMEM78Q5T7P6 136 aa14.15□□□□□ -0.14
LRCH3-208ENST00000443727 PYGO2Q9BRQ0 406 aa14.15□□□□□ -0.14
LRCH3-208ENST00000443727 ATG101Q9BSB4 218 aa14.15□□□□□ -0.14
LRCH3-208ENST00000443727 AGPAT4-IT1Q9H0P7 198 aa14.15□□□□□ -0.14
LRCH3-208ENST00000443727 IGLV2-18A0A075B6J9 118 aa14.14□□□□□ -0.15
LRCH3-208ENST00000443727 IGKV2-40A0A087WW87 121 aaPredicted RBP14.14□□□□□ -0.15
LRCH3-208ENST00000443727 C7orf71A4D174 169 aa14.14□□□□□ -0.15
LRCH3-208ENST00000443727 NUDT3O95989 172 aa14.14□□□□□ -0.15
LRCH3-208ENST00000443727 IGKV2D-40P01614 121 aaPredicted RBP14.14□□□□□ -0.15
LRCH3-208ENST00000443727 RNASE4P34096 147 aaKnown RBP14.14□□□□□ -0.15
LRCH3-208ENST00000443727 FXYD5Q96DB9 178 aa14.14□□□□□ -0.15
LRCH3-208ENST00000443727 ALG5Q9Y673 324 aa14.14□□□□□ -0.15
LRCH3-208ENST00000443727 GPX1P07203 203 aa14.13□□□□□ -0.15
LRCH3-208ENST00000443727 CSN1S1P47710 185 aa14.13□□□□□ -0.15
LRCH3-208ENST00000443727 LINC00336Q6ZUF6 198 aa14.13□□□□□ -0.15
LRCH3-208ENST00000443727 GAGE12BA1L429 117 aa14.12□□□□□ -0.15
LRCH3-208ENST00000443727 GAGE7O76087 117 aa14.12□□□□□ -0.15
LRCH3-208ENST00000443727 GAGE12FP0CL80 117 aa14.12□□□□□ -0.15
LRCH3-208ENST00000443727 GAGE12GP0CL81 117 aa14.12□□□□□ -0.15
LRCH3-208ENST00000443727 GAGE12IP0CL82 117 aa14.12□□□□□ -0.15
LRCH3-208ENST00000443727 TAS2R45P59539 299 aa14.12□□□□□ -0.15
LRCH3-208ENST00000443727 RANP62826 216 aaKnown RBP14.12□□□□□ -0.15
LRCH3-208ENST00000443727 UBE2L3P68036 154 aaKnown RBP14.12□□□□□ -0.15
LRCH3-208ENST00000443727 KHDC3LQ587J8 217 aa14.12□□□□□ -0.15
LRCH3-208ENST00000443727 C9orf47Q6ZRZ4 202 aa14.12□□□□□ -0.15
LRCH3-208ENST00000443727 PHYHIPLQ96FC7 376 aa14.12□□□□□ -0.15
LRCH3-208ENST00000443727 VGLL1Q99990 258 aa14.12□□□□□ -0.15
LRCH3-208ENST00000443727 KLLNB2CW77 178 aa14.11□□□□□ -0.15
LRCH3-208ENST00000443727 PTTG1O95997 202 aa14.11□□□□□ -0.15
LRCH3-208ENST00000443727 CD300CQ08708 224 aa14.11□□□□□ -0.15
LRCH3-208ENST00000443727 BTN1A1Q13410 526 aa14.11□□□□□ -0.15
LRCH3-208ENST00000443727 OR5I1Q13606 314 aa14.11□□□□□ -0.15
LRCH3-208ENST00000443727 LGALS9BQ3B8N2 356 aa14.11□□□□□ -0.15
LRCH3-208ENST00000443727 ZNF680Q8NEM1 530 aa14.1□□□□□ -0.15
LRCH3-208ENST00000443727 FAM19A4Q96LR4 140 aa14.1□□□□□ -0.15
LRCH3-208ENST00000443727 MED28Q9H204 178 aa14.1□□□□□ -0.15
LRCH3-208ENST00000443727 NMBP08949 121 aa14.09□□□□□ -0.15
LRCH3-208ENST00000443727 CRISP2P16562 243 aa14.09□□□□□ -0.15
LRCH3-208ENST00000443727 ZNF138P52744 262 aa14.09□□□□□ -0.15
LRCH3-208ENST00000443727 FAM3BP58499 235 aaPredicted RBP14.09□□□□□ -0.15
LRCH3-208ENST00000443727 ACOT6Q3I5F7 207 aaPredicted RBP14.09□□□□□ -0.15
LRCH3-208ENST00000443727 LYPD1Q8N2G4 141 aa14.09□□□□□ -0.15
LRCH3-208ENST00000443727 EIF4E3Q8N5X7 224 aaKnown RBP14.09□□□□□ -0.15
LRCH3-208ENST00000443727 Q9H3A6 140 aa14.09□□□□□ -0.15
LRCH3-208ENST00000443727 WFDC1Q9HC57 220 aa14.09□□□□□ -0.15
LRCH3-208ENST00000443727 GSN-AS1Q9NRJ2 163 aa14.09□□□□□ -0.15
LRCH3-208ENST00000443727 A0A1W2PPV4 95 aa14.08□□□□□ -0.16
LRCH3-208ENST00000443727 RGS13O14921 159 aa14.08□□□□□ -0.16
LRCH3-208ENST00000443727 ZNF324O75467 553 aaPredicted RBP14.08□□□□□ -0.16
LRCH3-208ENST00000443727 DAZ2Q13117 558 aaKnown RBP14.08□□□□□ -0.16
LRCH3-208ENST00000443727 ZNF503Q96F45 646 aa14.08□□□□□ -0.16
LRCH3-208ENST00000443727 ZNF492Q9P255 531 aa14.08□□□□□ -0.16
LRCH3-208ENST00000443727 TRGV2A0A075B6R0 118 aa14.07□□□□□ -0.16
LRCH3-208ENST00000443727 M6PRP20645 277 aa14.07□□□□□ -0.16
LRCH3-208ENST00000443727 CCL18P55774 89 aa14.07□□□□□ -0.16
LRCH3-208ENST00000443727 Q6ZTI0 123 aa14.07□□□□□ -0.16
LRCH3-208ENST00000443727 LINC00612Q8N6U2 182 aa14.07□□□□□ -0.16
LRCH3-208ENST00000443727 Q8TAT8 98 aa14.07□□□□□ -0.16
LRCH3-208ENST00000443727 GNPNAT1Q96EK6 184 aaPredicted RBP14.07□□□□□ -0.16
LRCH3-208ENST00000443727 TRAV26-1A0A087WT03 109 aa14.06□□□□□ -0.16
LRCH3-208ENST00000443727 EIF3GO75821 320 aaKnown RBP eCLIP14.06□□□□□ -0.16
LRCH3-208ENST00000443727 SOHLH1Q5JUK2 328 aa14.06□□□□□ -0.16
LRCH3-208ENST00000443727 ZFAND2AQ8N6M9 145 aa14.06□□□□□ -0.16
LRCH3-208ENST00000443727 RXFP4Q8TDU9 374 aa14.06□□□□□ -0.16
LRCH3-208ENST00000443727 HYLS1Q96M11 299 aa14.06□□□□□ -0.16
LRCH3-208ENST00000443727 LINC00467Q9BRT7 94 aa14.06□□□□□ -0.16
LRCH3-208ENST00000443727 TRGV1A0A0A0MS02 117 aa14.05□□□□□ -0.16
LRCH3-208ENST00000443727 A0A0J9YY99 117 aa14.05□□□□□ -0.16
LRCH3-208ENST00000443727 PRSS29PA6NIE9 313 aa14.05□□□□□ -0.16
LRCH3-208ENST00000443727 ANXA2RQ3ZCQ2 193 aa14.05□□□□□ -0.16
LRCH3-208ENST00000443727 Q6ZR54 194 aa14.05□□□□□ -0.16
LRCH3-208ENST00000443727 CMTM2Q8TAZ6 248 aa14.05□□□□□ -0.16
LRCH3-208ENST00000443727 ARPC5LQ9BPX5 153 aa14.05□□□□□ -0.16
LRCH3-208ENST00000443727 TMPRSS5Q9H3S3 457 aa14.05□□□□□ -0.16
LRCH3-208ENST00000443727 IGHV1OR15-1A0A075B7D0 117 aa14.04□□□□□ -0.16
LRCH3-208ENST00000443727 RBAKDNA6NC62 111 aa14.04□□□□□ -0.16
LRCH3-208ENST00000443727 RTL8CO15255 209 aa14.04□□□□□ -0.16
LRCH3-208ENST00000443727 HOXA5P20719 270 aa14.04□□□□□ -0.16
LRCH3-208ENST00000443727 RAB2AP61019 212 aa14.04□□□□□ -0.16
LRCH3-208ENST00000443727 ZNF266Q14584 549 aa14.04□□□□□ -0.16
LRCH3-208ENST00000443727 FAM74A1Q5RGS3 127 aa14.04□□□□□ -0.16
LRCH3-208ENST00000443727 PRR9Q5T870 116 aa14.04□□□□□ -0.16
LRCH3-208ENST00000443727 C11orf72Q8NBR9 251 aa14.04□□□□□ -0.16
LRCH3-208ENST00000443727 OR10G4Q8NGN3 311 aa14.04□□□□□ -0.16
LRCH3-208ENST00000443727 OR10G9Q8NGN4 311 aa14.04□□□□□ -0.16
LRCH3-208ENST00000443727 OR10G7Q8NGN6 311 aa14.04□□□□□ -0.16
LRCH3-208ENST00000443727 RPH3ALQ9UNE2 315 aa14.04□□□□□ -0.16
LRCH3-208ENST00000443727 HECTD4Q9Y4D8 3996 aa14.03□□□□□ -0.16
LRCH3-208ENST00000443727 TRBV7-9A0A0J9YWB2 115 aa14.03□□□□□ -0.16
LRCH3-208ENST00000443727 PQLC2Q6ZP29 291 aa14.03□□□□□ -0.16
LRCH3-208ENST00000443727 HSD17B11Q8NBQ5 300 aa14.03□□□□□ -0.16
LRCH3-208ENST00000443727 OTORQ9NRC9 128 aa14.03□□□□□ -0.16
LRCH3-208ENST00000443727 PGPA6NDG6 321 aa14.02□□□□□ -0.17
LRCH3-208ENST00000443727 DIRC3C9JPN6 131 aa14.02□□□□□ -0.17
LRCH3-208ENST00000443727 C1orf134Q5TEV5 83 aa14.02□□□□□ -0.17
LRCH3-208ENST00000443727 KLF12Q9Y4X4 402 aa14.02□□□□□ -0.17
LRCH3-208ENST00000443727 HMGB3O15347 200 aaKnown RBP14.01□□□□□ -0.17
LRCH3-208ENST00000443727 TCL1AP56279 114 aa14.01□□□□□ -0.17
LRCH3-208ENST00000443727 IBA57Q5T440 356 aaKnown RBP14.01□□□□□ -0.17
LRCH3-208ENST00000443727 Q6ZQT7 251 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms