RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 SLC25A5P05141 298 aaKnown RBP13.27□□□□□ -0.29
HMGB3P22-201ENST00000442010 CRISP2P16562 243 aa13.27□□□□□ -0.29
HMGB3P22-201ENST00000442010 Q6ZR54 194 aa13.27□□□□□ -0.29
HMGB3P22-201ENST00000442010 UBE2DNLQ8IWF7 75 aa13.27□□□□□ -0.29
HMGB3P22-201ENST00000442010 PYGO2Q9BRQ0 406 aa13.27□□□□□ -0.29
HMGB3P22-201ENST00000442010 WFDC1Q9HC57 220 aa13.27□□□□□ -0.29
HMGB3P22-201ENST00000442010 ALG5Q9Y673 324 aa13.27□□□□□ -0.29
HMGB3P22-201ENST00000442010 C7orf71A4D174 169 aa13.26□□□□□ -0.29
HMGB3P22-201ENST00000442010 OR10J4P0C629 311 aa13.26□□□□□ -0.29
HMGB3P22-201ENST00000442010 CCDC28AQ8IWP9 274 aa13.26□□□□□ -0.29
HMGB3P22-201ENST00000442010 RNF141Q8WVD5 230 aa13.26□□□□□ -0.29
HMGB3P22-201ENST00000442010 PHYHIPLQ96FC7 376 aa13.26□□□□□ -0.29
HMGB3P22-201ENST00000442010 SMIM3Q9BZL3 60 aa13.26□□□□□ -0.29
HMGB3P22-201ENST00000442010 IGKV2-40A0A087WW87 121 aaPredicted RBP13.25□□□□□ -0.29
HMGB3P22-201ENST00000442010 M0R2N4 97 aa13.25□□□□□ -0.29
HMGB3P22-201ENST00000442010 IGKV2D-40P01614 121 aaPredicted RBP13.25□□□□□ -0.29
HMGB3P22-201ENST00000442010 CD300CQ08708 224 aa13.25□□□□□ -0.29
HMGB3P22-201ENST00000442010 FFAR4Q5NUL3 377 aa13.25□□□□□ -0.29
HMGB3P22-201ENST00000442010 FAM122CQ6P4D5 195 aa13.25□□□□□ -0.29
HMGB3P22-201ENST00000442010 LINC00336Q6ZUF6 198 aa13.25□□□□□ -0.29
HMGB3P22-201ENST00000442010 VGLL1Q99990 258 aa13.25□□□□□ -0.29
HMGB3P22-201ENST00000442010 LINC00467Q9BRT7 94 aa13.25□□□□□ -0.29
HMGB3P22-201ENST00000442010 MUC4Q99102 2169 aa13.25□□□□□ -0.29
HMGB3P22-201ENST00000442010 RTL8CO15255 209 aa13.24□□□□□ -0.29
HMGB3P22-201ENST00000442010 IFNA5P01569 189 aa13.24□□□□□ -0.29
HMGB3P22-201ENST00000442010 NMBP08949 121 aa13.24□□□□□ -0.29
HMGB3P22-201ENST00000442010 BTN1A1Q13410 526 aa13.24□□□□□ -0.29
HMGB3P22-201ENST00000442010 ZFAND2AQ8N6M9 145 aa13.24□□□□□ -0.29
HMGB3P22-201ENST00000442010 C11orf72Q8NBR9 251 aa13.24□□□□□ -0.29
HMGB3P22-201ENST00000442010 ZNF492Q9P255 531 aa13.24□□□□□ -0.29
HMGB3P22-201ENST00000442010 PTTG1O95997 202 aa13.23□□□□□ -0.29
HMGB3P22-201ENST00000442010 DAZ2Q13117 558 aaKnown RBP13.23□□□□□ -0.29
HMGB3P22-201ENST00000442010 PRR9Q5T870 116 aa13.23□□□□□ -0.29
HMGB3P22-201ENST00000442010 SCGB1C1Q8TD33 95 aa13.23□□□□□ -0.29
HMGB3P22-201ENST00000442010 IGLV2-18A0A075B6J9 118 aa13.22□□□□□ -0.29
HMGB3P22-201ENST00000442010 A0A1B0GVY2 172 aa13.22□□□□□ -0.29
HMGB3P22-201ENST00000442010 SNURFLB1AK76 121 aa13.22□□□□□ -0.29
HMGB3P22-201ENST00000442010 OR7C2O60412 319 aa13.22□□□□□ -0.29
HMGB3P22-201ENST00000442010 FAM3BP58499 235 aaPredicted RBP13.22□□□□□ -0.29
HMGB3P22-201ENST00000442010 ANXA2RQ3ZCQ2 193 aa13.22□□□□□ -0.29
HMGB3P22-201ENST00000442010 LYPD1Q8N2G4 141 aa13.22□□□□□ -0.29
HMGB3P22-201ENST00000442010 PKD1P98161 4303 aa13.22□□□□□ -0.29
HMGB3P22-201ENST00000442010 PKHD1P08F94 4074 aa13.22□□□□□ -0.29
HMGB3P22-201ENST00000442010 HOXA5P20719 270 aa13.21□□□□□ -0.29
HMGB3P22-201ENST00000442010 RNASE4P34096 147 aaKnown RBP13.21□□□□□ -0.29
HMGB3P22-201ENST00000442010 RANP62826 216 aaKnown RBP13.21□□□□□ -0.29
HMGB3P22-201ENST00000442010 KHDC3LQ587J8 217 aa13.21□□□□□ -0.29
HMGB3P22-201ENST00000442010 TMEM78Q5T7P6 136 aa13.21□□□□□ -0.29
HMGB3P22-201ENST00000442010 Q6ZQT7 251 aa13.21□□□□□ -0.29
HMGB3P22-201ENST00000442010 Q9H3A6 140 aa13.21□□□□□ -0.29
HMGB3P22-201ENST00000442010 DYNC1H1Q14204 4646 aaKnown RBP13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 TRBV7-9A0A0J9YWB2 115 aa13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 GAGE12BA1L429 117 aa13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 RBAKDNA6NC62 111 aa13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 EIF3GO75821 320 aaKnown RBP eCLIP13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 GAGE7O76087 117 aa13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 NUDT3O95989 172 aa13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 GPX1P07203 203 aa13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 GAGE12FP0CL80 117 aa13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 GAGE12GP0CL81 117 aa13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 GAGE12IP0CL82 117 aa13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 UBE2L3P68036 154 aaKnown RBP13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 Q6ZTI0 123 aa13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 EIF4E3Q8N5X7 224 aaKnown RBP13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 ZNF680Q8NEM1 530 aa13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 GSN-AS1Q9NRJ2 163 aa13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 HERC2O95714 4834 aa13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 DNAH11Q96DT5 4516 aa13.2□□□□□ -0.3
HMGB3P22-201ENST00000442010 ZNF138P52744 262 aa13.19□□□□□ -0.3
HMGB3P22-201ENST00000442010 TAS2R45P59539 299 aa13.19□□□□□ -0.3
HMGB3P22-201ENST00000442010 C18orf15Q96N68 181 aa13.19□□□□□ -0.3
HMGB3P22-201ENST00000442010 DIRC3C9JPN6 131 aa13.18□□□□□ -0.3
HMGB3P22-201ENST00000442010 M6PRP20645 277 aa13.18□□□□□ -0.3
HMGB3P22-201ENST00000442010 ZNRF2Q8NHG8 242 aa13.18□□□□□ -0.3
HMGB3P22-201ENST00000442010 Q8TAT8 98 aa13.18□□□□□ -0.3
HMGB3P22-201ENST00000442010 TRAV26-1A0A087WT03 109 aa13.17□□□□□ -0.3
HMGB3P22-201ENST00000442010 PRSS29PA6NIE9 313 aa13.17□□□□□ -0.3
HMGB3P22-201ENST00000442010 TCL1AP56279 114 aa13.17□□□□□ -0.3
HMGB3P22-201ENST00000442010 RAB2AP61019 212 aa13.17□□□□□ -0.3
HMGB3P22-201ENST00000442010 OR5I1Q13606 314 aa13.17□□□□□ -0.3
HMGB3P22-201ENST00000442010 ACOT6Q3I5F7 207 aaPredicted RBP13.17□□□□□ -0.3
HMGB3P22-201ENST00000442010 Q5BKY6 102 aa13.17□□□□□ -0.3
HMGB3P22-201ENST00000442010 IBA57Q5T440 356 aaKnown RBP13.17□□□□□ -0.3
HMGB3P22-201ENST00000442010 ATG101Q9BSB4 218 aa13.17□□□□□ -0.3
HMGB3P22-201ENST00000442010 MED28Q9H204 178 aa13.17□□□□□ -0.3
HMGB3P22-201ENST00000442010 TMPRSS5Q9H3S3 457 aa13.17□□□□□ -0.3
HMGB3P22-201ENST00000442010 TP53TG3Q9ULZ0 132 aa13.17□□□□□ -0.3
HMGB3P22-201ENST00000442010 LINC00588Q9Y4M8 146 aa13.17□□□□□ -0.3
HMGB3P22-201ENST00000442010 KLF12Q9Y4X4 402 aa13.17□□□□□ -0.3
HMGB3P22-201ENST00000442010 KIAA1109Q2LD37 5005 aa13.16□□□□□ -0.3
HMGB3P22-201ENST00000442010 IGHV1OR15-1A0A075B7D0 117 aa13.16□□□□□ -0.3
HMGB3P22-201ENST00000442010 SPINK4O60575 86 aa13.16□□□□□ -0.3
HMGB3P22-201ENST00000442010 CSN1S1P47710 185 aa13.16□□□□□ -0.3
HMGB3P22-201ENST00000442010 RXFP4Q8TDU9 374 aa13.16□□□□□ -0.3
HMGB3P22-201ENST00000442010 AQP10Q96PS8 301 aa13.16□□□□□ -0.3
HMGB3P22-201ENST00000442010 OTORQ9NRC9 128 aa13.16□□□□□ -0.3
HMGB3P22-201ENST00000442010 H3BNG1 76 aa13.15□□□□□ -0.3
HMGB3P22-201ENST00000442010 CCL18P55774 89 aa13.15□□□□□ -0.3
HMGB3P22-201ENST00000442010 ZNF266Q14584 549 aa13.15□□□□□ -0.3
HMGB3P22-201ENST00000442010 PQLC2Q6ZP29 291 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms