RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 CKLFQ9UBR5 152 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 CACFD1Q9UGQ2 172 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 LSM2Q9Y333 95 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 FLNBO75369 2602 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 C4AP0C0L4 1744 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 ZFC3H1O60293 1989 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 MCM3APO60318 1980 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 TRAV1-1A0A0B4J248 108 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 A6NDX4 124 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 MCRIP1C9JLW8 97 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 H3BT86 120 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 K7ERJ3 54 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 UBE2L6O14933 153 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 SLC37A4O43826 429 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 COX7A2P2O60397 106 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 SLC25A4P12235 298 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 HLA-DRB4P13762 266 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 LGALS3P17931 250 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 DSCR10P59022 87 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 GABARAPL2P60520 117 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 BVES-AS1Q5T3Y7 98 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 LGALS9CQ6DKI2 356 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 TMEM91Q6ZNR0 172 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 Q8N9W7 124 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 OR8A1Q8NGG7 326 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 VSTM2AQ8TAG5 236 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 FAM104AQ969W3 186 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 ST20Q9HBF5 79 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 HHLA3Q9XRX5 114 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 DNAJC15Q9Y5T4 150 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 HLA-DRB4X5D2U9 266 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 USP34Q70CQ2 3546 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 C4BP0C0L5 1744 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 MON2Q7Z3U7 1717 aa2.78□□□□□ -1.96
CDC42BPA-207ENST00000441725 TRPM6Q9BX84 2022 aa2.78□□□□□ -1.97
CDC42BPA-207ENST00000441725 E9PCH4 1651 aa2.78□□□□□ -1.97
CDC42BPA-207ENST00000441725 WDFY4Q6ZS81 3184 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 IGKV6-21A0A0C4DH24 114 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 IRGMA1A4Y4 181 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 IGKV1-5P01602 117 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 UBE2AP49459 152 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 POLR2JP52435 117 aaKnown RBP2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 ADIRFQ15847 76 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 Q6ZR54 194 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 Q6ZS92 163 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 BPIFA4PQ86YQ2 179 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 OR10P1Q8NGE3 313 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 SCGB1C1Q8TD33 95 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 C10orf105Q8TEF2 133 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 AQP10Q96PS8 301 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 SND1-IT1Q9HBX3 110 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 DCHS1Q96JQ0 3298 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 C7orf66A4D0T2 115 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 H3BRM9 83 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 PLA2G10O15496 165 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 SNCGO76070 127 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 HBBP68871 147 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 SPATA45Q537H7 98 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 XAF1Q6GPH4 301 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 GPHB5Q86YW7 130 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 RNASE6Q93091 150 aaKnown RBP2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 MUCL1Q96DR8 90 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 ABHD14BQ96IU4 210 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 C2orf50Q96LR7 162 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 PRELID3AQ96N28 172 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 FAM60AQ9NP50 221 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 OR5V1Q9UGF6 321 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 ZNF222Q9UK12 451 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 SPCS1Q9Y6A9 102 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 SERP1Q9Y6X1 66 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 PLIN4Q96Q06 1357 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 ANKRD12Q6UB98 2062 aa2.77□□□□□ -1.97
CDC42BPA-207ENST00000441725 ASH1LQ9NR48 2969 aaKnown RBP2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 AGRNO00468 2067 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 NUP214P35658 2090 aaPredicted RBP2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 IGHV3-66A0A0C4DH42 116 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 IGHV3-64DA0A0J9YX35 117 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 TRBV27A0A0K0K1C4 114 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 BUB1B-PAK6H3BSN5 160 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 GNGT2O14610 69 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 OR1I1O60431 355 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 LY6G6DO95868 133 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 ZNF823P16415 610 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 LAIR2Q6ISS4 152 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 FP248Q71RG6 208 aaPredicted RBP2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 PHF5AQ7RTV0 110 aaKnown RBP2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 OR10AG1Q8NH19 301 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 IMMP2LQ96T52 175 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 KRTAP2-2Q9BYT5 123 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 TANC2Q9HCD6 1990 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 RGPD5Q99666 1765 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 NAV2Q8IVL1 2488 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 DOCK2Q92608 1830 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 DOT1LQ8TEK3 1739 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 IGLV11-55A0A075B6I3 123 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 TRAV19A0A0A6YYK7 116 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 C11orf94C9JXX5 98 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 IGLV3-27P01718 113 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 C1QAP02745 245 aa2.76□□□□□ -1.97
CDC42BPA-207ENST00000441725 RBP4P02753 201 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 322 ms