RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 RNF125Q96EQ8 232 aa11.07□□□□□ -0.64
LIMD1-202ENST00000440097 EPDR1Q9UM22 224 aa11.07□□□□□ -0.64
LIMD1-202ENST00000440097 PLP1P60201 277 aa11.06□□□□□ -0.64
LIMD1-202ENST00000440097 C2orf91Q6ZV80 131 aa11.06□□□□□ -0.64
LIMD1-202ENST00000440097 SMIM12Q96EX1 92 aa11.06□□□□□ -0.64
LIMD1-202ENST00000440097 SELENOKQ9Y6D0 94 aa11.06□□□□□ -0.64
LIMD1-202ENST00000440097 IGHV3-35A0A0C4DH35 117 aa11.06□□□□□ -0.64
LIMD1-202ENST00000440097 A8MWL6 223 aa11.06□□□□□ -0.64
LIMD1-202ENST00000440097 TMEM238C9JI98 176 aa11.06□□□□□ -0.64
LIMD1-202ENST00000440097 MSMBP08118 114 aa11.06□□□□□ -0.64
LIMD1-202ENST00000440097 OR5AL1P0C617 328 aa11.06□□□□□ -0.64
LIMD1-202ENST00000440097 IGHV4-38-2P0DP08 117 aa11.06□□□□□ -0.64
LIMD1-202ENST00000440097 FCGR2BP31994 310 aaPredicted RBP11.06□□□□□ -0.64
LIMD1-202ENST00000440097 SRSF1Q07955 248 aaKnown RBP eCLIP11.06□□□□□ -0.64
LIMD1-202ENST00000440097 GAGE10A6NGK3 116 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 EGR2P11161 476 aaPredicted RBP11.05□□□□□ -0.64
LIMD1-202ENST00000440097 GP9P14770 177 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 MYCNOSP40205 109 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 GPR82Q96P67 336 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 FAM231BA6NCW3 169 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 P01737 135 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 CSN3P07498 182 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 PRSS22Q9GZN4 317 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 HIF1ANQ9NWT6 349 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 G3V318 75 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 CHEK1O14757 476 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 COX8AP10176 69 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 LY6EQ16553 131 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 BPIFA4PQ86YQ2 179 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 ZNF491Q8N8L2 437 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 MLST8Q9BVC4 326 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 Q9H3A6 140 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 HSPB8Q9UJY1 196 aa11.05□□□□□ -0.64
LIMD1-202ENST00000440097 IGHV3OR16-8A0A075B7F1 116 aa11.04□□□□□ -0.64
LIMD1-202ENST00000440097 LINC01548A6NM66 108 aa11.04□□□□□ -0.64
LIMD1-202ENST00000440097 SCGB2A1O75556 95 aa11.04□□□□□ -0.64
LIMD1-202ENST00000440097 C15orf32Q32M92 178 aa11.04□□□□□ -0.64
LIMD1-202ENST00000440097 LINC01545Q5VT33 79 aa11.04□□□□□ -0.64
LIMD1-202ENST00000440097 NDFIP1Q9BT67 221 aa11.04□□□□□ -0.64
LIMD1-202ENST00000440097 SOX21Q9Y651 276 aaPredicted RBP11.04□□□□□ -0.64
LIMD1-202ENST00000440097 CREBBPQ92793 2442 aa11.04□□□□□ -0.64
LIMD1-202ENST00000440097 PRB4P10163 310 aaPredicted RBP11.04□□□□□ -0.64
LIMD1-202ENST00000440097 TMEM97Q5BJF2 176 aa11.04□□□□□ -0.64
LIMD1-202ENST00000440097 RBPMS2Q6ZRY4 209 aaKnown RBP11.04□□□□□ -0.64
LIMD1-202ENST00000440097 FER1L6-AS1Q8NA97 138 aa11.04□□□□□ -0.64
LIMD1-202ENST00000440097 LINC00527Q9UJ94 153 aa11.04□□□□□ -0.64
LIMD1-202ENST00000440097 KLF12Q9Y4X4 402 aa11.04□□□□□ -0.64
LIMD1-202ENST00000440097 C19orf71A6NCJ1 209 aa11.03□□□□□ -0.64
LIMD1-202ENST00000440097 SETD2Q9BYW2 2564 aaPredicted RBP11.03□□□□□ -0.64
LIMD1-202ENST00000440097 CT83Q5H943 113 aa11.03□□□□□ -0.64
LIMD1-202ENST00000440097 EXOC3-AS1Q8N2X6 119 aa11.03□□□□□ -0.64
LIMD1-202ENST00000440097 MAPK1IP1LQ8NDC0 245 aa11.03□□□□□ -0.64
LIMD1-202ENST00000440097 B4DSR2 109 aa11.02□□□□□ -0.64
LIMD1-202ENST00000440097 NCR2O95944 276 aa11.02□□□□□ -0.64
LIMD1-202ENST00000440097 UFSP1Q6NVU6 142 aa11.02□□□□□ -0.64
LIMD1-202ENST00000440097 BCL6BQ8N143 479 aaPredicted RBP11.02□□□□□ -0.64
LIMD1-202ENST00000440097 C5orf56Q8N8D9 126 aa11.02□□□□□ -0.64
LIMD1-202ENST00000440097 DAZAP1Q96EP5 407 aaKnown RBP11.02□□□□□ -0.64
LIMD1-202ENST00000440097 JMJD8Q96S16 334 aa11.02□□□□□ -0.64
LIMD1-202ENST00000440097 SHANK2-AS3Q9BTD1 123 aa11.02□□□□□ -0.64
LIMD1-202ENST00000440097 SEC11AP67812 179 aa11.02□□□□□ -0.65
LIMD1-202ENST00000440097 S100A7AQ86SG5 101 aa11.02□□□□□ -0.65
LIMD1-202ENST00000440097 C5orf17Q8NAS9 161 aa11.02□□□□□ -0.65
LIMD1-202ENST00000440097 FAM110DQ8TAY7 271 aaPredicted RBP11.02□□□□□ -0.65
LIMD1-202ENST00000440097 NAA38Q9BRA0 125 aaKnown RBP11.02□□□□□ -0.65
LIMD1-202ENST00000440097 MOB4Q9Y3A3 225 aa11.02□□□□□ -0.65
LIMD1-202ENST00000440097 PRRC2AP48634 2157 aaKnown RBP11.02□□□□□ -0.65
LIMD1-202ENST00000440097 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.01□□□□□ -0.65
LIMD1-202ENST00000440097 ZNF492Q9P255 531 aa11.01□□□□□ -0.65
LIMD1-202ENST00000440097 TEX15Q9BXT5 2789 aa11.01□□□□□ -0.65
LIMD1-202ENST00000440097 F8W735 103 aaPredicted RBP11.01□□□□□ -0.65
LIMD1-202ENST00000440097 H3BUX3 64 aa11.01□□□□□ -0.65
LIMD1-202ENST00000440097 LTAP01374 205 aa11.01□□□□□ -0.65
LIMD1-202ENST00000440097 C17orf77Q96MU5 243 aa11.01□□□□□ -0.65
LIMD1-202ENST00000440097 GFRA4Q9GZZ7 299 aa11.01□□□□□ -0.65
LIMD1-202ENST00000440097 H3BRN7 92 aa11□□□□□ -0.65
LIMD1-202ENST00000440097 DSCR9P59020 149 aa11□□□□□ -0.65
LIMD1-202ENST00000440097 GTF2H5Q6ZYL4 71 aa11□□□□□ -0.65
LIMD1-202ENST00000440097 FMC1Q96HJ9 113 aa11□□□□□ -0.65
LIMD1-202ENST00000440097 AP1S3Q96PC3 154 aa11□□□□□ -0.65
LIMD1-202ENST00000440097 APOHP02749 345 aaPredicted RBP11□□□□□ -0.65
LIMD1-202ENST00000440097 CLEC3BP05452 202 aa11□□□□□ -0.65
LIMD1-202ENST00000440097 CTSGP08311 255 aa11□□□□□ -0.65
LIMD1-202ENST00000440097 ZNF747Q9BV97 191 aa11□□□□□ -0.65
LIMD1-202ENST00000440097 TMEM14CQ9P0S9 112 aa11□□□□□ -0.65
LIMD1-202ENST00000440097 MTORP42345 2549 aa11□□□□□ -0.65
LIMD1-202ENST00000440097 C9orf118A6NHY6 69 aa10.99□□□□□ -0.65
LIMD1-202ENST00000440097 G3V4G9 280 aa10.99□□□□□ -0.65
LIMD1-202ENST00000440097 H3BUT2 72 aa10.99□□□□□ -0.65
LIMD1-202ENST00000440097 TCRAP04437 139 aa10.99□□□□□ -0.65
LIMD1-202ENST00000440097 TRAV8-1A0A0A6YYK1 113 aa10.99□□□□□ -0.65
LIMD1-202ENST00000440097 WI2-2373I1.2A0A1W2PRP0 233 aa10.99□□□□□ -0.65
LIMD1-202ENST00000440097 FGF6P10767 208 aa10.99□□□□□ -0.65
LIMD1-202ENST00000440097 CLEC19AQ6UXS0 136 aa10.99□□□□□ -0.65
LIMD1-202ENST00000440097 GOLT1AQ6ZVE7 132 aa10.99□□□□□ -0.65
LIMD1-202ENST00000440097 Q71RC1 249 aaPredicted RBP10.99□□□□□ -0.65
LIMD1-202ENST00000440097 AP5S1Q9NUS5 200 aa10.99□□□□□ -0.65
LIMD1-202ENST00000440097 RABAC1Q9UI14 185 aa10.99□□□□□ -0.65
LIMD1-202ENST00000440097 HAX1O00165 279 aa10.99□□□□□ -0.65
LIMD1-202ENST00000440097 TCTAP57738 103 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms